prot_P-littoralis_Contig205.59.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig205.59.1
Unique Nameprot_P-littoralis_Contig205.59.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length301
Homology
BLAST of mRNA_P-littoralis_Contig205.59.1 vs. uniprot
Match: A0A6H5KC34_9PHAE (TFIIF_beta domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC34_9PHAE)

HSP 1 Score: 506 bits (1303), Expect = 1.100e-179
Identity = 257/282 (91.13%), Postives = 272/282 (96.45%), Query Frame = 0
Query:    1 MAWRREQELERVGIDEPEAPRKVPKNEVSLDNANDPCWLVKCTPSVWKAWEGLEEGAKLGELVVKTVKRKKPDGSVVEEQTMQVKPGGLVTHFKGGAKAKLGDYWLSTERNIEDAVAFTRPKTGTTGSTAIVSTIKRQYLMQPEVGPAYTKVVKTRLVANTIKARTTEPVAMSEVYKAARDNMTRKGTAFDSAFHAAQQAKLEAKGEGNKGSREKLEHDELRSRLFGLFAKKDVYMLKELNKELQQSEKYLREMLQEIARMHTSGPHRNCWELKPEFKTSGE 282
            M+WRREQELERVGIDEPEAPRKVPKNEVSLD AND CWLVKCTPSVWKAWEGLEEGAKLGELVVKTVKRKKPDGS+VEEQTMQVKPGG+VTHFKGGAKAKLGDYWLSTERNIED++AFTRPK+GTTG+TAIVSTIKRQYLMQPEVG AYTKVVKTRLVANTIKARTTEPVAMSEV+KAARDNM RKGTAFD+AFHAAQQAKLEAKGEGNKGSREKLE  ELRSRLF LFAKK+VYMLKELN+ELQQ+EK+LR+ L EIARMHTSGPHRN WELKPEFKT+GE
Sbjct:    1 MSWRREQELERVGIDEPEAPRKVPKNEVSLDRANDACWLVKCTPSVWKAWEGLEEGAKLGELVVKTVKRKKPDGSIVEEQTMQVKPGGMVTHFKGGAKAKLGDYWLSTERNIEDSLAFTRPKSGTTGTTAIVSTIKRQYLMQPEVGSAYTKVVKTRLVANTIKARTTEPVAMSEVHKAARDNMNRKGTAFDAAFHAAQQAKLEAKGEGNKGSREKLEPGELRSRLFKLFAKKNVYMLKELNRELQQAEKHLRDGLMEIARMHTSGPHRNYWELKPEFKTAGE 282          
BLAST of mRNA_P-littoralis_Contig205.59.1 vs. uniprot
Match: D7FLP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLP8_ECTSI)

HSP 1 Score: 373 bits (958), Expect = 1.410e-128
Identity = 185/199 (92.96%), Postives = 194/199 (97.49%), Query Frame = 0
Query:    1 MAWRREQELERVGIDEPEAPRKVPKNEVSLDNANDPCWLVKCTPSVWKAWEGLEEGAKLGELVVKTVKRKKPDGSVVEEQTMQVKPGGLVTHFKGGAKAKLGDYWLSTERNIEDAVAFTRPKTGTTGSTAIVSTIKRQYLMQPEVGPAYTKVVKTRLVANTIKARTTEPVAMSEVYKAARDNMTRKGTAFDSAFHAAQQ 199
            M+WRREQELERVGIDEPEAPRKVPKNEVSLD AND CWLVKCTPSVWKAWEGLEEGAKLGELVVKTVKRKKPDGS+VEEQTMQVKPGG+VTHFKGGAKAKLGDYWLSTERNIED++AFTRPK+G TG+TAIVSTIKRQYLMQPEVG AYTKVVKTRLVANTIKARTTEPVAMSEV+KAARDNM RKGTAFD+AFHAAQQ
Sbjct:    1 MSWRREQELERVGIDEPEAPRKVPKNEVSLDRANDACWLVKCTPSVWKAWEGLEEGAKLGELVVKTVKRKKPDGSIVEEQTMQVKPGGMVTHFKGGAKAKLGDYWLSTERNIEDSLAFTRPKSGATGTTAIVSTIKRQYLMQPEVGSAYTKVVKTRLVANTIKARTTEPVAMSEVHKAARDNMNRKGTAFDAAFHAAQQ 199          
BLAST of mRNA_P-littoralis_Contig205.59.1 vs. uniprot
Match: A0A835YI82_9STRA (Transcription initiation factor IIF, beta subunit-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI82_9STRA)

