prot_P-littoralis_Contig204.33.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig204.33.1
Unique Nameprot_P-littoralis_Contig204.33.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length223
Homology
BLAST of mRNA_P-littoralis_Contig204.33.1 vs. uniprot
Match: A0A6H5KAS5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS5_9PHAE)

HSP 1 Score: 232 bits (591), Expect = 9.410e-70
Identity = 116/169 (68.64%), Postives = 134/169 (79.29%), Query Frame = 0
Query:   13 TARVGKVKGLRQILFERGLLVDGMSKTGSTRGSKPNE-ALSMMAVYGKQLDFKNVDPSLMVLVKRCGGVAIMLPKFHCELNPIELVWGRSKYWVRRHCKYTIQCLRENVTKSYAVEDDRLNLDIVQKYCRKVANFHSVCADKHTGPDAVQRRREYRSHRKPAPSEFINP 180
            T  +GKVKGL+QILFERGL    MS  G  +G +  + AL M AV G Q DF NV+PSLMVLVKR GGVAIMLPKFHCE+NPIELVWGRSKYWVR+HCKYTI CLR NV+KSYAV +DRL+L IVQK+CR VANF+ V  D   G +AVQ+R  ++SHRKPAPSE+INP
Sbjct:  395 TDHIGKVKGLKQILFERGLWNADMSMKGIRKGQQEYDPALCMPAVLGAQEDFANVEPSLMVLVKRHGGVAIMLPKFHCEINPIELVWGRSKYWVRKHCKYTIACLRTNVSKSYAVAEDRLSLAIVQKFCRTVANFNEVYRDGLKGAEAVQKRDTFKSHRKPAPSEYINP 563          
BLAST of mRNA_P-littoralis_Contig204.33.1 vs. uniprot
Match: A0A6H5JEX5_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX5_9PHAE)

HSP 1 Score: 230 bits (586), Expect = 4.070e-68
Identity = 112/168 (66.67%), Postives = 136/168 (80.95%), Query Frame = 0
Query:   13 TARVGKVKGLRQILFERGLLVDGMSKTGSTRGSKPNEALSMMAVYGKQLDFKNVDPSLMVLVKRCGGVAIMLPKFHCELNPIELVWGRSKYWVRRHCKYTIQCLRENVTKSYAVEDDRLNLDIVQKYCRKVANFHSVCADKHTGPDAVQRRREYRSHRKPAPSEFINP 180
            T  VGKVKG++QILFERGL + GM+ +G  +G +PN+ +SM AV   Q DF NVD SL VL+KR GGVA+MLPKFHCELNPIELVWGRSK+WVRR+CKYTI CLRENV+KSY V +  L+LDIVQK+CRKVANFH+V     TG +AV+ + + +SHRKPAPSE+INP
Sbjct:  502 TDHVGKVKGMKQILFERGLWIPGMTMSGGKKGQEPNKKMSMPAVLRAQKDFANVDSSLEVLLKRHGGVALMLPKFHCELNPIELVWGRSKWWVRRNCKYTIACLRENVSKSYGVHN--LSLDIVQKFCRKVANFHAVYDAGLTGAEAVEAQEKCKSHRKPAPSEYINP 667          
BLAST of mRNA_P-littoralis_Contig204.33.1 vs. uniprot
Match: A0A6H5KMH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMH6_9PHAE)

HSP 1 Score: 214 bits (546), Expect = 2.170e-65
Identity = 107/168 (63.69%), Postives = 126/168 (75.00%), Query Frame = 0
Query:   13 TARVGKVKGLRQILFERGLLVDGMSKTGSTRGSKPNEALSMMAVYGKQLDFKNVDPSLMVLVKRCGGVAIMLPKFHCELNPIELVWGRSKYWVRRHCKYTIQCLRENVTKSYAVEDDRLNLDIVQKYCRKVANFHSVCADKHTGPDAVQRRREYRSHRKPAPSEFINP 180
            T  VGKVKG++QILFERGL + G +  G  +G +P   +SM  V   Q DF NVD SL VL+KR GGVA+MLPKFHCELNPIELVWGRSK+WVRR+CKYTI CLRENV+KS+ V  D L+LDIVQK+CRKVANFH+      TG  AV    + +S RKPAPSE+INP
