mRNA_P-littoralis_Contig204.33.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig204.33.1 vs. uniprot
Match: D7G5I2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5I2_ECTSI) HSP 1 Score: 276 bits (707), Expect = 1.470e-88 Identity = 143/154 (92.86%), Postives = 144/154 (93.51%), Query Frame = 2
Query: 32 MSSTFSDETWRCFREKYVSLLGDGSVVNAGLHNKSKSYRIHLVADLPEGVRKEWRSTPIKRPKGRKTGRDRGAEHKFFEDWWPSEGGNVVERLRDSRHRIEAEAEAEVAAARTKRPRDCHVSAAEHERPEKRGGKREGTGRQCGSFGPKKLRQR 493
MSSTFSDETWR FREK VSLLGDGSVV+AGL NKSKSYRIHLVADL EGVRKEWRSTPIKRPKGRKTGRDRGAEHKFFEDW PSEGGNVVERLRDSRHRIEAEAEAEVAAARTKRPRDCH SAAEH RPEKRGGKREG GR GSFGPKKLRQR
Sbjct: 1 MSSTFSDETWRYFREKCVSLLGDGSVVSAGLDNKSKSYRIHLVADLREGVRKEWRSTPIKRPKGRKTGRDRGAEHKFFEDWRPSEGGNVVERLRDSRHRIEAEAEAEVAAARTKRPRDCHASAAEHARPEKRGGKREGAGRPRGSFGPKKLRQR 154
BLAST of mRNA_P-littoralis_Contig204.33.1 vs. uniprot
Match: A0A6H5KAS5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS5_9PHAE) HSP 1 Score: 231 bits (589), Expect = 8.260e-66 Identity = 116/169 (68.64%), Postives = 134/169 (79.29%), Query Frame = 1
Query: 493 TARVGKVKGLRQILFERGLLVDGMSKTGSTRGSKPNE-ALSMMAVYGKQLDFKNVDPSLMVLVKRCGGVAIMLPKFHCELNPIELVWGRSKYWVRRHCKYTIQCLRENVTKSYAVEDDRLNLDIVQKYCRKVANFHSVCADKHTGPDAVQRRREYRSHRKPAPSEFINP 996
T +GKVKGL+QILFERGL MS G +G + + AL M AV G Q DF NV+PSLMVLVKR GGVAIMLPKFHCE+NPIELVWGRSKYWVR+HCKYTI CLR NV+KSYAV +DRL+L IVQK+CR VANF+ V D G +AVQ+R ++SHRKPAPSE+INP
Sbjct: 395 TDHIGKVKGLKQILFERGLWNADMSMKGIRKGQQEYDPALCMPAVLGAQEDFANVEPSLMVLVKRHGGVAIMLPKFHCEINPIELVWGRSKYWVRKHCKYTIACLRTNVSKSYAVAEDRLSLAIVQKFCRTVANFNEVYRDGLKGAEAVQKRDTFKSHRKPAPSEYINP 563
BLAST of mRNA_P-littoralis_Contig204.33.1 vs. uniprot
Match: A0A6H5JEX5_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX5_9PHAE) HSP 1 Score: 229 bits (584), Expect = 3.450e-64 Identity = 112/168 (66.67%), Postives = 136/168 (80.95%), Query Frame = 1
Query: 493 TARVGKVKGLRQILFERGLLVDGMSKTGSTRGSKPNEALSMMAVYGKQLDFKNVDPSLMVLVKRCGGVAIMLPKFHCELNPIELVWGRSKYWVRRHCKYTIQCLRENVTKSYAVEDDRLNLDIVQKYCRKVANFHSVCADKHTGPDAVQRRREYRSHRKPAPSEFINP 996
T VGKVKG++QILFERGL + GM+ +G +G +PN+ +SM AV Q DF NVD SL VL+KR GGVA+MLPKFHCELNPIELVWGRSK+WVRR+CKYTI CLRENV+KSY V + L+LDIVQK+CRKVANFH+V TG +AV+ + + +SHRKPAPSE+INP
Sbjct: 502 TDHVGKVKGMKQILFERGLWIPGMTMSGGKKGQEPNKKMSMPAVLRAQKDFANVDSSLEVLLKRHGGVALMLPKFHCELNPIELVWGRSKWWVRRNCKYTIACLRENVSKSYGVHN--LSLDIVQKFCRKVANFHAVYDAGLTGAEAVEAQEKCKSHRKPAPSEYINP 667
BLAST of mRNA_P-littoralis_Contig204.33.1 vs. uniprot
Match: A0A6H5KMH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMH6_9PHAE) HSP 1 Score: 214 bits (544), Expect = 1.450e-61 Identity = 107/168 (63.69%), Postives = 126/168 (75.00%), Query Frame = 1
Query: 493 TARVGKVKGLRQILFERGLLVDGMSKTGSTRGSKPNEALSMMAVYGKQLDFKNVDPSLMVLVKRCGGVAIMLPKFHCELNPIELVWGRSKYWVRRHCKYTIQCLRENVTKSYAVEDDRLNLDIVQKYCRKVANFHSVCADKHTGPDAVQRRREYRSHRKPAPSEFINP 996