HSP 1 Score: 131 bits (329), Expect = 2.420e-32
Identity = 93/284 (32.75%), Postives = 140/284 (49.30%), Query Frame = 0
Query:   13 GIDEPEAPRKVPKNEVSLDNANDP-------CWLVKCTPSVWKAWEGLEEGAKLGELVVKTVKRKKPDGSVVEEQTMQVKPGGLVTHFKGGAKAKLGDYWLSTERNIEDAVAFTRPKTGTT--GSTAIVSTIKRQYLMQPEVGPAYTKVVKTRLVANTIKARTTEPVAMSEVYKAARDNMTRKGTAFDSAFHAAQQAKLE--------AKGEGNKGSREKLEHDELRSRLFGLFAKKDVYMLKELNKELQQSEKYLREMLQEIARMHTSGPHRNCWELKPEFKT 279
            G +E    RKV +  + L N            WLVK  P+V+ AWE ++EG  LG LVVK             E  ++V+  G+ T   GG K  L DY L   R + D + F++   G    G  ++ +T+ R Y MQP  G +Y K+++ R+VA T+K    + V         R +   +   FD A    ++ + +          GE   G + K +   LR RLF +F +++ +  KELN  L Q + +L+ +L+EI+ MH SGPHRN +ELK E+KT
Sbjct:   34 GCEEELGDRKVQRTMLDLSNITGEGGSVGRQMWLVKVPPAVYNAWEHVDEGGDLGRLVVKR--------DAAGEDVLEVQMAGITTQVSGGKKVGLPDYTLKGMRQVTDGLVFSQSAAGLRRGGGASMDATVVRSYNMQPISGQSYQKLMQNRMVAATVKQ---DYVRRLGDLPQKRPDGQHERHIFDVAVEEDKRRRADHIGAAVGMGGGESMGGKKIKTDRGVLRGRLFEMFGQQERWAFKELNAHLNQPDDHLKGVLREISEMHRSGPHRNQYELKAEYKT 306          
BLAST of mRNA_P-littoralis_Contig205.59.1 vs. uniprot
Match: A0A7S4D8I2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8I2_HETAK)

HSP 1 Score: 83.2 bits (204), Expect = 7.650e-15
Identity = 78/269 (29.00%), Postives = 128/269 (47.58%), Query Frame = 0
Query:   18 EAPRKVPKNEVS-LDNA--NDPCWLVKCTPSVWKAWEGLEEGAKLGELVVKTVKRKKPDGSVVEEQTMQVKPGGLVTHFKGGAKAKLGDYWLSTERNIEDAVAFTRPKTGTTGSTAIVSTIKRQYLMQPEVGPAYTKVVKTRLVANTIKARTTEPVAMSEVYKAARDNMTRKGTAFDSAFHAAQQAKLEAKGE---GNKGSREKLEHDELRSRLFGLFAKKDVYMLKELNKELQQSEKYLREMLQEIARMHTSGPHRNCWELKPEFKTS 280
            E  +K+ K+ V  LD++  +   WLVK    V + W+   +G  LG L +K V     +GS   E ++++    L T +        G   L+   N ++               A+  T+ R + ++P    AY K+ ++RL+      RT +P+  SE+ K         G   +S F  + + K     +    +K  + +LE  ELRS LF  F +K+ + L ELN+ELQQ E++L ++LQEI       P R  WELKPE++++
Sbjct:   22 EVVKKLTKDVVKPLDSSKTSKQLWLVKIPAPVAEQWDTARDGELLGSLTLKKV-----EGSNKPEFSIEM--NNLPTKYSLEQMPDAGSKMLAFSHNDDEV--------------AVDGTVTRAFSLRPLRDAAYHKMCRSRLIKALKPKRTIKPLDDSELRKPG------VGAGVNSMFDFSGKGKKRNSADFFGDHKPKKIRLEKAELRSLLFARFGEKEAWTLGELNQELQQPERHLGDLLQEIC----VKPRRGLWELKPEYRST 259          
BLAST of mRNA_P-littoralis_Contig205.59.1 vs. uniprot
Match: A0A553PLN7_TIGCA (General transcription factor IIF subunit 2 n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553PLN7_TIGCA)