Sbjct:  181 TDHVGKVKGMKQILFERGLWIPGTTVLGGKKGQEPKPKMSMPVVLRAQKDFANVDSSLEVLLKRHGGVALMLPKFHCELNPIELVWGRSKWWVRRNCKYTIACLRENVSKSFRV--DNLSLDIVQKFCRKVANFHAAYDAGLTGAKAVDAHEKCKSDRKPAPSEYINP 346          
BLAST of mRNA_P-littoralis_Contig204.33.1 vs. uniprot
Match: A0A6H5KDP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDP5_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 5.160e-61
Identity = 106/166 (63.86%), Postives = 126/166 (75.90%), Query Frame = 0
Query:   16 VGKVKGLRQILFERGLLVDGMSKTGSTRGS-KPNEALSMMAVYGKQLDFKNVDPSLMVLVKRCGGVAIMLPKFHCELNPIELVWGRSKYWVRRHCKYTIQCLRENVTKSYAVEDDRLNLDIVQKYCRKVANFHSVCADKHTGPDAVQRRREYRSHRKPAPSEFINP 180
            +GK K L+Q+LFERGL    MS  G  +G  K + AL    V+G Q DF +V+PSL+VLVKR  GVAIMLPK H E+NPIELVWGRSKYWVR+HCKYTI CLR NV KSYAV +DRL L IVQK+CR VANF+ V +D   G +AVQ+R  ++SHRKPAPSE+INP
Sbjct:  437 IGKHKRLKQVLFERGLCNADMSMKGIKKGQQKYDPALCTSVVFGTQEDFASVEPSLVVLVKRHEGVAIMLPKLHREINPIELVWGRSKYWVRQHCKYTIACLRTNVNKSYAVAEDRLGLAIVQKFCRTVANFNEVYSDGLQGAEAVQKRDTFKSHRKPAPSEYINP 602          
BLAST of mRNA_P-littoralis_Contig204.33.1 vs. uniprot
Match: A0A6H5KQ48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ48_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 4.340e-60
Identity = 95/145 (65.52%), Postives = 114/145 (78.62%), Query Frame = 0
Query:   36 MSKTGSTRGSKPNEALSMMAVYGKQLDFKNVDPSLMVLVKRCGGVAIMLPKFHCELNPIELVWGRSKYWVRRHCKYTIQCLRENVTKSYAVEDDRLNLDIVQKYCRKVANFHSVCADKHTGPDAVQRRREYRSHRKPAPSEFINP 180
            M+  G  +G +PN  +SM AV   Q DF NVD SL VL+KR GGVA+MLPKFHCELNPIELVWGRSK+WVRR+CKYTI C+RENV+KS+ V  D L+LDIVQK+CRKVANFH+V     TG +AV  + + +SHRKPAPSE+INP
Sbjct:    1 MTVLGGKKGQEPNPKMSMPAVLRAQKDFANVDSSLEVLLKRHGGVALMLPKFHCELNPIELVWGRSKWWVRRNCKYTIACMRENVSKSFRV--DNLSLDIVQKFCRKVANFHAVYDAGLTGAEAVDAQEKCKSHRKPAPSEYINP 143          
BLAST of mRNA_P-littoralis_Contig204.33.1 vs. uniprot
Match: A0A6H5JXQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXQ2_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 2.140e-50
Identity = 85/121 (70.25%), Postives = 100/121 (82.64%), Query Frame = 0
Query:   59 KQLDFKNVDPSLMVLVKRCGGVAIMLPKFHCELNPIELVWGRSKYWVRRHCKYTIQCLRENVTKSYAVEDDRLNLDIVQKYCRKVANFHSVCADKHTGPDAVQRRREYRSHRKPAPSEFIN 179
            KQ DF +V+P+L+VLVKR  GV+IMLPKFHCE+NPIELVWGRSKYWV RHCKYTI CLR NV+K YAV +DRL+L IVQK+CR VANF+ V  D   G +AVQ+R  + SHRKPAPSE+IN
Sbjct:  345 KQEDFASVEPNLVVLVKRHEGVSIMLPKFHCEINPIELVWGRSKYWVWRHCKYTIACLRTNVSKRYAVAEDRLSLAIVQKFCRTVANFNEVYRDGLQGAEAVQKRDTFESHRKPAPSEYIN 465          