T VGKVKG++QILFERGL + G + G +G +P +SM V Q DF NVD SL VL+KR GGVA+MLPKFHCELNPIELVWGRSK+WVRR+CKYTI CLRENV+KS+ V D L+LDIVQK+CRKVANFH+ TG AV + +S RKPAPSE+INP
Sbjct: 181 TDHVGKVKGMKQILFERGLWIPGTTVLGGKKGQEPKPKMSMPVVLRAQKDFANVDSSLEVLLKRHGGVALMLPKFHCELNPIELVWGRSKWWVRRNCKYTIACLRENVSKSFRV--DNLSLDIVQKFCRKVANFHAAYDAGLTGAKAVDAHEKCKSDRKPAPSEYINP 346
BLAST of mRNA_P-littoralis_Contig204.33.1 vs. uniprot
Match: A0A6H5KDP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDP5_9PHAE) HSP 1 Score: 209 bits (533), Expect = 2.260e-57 Identity = 106/166 (63.86%), Postives = 126/166 (75.90%), Query Frame = 1
Query: 502 VGKVKGLRQILFERGLLVDGMSKTGSTRGS-KPNEALSMMAVYGKQLDFKNVDPSLMVLVKRCGGVAIMLPKFHCELNPIELVWGRSKYWVRRHCKYTIQCLRENVTKSYAVEDDRLNLDIVQKYCRKVANFHSVCADKHTGPDAVQRRREYRSHRKPAPSEFINP 996
+GK K L+Q+LFERGL MS G +G K + AL V+G Q DF +V+PSL+VLVKR GVAIMLPK H E+NPIELVWGRSKYWVR+HCKYTI CLR NV KSYAV +DRL L IVQK+CR VANF+ V +D G +AVQ+R ++SHRKPAPSE+INP
Sbjct: 437 IGKHKRLKQVLFERGLCNADMSMKGIKKGQQKYDPALCTSVVFGTQEDFASVEPSLVVLVKRHEGVAIMLPKLHREINPIELVWGRSKYWVRQHCKYTIACLRTNVNKSYAVAEDRLGLAIVQKFCRTVANFNEVYSDGLQGAEAVQKRDTFKSHRKPAPSEYINP 602
BLAST of mRNA_P-littoralis_Contig204.33.1 vs. uniprot
Match: A0A6H5KQ48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ48_9PHAE) HSP 1 Score: 194 bits (493), Expect = 9.970e-57 Identity = 95/145 (65.52%), Postives = 114/145 (78.62%), Query Frame = 1
Query: 562 MSKTGSTRGSKPNEALSMMAVYGKQLDFKNVDPSLMVLVKRCGGVAIMLPKFHCELNPIELVWGRSKYWVRRHCKYTIQCLRENVTKSYAVEDDRLNLDIVQKYCRKVANFHSVCADKHTGPDAVQRRREYRSHRKPAPSEFINP 996
M+ G +G +PN +SM AV Q DF NVD SL VL+KR GGVA+MLPKFHCELNPIELVWGRSK+WVRR+CKYTI C+RENV+KS+ V D L+LDIVQK+CRKVANFH+V TG +AV + + +SHRKPAPSE+INP
Sbjct: 1 MTVLGGKKGQEPNPKMSMPAVLRAQKDFANVDSSLEVLLKRHGGVALMLPKFHCELNPIELVWGRSKWWVRRNCKYTIACMRENVSKSFRV--DNLSLDIVQKFCRKVANFHAVYDAGLTGAEAVDAQEKCKSHRKPAPSEYINP 143
BLAST of mRNA_P-littoralis_Contig204.33.1 vs. uniprot
Match: A0A6H5JXQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXQ2_9PHAE) HSP 1 Score: 179 bits (454), Expect = 3.530e-47 Identity = 85/121 (70.25%), Postives = 100/121 (82.64%), Query Frame = 1
Query: 631 KQLDFKNVDPSLMVLVKRCGGVAIMLPKFHCELNPIELVWGRSKYWVRRHCKYTIQCLRENVTKSYAVEDDRLNLDIVQKYCRKVANFHSVCADKHTGPDAVQRRREYRSHRKPAPSEFIN 993
KQ DF +V+P+L+VLVKR GV+IMLPKFHCE+NPIELVWGRSKYWV RHCKYTI CLR NV+K YAV +DRL+L IVQK+CR VANF+ V D G +AVQ+R + SHRKPAPSE+IN
Sbjct: 345 KQEDFASVEPNLVVLVKRHEGVSIMLPKFHCEINPIELVWGRSKYWVWRHCKYTIACLRTNVSKRYAVAEDRLSLAIVQKFCRTVANFNEVYRDGLQGAEAVQKRDTFESHRKPAPSEYIN 465
BLAST of mRNA_P-littoralis_Contig204.33.1 vs. uniprot
Match: A0A6H5K4T8_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4T8_9PHAE) HSP 1 Score: 174 bits (441), Expect = 1.780e-46 Identity = 84/163 (51.53%), Postives = 117/163 (71.78%), Query Frame = 1
Query: 502 VGKVKGLRQILFERGLLVDGMSKTGSTRGSKPNEALSMMAVYGKQLDFKNVDPSLMVLVKRCGGVAIMLPKFHCELNPIELVWGRSKYWVRRHCKYTIQCLRENVTKSYAVEDDRLNLDIVQKYCRKVANFHSVCADKHT-GPDAVQRRREYRSHRKPAPSEF 987
VGK+KG+RQIL+ERGLLV GMSKTG + G K + + SM V G+Q DFK VD SL++L++R GG +MLPK+HCE NPIELVWGR+K W R++CKY+++CLR+NV S+ E DR + +VQ YC+K + + GP+ + ++Y+SHR+P P E+
Sbjct: 185 VGKLKGMRQILWERGLLVKGMSKTGGS-GEKQDLSKSMEHVLGEQKDFKEVDSSLVLLMQRHGGACLMLPKYHCECNPIELVWGRAKDWTRKNCKYSLECLRKNVPLSFRPEKDRQAVSVVQGYCKKAYTHALMYRETRVQGPEGKKTYKKYKSHRRPTPKEW 346
BLAST of mRNA_P-littoralis_Contig204.33.1 vs. uniprot
Match: A0A6H5JH47_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH47_9PHAE) HSP 1 Score: 171 bits (432), Expect = 3.840e-46 Identity = 83/163 (50.92%), Postives = 116/163 (71.17%), Query Frame = 1
Query: 502 VGKVKGLRQILFERGLLVDGMSKTGSTRGSKPNEALSMMAVYGKQLDFKNVDPSLMVLVKRCGGVAIMLPKFHCELNPIELVWGRSKYWVRRHCKYTIQCLRENVTKSYAVEDDRLNLDIVQKYCRKVANFHSVCADKHT-GPDAVQRRREYRSHRKPAPSEF 987
VGK+KG+RQIL+ERGLLV GMSKTG + G K + + SM V G+Q DFK VD SL++L++R GG +MLPK+HCE NPIELVWGR+K W R++CKY+++CLR+NV S+ E DR + +VQ YC+K + + GP+ + ++Y+SHR+ P E+
Sbjct: 101 VGKLKGMRQILWERGLLVKGMSKTGGS-GEKQDLSKSMEHVLGEQKDFKEVDSSLVLLMQRHGGACLMLPKYHCEYNPIELVWGRAKDWTRKNCKYSLECLRKNVPLSFRPEKDRQAVSVVQGYCKKAYTHALMYRETRVQGPEGKKTYKKYKSHRRRTPKEW 262
BLAST of mRNA_P-littoralis_Contig204.33.1 vs. uniprot
Match: A0A6H5JCT5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCT5_9PHAE) HSP 1 Score: 175 bits (443), Expect = 4.710e-45 Identity = 84/163 (51.53%), Postives = 118/163 (72.39%), Query Frame = 1
Query: 502 VGKVKGLRQILFERGLLVDGMSKTGSTRGSKPNEALSMMAVYGKQLDFKNVDPSLMVLVKRCGGVAIMLPKFHCELNPIELVWGRSKYWVRRHCKYTIQCLRENVTKSYAVEDDRLNLDIVQKYCRKVANFHSVCADKHT-GPDAVQRRREYRSHRKPAPSEF 987
VGK+KG+RQIL+ERGLLV GMSKTG + G K + + SM V G+Q DFK VD SL++L++R GG +MLPK+HCE NPIELVWGR+K W R++CKY+++CLR+NV S+ E+DR + +VQ YC+K + + GP+ + ++Y+SHR+P P E+
Sbjct: 374 VGKLKGMRQILWERGLLVKGMSKTGGS-GEKQDLSKSMEHVLGEQKDFKEVDSSLVLLMQRHGGACLMLPKYHCECNPIELVWGRAKDWTRKNCKYSLKCLRKNVPLSFRPEEDRQAVSVVQGYCKKAYTHALMYRETRVQGPEGKKTYKKYKSHRRPTPKEW 535 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig204.33.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig204.33.1 >prot_P-littoralis_Contig204.33.1 ID=prot_P-littoralis_Contig204.33.1|Name=mRNA_P-littoralis_Contig204.33.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=223bp MRQLRPEEVTPETARVGKVKGLRQILFERGLLVDGMSKTGSTRGSKPNEAback to top mRNA from alignment at P-littoralis_Contig204:77503..78963+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig204.33.1 ID=mRNA_P-littoralis_Contig204.33.1|Name=mRNA_P-littoralis_Contig204.33.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1461bp|location=Sequence derived from alignment at P-littoralis_Contig204:77503..78963+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig204:77503..78963+ >mRNA_P-littoralis_Contig204.33.1 ID=mRNA_P-littoralis_Contig204.33.1|Name=mRNA_P-littoralis_Contig204.33.1|organism=Pylaiella littoralis U1_48|type=CDS|length=669bp|location=Sequence derived from alignment at P-littoralis_Contig204:77503..78963+ (Pylaiella littoralis U1_48)back to top |