HSP 1 Score: 66.6 bits (161), Expect = 6.840e-9
Identity = 78/278 (28.06%), Postives = 114/278 (41.01%), Query Frame = 0
Query:   22 KVPKNEVSLDNANDPCWLVKCTPSVWKAWEGLEEGAKLGELVVKTVKRKKP------DGSVVEEQTMQVKPGGLVTHFKGGAKA--KLGDYWLSTERNIEDAVAFTRPKTGTTGSTAIVSTIKRQYLMQPEVGPAYTKVVKTRLVANTIKART-TEPVAMS---EVYKAARDNMTRKGTAFDSAF--------HAAQQAK-LEAKGEGNKGSREKLEHDELRSRLFGLFAKKDVYMLKELNKELQQSEKYLREMLQEIARMHTSGPHRNCWELKPEFK 278
            K    +V L NA    WLV     +   WE   E + +G+L +       P      D SV+    + V  GG  +  KG  K   K   + ++T  +   AV       G+   T    T          +GP   K+     V    + R     + MS   E Y  A +  TR+    D A         HA   A  L+ K EG K   +K   +++   LF LF K   Y +K+L KE +Q   YL+E+L+E+   +   PH+N WELKPE++
Sbjct:   28 KKSDKDVDLVNACRGVWLVNVPKYIADRWENCPENSNVGKLKIARRTNATPVVSFSLDDSVIAATPVGVAKGGPSSMSKGSQKEIPKEHKFVVNTLNSQTLAVLSHSSAAGSEALTGPGGT---------PIGPVLDKLAVEGKVVQRAECRPINNHIYMSLKKEAYLKAIEP-TRQTKHLDKAVMAYKPKANHAVNIANDLKKKSEGKKSRDDK---EKVMETLFALFEKHQYYNIKDLVKETRQPVTYLKEILKEVCNYNLKNPHKNMWELKPEYR 292          
BLAST of mRNA_P-littoralis_Contig205.59.1 vs. uniprot
Match: UPI00193AB054 (general transcription factor IIF subunit 2-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193AB054)