BLAST of mRNA_P-littoralis_Contig204.33.1 vs. uniprot
Match: A0A6H5K4T8_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4T8_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 8.710e-50
Identity = 84/163 (51.53%), Postives = 117/163 (71.78%), Query Frame = 0
Query:   16 VGKVKGLRQILFERGLLVDGMSKTGSTRGSKPNEALSMMAVYGKQLDFKNVDPSLMVLVKRCGGVAIMLPKFHCELNPIELVWGRSKYWVRRHCKYTIQCLRENVTKSYAVEDDRLNLDIVQKYCRKVANFHSVCADKHT-GPDAVQRRREYRSHRKPAPSEF 177
            VGK+KG+RQIL+ERGLLV GMSKTG + G K + + SM  V G+Q DFK VD SL++L++R GG  +MLPK+HCE NPIELVWGR+K W R++CKY+++CLR+NV  S+  E DR  + +VQ YC+K      +  +    GP+  +  ++Y+SHR+P P E+
Sbjct:  185 VGKLKGMRQILWERGLLVKGMSKTGGS-GEKQDLSKSMEHVLGEQKDFKEVDSSLVLLMQRHGGACLMLPKYHCECNPIELVWGRAKDWTRKNCKYSLECLRKNVPLSFRPEKDRQAVSVVQGYCKKAYTHALMYRETRVQGPEGKKTYKKYKSHRRPTPKEW 346          
BLAST of mRNA_P-littoralis_Contig204.33.1 vs. uniprot
Match: A0A6H5JH47_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH47_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 2.060e-49
Identity = 83/163 (50.92%), Postives = 116/163 (71.17%), Query Frame = 0
Query:   16 VGKVKGLRQILFERGLLVDGMSKTGSTRGSKPNEALSMMAVYGKQLDFKNVDPSLMVLVKRCGGVAIMLPKFHCELNPIELVWGRSKYWVRRHCKYTIQCLRENVTKSYAVEDDRLNLDIVQKYCRKVANFHSVCADKHT-GPDAVQRRREYRSHRKPAPSEF 177
            VGK+KG+RQIL+ERGLLV GMSKTG + G K + + SM  V G+Q DFK VD SL++L++R GG  +MLPK+HCE NPIELVWGR+K W R++CKY+++CLR+NV  S+  E DR  + +VQ YC+K      +  +    GP+  +  ++Y+SHR+  P E+
Sbjct:  101 VGKLKGMRQILWERGLLVKGMSKTGGS-GEKQDLSKSMEHVLGEQKDFKEVDSSLVLLMQRHGGACLMLPKYHCEYNPIELVWGRAKDWTRKNCKYSLECLRKNVPLSFRPEKDRQAVSVVQGYCKKAYTHALMYRETRVQGPEGKKTYKKYKSHRRRTPKEW 262          
BLAST of mRNA_P-littoralis_Contig204.33.1 vs. uniprot
Match: A0A6H5JCT5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCT5_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 2.260e-48
Identity = 84/163 (51.53%), Postives = 118/163 (72.39%), Query Frame = 0
Query:   16 VGKVKGLRQILFERGLLVDGMSKTGSTRGSKPNEALSMMAVYGKQLDFKNVDPSLMVLVKRCGGVAIMLPKFHCELNPIELVWGRSKYWVRRHCKYTIQCLRENVTKSYAVEDDRLNLDIVQKYCRKVANFHSVCADKHT-GPDAVQRRREYRSHRKPAPSEF 177
            VGK+KG+RQIL+ERGLLV GMSKTG + G K + + SM  V G+Q DFK VD SL++L++R GG  +MLPK+HCE NPIELVWGR+K W R++CKY+++CLR+NV  S+  E+DR  + +VQ YC+K      +  +    GP+  +  ++Y+SHR+P P E+
Sbjct:  374 VGKLKGMRQILWERGLLVKGMSKTGGS-GEKQDLSKSMEHVLGEQKDFKEVDSSLVLLMQRHGGACLMLPKYHCECNPIELVWGRAKDWTRKNCKYSLKCLRKNVPLSFRPEEDRQAVSVVQGYCKKAYTHALMYRETRVQGPEGKKTYKKYKSHRRPTPKEW 535          
