prot_P-littoralis_Contig210.55.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig210.55.2
Unique Name	prot_P-littoralis_Contig210.55.2
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	269

Homology

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BLAST of mRNA_P-littoralis_Contig210.55.2 vs. uniprot
Match: D8LAX3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX3_ECTSI)

HSP 1 Score: 244 bits (622), Expect = 7.660e-78
Identity = 140/225 (62.22%), Postives = 156/225 (69.33%), Query Frame = 0

Query:   44 RVPDPSEVLHTRRGGSMDPHTRLPGYTCSTVLGVTQVWFAAHHVGHVLKTLRSGRLDELHRRASKQAARNPHVLDARVCRAVLWWSILGEAMDAAKEAERRXXXXXXXXXLVVVLAVSQRRGISNSCSSRSNXXXSNASTQRGLGTPPSGLPRLPSRTWSLPPLTXXXXXXXXXXXXXXXXXXXXXXGRAPCHGGESTPAAAVVRGYQSVHLDEAAILSKIYDYL 268
            RVPDPSEV  TRRGG+MDPHTRLPGYTCST+LGVTQVWF AHHVGHVLKTLRSGRLD+LHRR      RNPHVLDARVCRAV+WWSIL EAM+AAKEAERR  XX     LVV LAVSQRR    +   ++    S    QR  G   SG+ R  SRTWSLPPLT                      GRAPCHGG +  A +VVR  ++VHLDEAAIL+KIY++L
Sbjct:    9 RVPDPSEVFQTRRGGAMDPHTRLPGYTCSTMLGVTQVWFTAHHVGHVLKTLRSGRLDDLHRRMK----RNPHVLDARVCRAVIWWSILAEAMEAAKEAERRRAXXRECRRLVVGLAVSQRRSDPGTRRGKT----STHEQQRASGGSRSGMSRSSSRTWSLPPLTEAIHLKGGEEDQGFSSGGG---GRAPCHGG-AVAAPSVVRECRAVHLDEAAILNKIYEFL 221

[Close]

BLAST of mRNA_P-littoralis_Contig210.55.2 vs. uniprot
Match: A0A6H5JYH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYH9_9PHAE)

HSP 1 Score: 191 bits (484), Expect = 4.410e-57
Identity = 121/224 (54.02%), Postives = 139/224 (62.05%), Query Frame = 0

Query:   60 MDPHTRLPGYTCSTVLGVTQV---------------WFAAHHVGHVLKTLRSGRLDELHRRASKQAARNPHVLDARVCRAVLWWSILGEAMDAAKEAERRXXXXXXXXXLVVVLAVSQRRGISNSCSSRSNXXXSNASTQRGLGTPPSGLPRLPSRTWSLPPLTXXXXXXXXXXXXXXXXXXXXXXGRAPCHGGESTPAAAVVRGYQSVHLDEAAILSKIYDYL 268
            MDPHTRLPGYTCST+LGVTQV               WF AHHVGHVLKTLRSGRLD+LHRR      RNPHVLDARVCRAV+WWSIL EAM+AAKE    XXXXX    LVV LAVSQRR   +   +R     ++   +   G+  SG+ R  SRTWSLPPLT                       RAPCHGG +  A   VR  ++VHLDEAAIL+K+Y++L
Sbjct:    1 MDPHTRLPGYTCSTMLGVTQVIDGSHQATSDLAPDVWFTAHHVGHVLKTLRSGRLDDLHRRMK----RNPHVLDARVCRAVIWWSILAEAMEAAKEXXXXXXXXXECRRLVVGLAVSQRR---SDPGTRRGKTFTHEQQRASGGSSRSGMSRSSSRTWSLPPLTDATHLKGGEEDQGVSSGGGW---RAPCHGG-AVAAPPAVRECRAVHLDEAAILNKVYEFL 213

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig210.55.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig210.55.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LAX3_ECTSI	7.660e-78	62.22	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JYH9_9PHAE	4.410e-57	54.02	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..237
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..201

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig210	contig	P-littoralis_Contig210:324687..328486 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig210.55.2	mRNA_P-littoralis_Contig210.55.2	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig210 324657..328486 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig210.55.2 ID=prot_P-littoralis_Contig210.55.2|Name=mRNA_P-littoralis_Contig210.55.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=269bp
MCVCLPIHRHRYHGLAQSRAETTPRSIEMCTPSGRKVMNRGSFRVPDPSE
VLHTRRGGSMDPHTRLPGYTCSTVLGVTQVWFAAHHVGHVLKTLRSGRLD
ELHRRASKQAARNPHVLDARVCRAVLWWSILGEAMDAAKEAERRRAKRRE
SRRLVVVLAVSQRRGISNSCSSRSNSSSSNASTQRGLGTPPSGLPRLPSR
TWSLPPLTTAAAAAAAASSGGGGGGGGGDGGRAPCHGGESTPAAAVVRGY
QSVHLDEAAILSKIYDYL*