HSP 1 Score: 61.2 bits (147), Expect = 2.930e-7
Identity = 69/267 (25.84%), Postives = 114/267 (42.70%), Query Frame = 0
Query:   19 APRKVPKNEVSLDNANDPCWLVKCTPSVWKAWEGLEEGAKLGELVV-KTVKRKKPDGSVVEEQTMQ--VKPGGLVTHFKGGAKAKLGDYWLSTERNIEDAVAFTRPKTGTTGST--AIVSTIKRQYLMQPEVGPAYTKVVKTRLVANTIKARTTEPV--AMSEVYKAARDNMTRKGTAFDSAFHAAQQAKLEAKGEGNKGSREKLEHDELRSRLFGLFAKKDVYMLKELNKELQQSEKYLREMLQEIARMHTSGPHRNCWELKPEFK 278
            A ++    E+    A    WLVK    +   W+    G  +G+L + KT+ R +   ++ E    +       + T  K         + L    N   AV    P  G  GS   AI   I ++    P+ G  Y K+  T+ V  T   RT + +  A+  VYK                   A   + +A+G+  +GS+E     ++ ++LF  F K   Y +++L K  +Q   +L+E+L+EI   +   PH+N WELKPE++
Sbjct:    2 ADKEEDNAELDCTGAKHSVWLVKVPKYLATIWKEAPGGQPVGKLRIGKTMGRTQVSFNLDESLAKEHPTSKDSVPTEHK---------FSLQGMGNQSLAVFSQIPGVGPGGSEKRAIEGRIVQKADCMPQGGQKYMKLKMTQFVVATKPTRTVKQLDTAVRSVYKPVSRIQE----------EIANDKRQKAEGKRIRGSKE-----QVMAKLFEAFEKHQFYSIQDLGKITKQPITFLKEILREIGHYNLKNPHKNMWELKPEYR 244          
BLAST of mRNA_P-littoralis_Contig205.59.1 vs. uniprot
Match: A0A6P8IEZ1_ACTTE (General transcription factor IIF subunit 2 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IEZ1_ACTTE)

HSP 1 Score: 61.2 bits (147), Expect = 3.070e-7
Identity = 63/263 (23.95%), Postives = 114/263 (43.35%), Query Frame = 0
Query:   26 NEVSLDNANDPCWLVKCTPSVWKAW-EGLEEGAKLGELVVKTVKRKKPDGSVVEEQTMQVKPGGLVTHFKGGAKAKL-GDYWLSTERNIEDAVAFTRPKTGTT-----GSTAIVSTIKRQYLMQPEVGPAYTKVVKTRLVANTIKARTTEPVAMSEVYKAARDNMTRKGTAFDSAFHAAQQAKLEA---KGEGNKGSREKLEHDELRSRLFGLFAKKDVYMLKELNKELQQSEKYLREMLQEIARMHTSGPHRNCWELKPEFK 278
            NEV     +   WLVK    +  +W E  ++   +G L +    +K        E T  +    L +   G  K K+  DY L   +  +  V F++  TG+         A   +++ + + + +  P ++      L   +I   + +P+  ++  K          T   S++      K+     K +  +G R ++  DE++++LF  F +   Y LK+L     Q   YL+ +L+EIA  +T  PH+N WELKPE++
Sbjct:    6 NEVDCTGLSRDVWLVKVPKHLSTSWMENTDKSGIVGSLRISKNTQK-------NEITFNLSES-LASGSDGNEKPKIPSDYKLLMSKVDQSLVVFSQGPTGSADEPDESEPADKVSLEGKVVQRADFRPVHSNAEYLSLKRQSILTAS-KPMRQAKQLK----------TVVTSSYKPVSDHKMNIDYDKKKKEEGKRARIAEDEVKAKLFHAFGQHQYYNLKDLVNITNQPIIYLKSILKEIAHYNTKNPHKNMWELKPEYR 249          
BLAST of mRNA_P-littoralis_Contig205.59.1 vs. uniprot
Match: C1BZX1_CALCM (General transcription factor IIF subunit 2 n=5 Tax=Caligidae TaxID=72034 RepID=C1BZX1_CALCM)

HSP 1 Score: 60.8 bits (146), Expect = 4.670e-7
Identity = 68/267 (25.47%), Postives = 110/267 (41.20%), Query Frame = 0
Query:   20 PRKVPKNEVSLDNANDPCWLVKCTPSVWKAWEGLEEGAKLGELVVKTVKRKKPDGSVVEEQTMQVKPGGLVTHFKGGAKAKLGDYWLSTERNIEDAVAFTRPKTGTTGSTAIVSTIKRQYLMQPEVGPAYTKVVKTRLVANTIKARTTEPVAMSEVYKAARDNMTRKGTAFDSAF--------HAAQQAKLEAKGEGNKGSREKLEHDELRSRLFGLFAKKDVYMLKELNKELQQSEKYLREMLQEIARMHTSGPHRNCWELKPEFK 278
            P K+   ++  +N     WLVK    +   WE   +   +G+L +    R KPD S   +         +V   +G  ++K      ST + I     F         +  + S +       P+      +VVK +     I  +T   V    + KA     TR+    D A         HAA       K E  K SR+  + +++  RLF LF K   Y +K+L +E +Q   +L+E+L+ +   +   PH+N WELKPE++
Sbjct:    5 PAKISDKDLFTENRKRGVWLVKVPKYISDRWEKAPDNEVVGKLRIVKRARAKPDVSFSLDDK-------IVAKREGTPESK-----TSTNQAIPKQHKFIVSNV-MAQTLGVFSRLTSSASEGPDRVSLEGRVVK-KAECRPISDKTYMSVKREAILKAIEP--TRQTVQLDRAVNHYKPISNHAANIEHARRKKEEGKKSRD--DKEKVMERLFALFEKHQYYNIKDLVRETRQPITHLKEVLKGVCNYNLKNPHKNMWELKPEYR 253          
BLAST of mRNA_P-littoralis_Contig205.59.1 vs. uniprot
Match: UPI000644FC6C (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644FC6C)

HSP 1 Score: 60.5 bits (145), Expect = 4.770e-7
Identity = 62/258 (24.03%), Postives = 111/258 (43.02%), Query Frame = 0
Query:   27 EVSLDNANDPCWLVKCTPSVWKAWEGLEEGAKLGELVVKTVKR-----KKPDGSVVEEQTMQVKPGGLVTHFKGGAKAKLGDYWLSTERNIEDAVAFTRPKTGTTGSTAIVSTIKRQYLMQPEVGPAYTKVVKTRLVANTIKARTTEPVA-MSEVYKAARDNMTRKGTAFDSAFHAAQQAKLEAKGEGNKGSREKLEHDELRSRLFGLFAKKDVYMLKELNKELQQSEKYLREMLQEIARMHTSGPHRNCWELKPEFK 278
            E++ D  +   WL+K    +   W     G+++G+L  K+         +  G   EE  +   P       K           + +E + E+A+AF        GS  +   ++   L Q      Y ++++ R      K R  +P+   S V K    N   K     + ++  ++   E K       RE+++ D+L   +F  F +K  + LK+L    +Q + +L+++L++I   H  G HRNC+E+KPEFK
Sbjct:   12 EINTDQVDQQAWLIKIPKYLADHWMNAGGGSEIGKLYFKSANDLSLSIARASGGSSEEFQLTTTPLNEANPLK-----------IFSE-DSENALAFD-------GSIGLRCDVQMDILSQ-----TYRELMQKRNTMANTKTRQLKPLQDQSSVVKMMHQNS--KPQISTAIYNKDKKKSQEEK-------RERMQEDDLTDLIFKAFEEKSYWTLKDLLVYTEQPQVWLKQVLEKICDFHKKGSHRNCYEVKPEFK 236          
BLAST of mRNA_P-littoralis_Contig205.59.1 vs. uniprot
Match: UPI001EB02A8D (general transcription factor IIF subunit 2-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB02A8D)

HSP 1 Score: 59.7 bits (143), Expect = 1.040e-6
Identity = 68/266 (25.56%), Postives = 118/266 (44.36%), Query Frame = 0
Query:   27 EVSLDNANDPCWLVKCTPSVWKAWEGLEEGAKLGELVVKTVKRK--KPDGSVVEEQTM-QVKPGGLVTHFKGGAKAKLGDYWLSTERNIEDAVA------FTRPKTGTTGS-----TAIVSTIKRQYLMQPEVGPAYTKVVKTRLVANTIKARTTEPVAMSEVYKAARDNMTRKGTAFDSAFHAAQQAKLEAKGEGNKGSREKLEHDELRSRLFGLFAKKDVYMLKELNKELQQSEKYLREMLQEIARMHTSGPHRNCWELKPEFK 278
            EV L  A    WLVK    + + W+  + G+++G+L +   K    KPD      +TM +V+PG         A+A     ++ T   +++ V       F +   G T        A+   + ++   +P     Y K+ +          R  E + +S V ++ +       +A+ S     ++ K E+K       R +L+ ++++  LF  F K   Y +K+L K   Q   YL+E+L+EI   +   PHRN WELKPE++
Sbjct:   12 EVDLSAAPRGVWLVKVPKYLSERWQKAQGGSEVGKLRITRPKSPGLKPDVMFSSHETMMKVEPGQ--------AQAPRDHKFVLTGVGVQNLVVMSQTPIFAKDGNGATKEKVAERVAVEGKVLQRAECRPIADDNYNKLKRLHWEIQNKPKR--EVIQLSGVVQSYKPR-----SAYAS-LDGDKRKKEESK-------RSRLDREKVQDMLFNAFEKHQYYNVKDLVKITNQPVPYLKEILKEICTYNMKAPHRNMWELKPEYR 254          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig205.59.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KC34_9PHAE1.100e-17991.13TFIIF_beta domain-containing protein (Fragment) n=... [more]
D7FLP8_ECTSI1.410e-12892.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YI82_9STRA2.420e-3232.75Transcription initiation factor IIF, beta subunit-... [more]
A0A7S4D8I2_HETAK7.650e-1529.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A553PLN7_TIGCA6.840e-928.06General transcription factor IIF subunit 2 n=1 Tax... [more]
UPI00193AB0542.930e-725.84general transcription factor IIF subunit 2-like n=... [more]
A0A6P8IEZ1_ACTTE3.070e-723.95General transcription factor IIF subunit 2 n=1 Tax... [more]
C1BZX1_CALCM4.670e-725.47General transcription factor IIF subunit 2 n=5 Tax... [more]
UPI000644FC6C4.770e-724.03hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
UPI001EB02A8D1.040e-625.56general transcription factor IIF subunit 2-like n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 237..257
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 266..300
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePANTHERPTHR10445:SF0GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2coord: 14..285
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 213..279
e-value: 7.4E-21
score: 76.0
IPR040450TFIIF beta subunit, HTH domainPFAMPF02270TFIIF_betacoord: 216..278
e-value: 1.4E-20
score: 73.2
IPR003196Transcription initiation factor IIF, beta subunitPANTHERPTHR10445GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2coord: 14..285
IPR011039Transcription Factor IIF, Rap30/Rap74, interactionSUPERFAMILY50916Rap30/74 interaction domainscoord: 25..66
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 215..279

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig205contigP-littoralis_Contig205:336479..348701 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig205.59.1mRNA_P-littoralis_Contig205.59.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig205 336294..349671 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig205.59.1 ID=prot_P-littoralis_Contig205.59.1|Name=mRNA_P-littoralis_Contig205.59.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=301bp
MAWRREQELERVGIDEPEAPRKVPKNEVSLDNANDPCWLVKCTPSVWKAW
EGLEEGAKLGELVVKTVKRKKPDGSVVEEQTMQVKPGGLVTHFKGGAKAK
LGDYWLSTERNIEDAVAFTRPKTGTTGSTAIVSTIKRQYLMQPEVGPAYT
KVVKTRLVANTIKARTTEPVAMSEVYKAARDNMTRKGTAFDSAFHAAQQA
KLEAKGEGNKGSREKLEHDELRSRLFGLFAKKDVYMLKELNKELQQSEKY
LREMLQEIARMHTSGPHRNCWELKPEFKTSGEAPGGGAEGGDAKEPEKDA
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR040450TFIIF_beta_HTH
IPR003196TFIIF_beta
IPR011039TFIIF_interaction
IPR036390WH_DNA-bd_sf