BLAST of mRNA_P-littoralis_Contig204.33.1 vs. uniprot
Match: A0A6H5JX52_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX52_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 7.230e-48
Identity = 88/163 (53.99%), Postives = 117/163 (71.78%), Query Frame = 0
Query:   16 VGKVKGLRQILFERGLLVDGMSKTGSTRGSKPNEALSMMAVYGKQLDFKNVDPSLMVLVKRCGGVAIMLPKFHCELNPIELVWGRSKYWVRRHCKYTIQCLRENVTKSYAVEDDRLNLDIVQKYCRKVANFHSVCAD-KHTGPDAVQRRREYRSHRKPAPSEF 177
            VGK+KG+RQIL+ERGLL DGMSK+G + G+K + ++SM  V G+Q DFK V+ SL +L+ R GG  IMLPK+HCE NPIELVWGR+K W R+HC Y++  LRENV  S+ VE DR  +  VQ YC+K    + V  D +  GP+  +  + Y+SHR+PAPSE+
Sbjct:  759 VGKLKGMRQILWERGLLKDGMSKSGGS-GTKQDLSMSMEHVLGEQKDFKEVESSLALLMARHGGFCIMLPKYHCECNPIELVWGRAKDWTRKHCNYSLDALRENVPLSFRVEPDRQAVGTVQAYCKKSYTHNLVYRDTRAVGPEGEKHYQTYKSHRRPAPSEY 920          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig204.33.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KAS5_9PHAE9.410e-7068.64Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEX5_9PHAE4.070e-6866.67Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KMH6_9PHAE2.170e-6563.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDP5_9PHAE5.160e-6163.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQ48_9PHAE4.340e-6065.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXQ2_9PHAE2.140e-5070.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4T8_9PHAE8.710e-5051.53Uncharacterized protein n=5 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JH47_9PHAE2.060e-4950.92Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCT5_9PHAE2.260e-4851.53Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JX52_9PHAE7.230e-4853.99Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 62..157
e-value: 1.2E-6
score: 30.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig204contigP-littoralis_Contig204:77959..78627 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig204.33.1mRNA_P-littoralis_Contig204.33.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig204 77503..78963 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig204.33.1 ID=prot_P-littoralis_Contig204.33.1|Name=mRNA_P-littoralis_Contig204.33.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=223bp
MRQLRPEEVTPETARVGKVKGLRQILFERGLLVDGMSKTGSTRGSKPNEA
LSMMAVYGKQLDFKNVDPSLMVLVKRCGGVAIMLPKFHCELNPIELVWGR
SKYWVRRHCKYTIQCLRENVTKSYAVEDDRLNLDIVQKYCRKVANFHSVC
ADKHTGPDAVQRRREYRSHRKPAPSEFINPAQVDVRASMQDRTAVVGAFA
NTYTVRASSFVCCRWFGVKHGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf