prot_P-littoralis_Contig200.7.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig200.7.1
Unique Nameprot_P-littoralis_Contig200.7.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length206
Homology
BLAST of mRNA_P-littoralis_Contig200.7.1 vs. uniprot
Match: D7G0A4_ECTSI (Rab8A, RAB family GTPase n=2 Tax=Phaeophyceae TaxID=2870 RepID=D7G0A4_ECTSI)

HSP 1 Score: 396 bits (1018), Expect = 2.180e-139
Identity = 200/205 (97.56%), Postives = 202/205 (98.54%), Query Frame = 0
Query:    1 MSRNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRISGNVNLNAQASKKKAGCC 205
            MSRN+SPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPN GSR +GNVNLNAQASKKK GCC
Sbjct:    1 MSRNESPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNPGSRAAGNVNLNAQASKKKTGCC 205          
BLAST of mRNA_P-littoralis_Contig200.7.1 vs. uniprot
Match: A0A836CCB2_9STRA (Rab8A, rab family GTPase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCB2_9STRA)

HSP 1 Score: 349 bits (896), Expect = 8.930e-121
Identity = 177/206 (85.92%), Postives = 192/206 (93.20%), Query Frame = 0
Query:    1 MSRNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRISGNVNLNAQASK-KKAGCC 205
            M+R++SPFDMQIKLLMIGDSGVGKTCLLLRYA+D FSQTFITTIGIDFKIKNI+LD+KR+KLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSF SIRNWVAQIQQHADV VNKILIGNKCD+D +REVS EEGAQLAAEYGIQFFETSAKNDINVEKGFIT+AREVK+RLMADG +QG+R  GNV L+A A   KK+ CC
Sbjct:    1 MARHESPFDMQIKLLMIGDSGVGKTCLLLRYASDHFSQTFITTIGIDFKIKNIELDTKRVKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQSIRNWVAQIQQHADVHVNKILIGNKCDIDNEREVSTEEGAQLAAEYGIQFFETSAKNDINVEKGFITVAREVKNRLMADGGSQGARTQGNVALSAPAKGGKKSSCC 206          
BLAST of mRNA_P-littoralis_Contig200.7.1 vs. uniprot
Match: A0A6H5KYQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYQ5_9PHAE)

HSP 1 Score: 323 bits (829), Expect = 4.710e-111
Identity = 164/167 (98.20%), Postives = 165/167 (98.80%), Query Frame = 0
Query:   39 TFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRISGNVNLNAQASKKKAGCC 205
            TFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSF+SIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPN GSR SGNVNLNAQASKKKAGCC
Sbjct:    8 TFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFSSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNPGSRASGNVNLNAQASKKKAGCC 174          
BLAST of mRNA_P-littoralis_Contig200.7.1 vs. uniprot
Match: K3WPX9_GLOUD (Uncharacterized protein n=28 Tax=Oomycota TaxID=4762 RepID=K3WPX9_GLOUD)

HSP 1 Score: 317 bits (811), Expect = 6.910e-108
Identity = 160/205 (78.05%), Postives = 179/205 (87.32%), Query Frame = 0
Query:    1 MSRNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRISGNVNLNAQASKKKAGCC 205
            M+R+++PFDMQIKLLMIGDSGVGKTCLLLRYANDSFS TFITTIGIDFKIKNI+LD+K++KLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SF SIRNWV QIQQHADV VNKILIGNKCDM +D+ VS EEG  LA EYG++FFETSAKN+INVE GFI IAREVK+RLM +G   G     NVNL+A+ +  K GCC
Sbjct:    1 MARHENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNIELDNKKVKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFQSIRNWVGQIQQHADVHVNKILIGNKCDMTDDKVVSTEEGQALADEYGVKFFETSAKNNINVESGFIEIAREVKNRLMEEG---GPHKKENVNLSAKPAAPKKGCC 202          
BLAST of mRNA_P-littoralis_Contig200.7.1 vs. uniprot
Match: A0A7S4M6F2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4M6F2_9STRA)

HSP 1 Score: 308 bits (790), Expect = 1.250e-104
Identity = 155/206 (75.24%), Postives = 179/206 (86.89%), Query Frame = 0
Query:    1 MSRNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRISG-NVNLNAQASKKKAGCC 205
            MS+  +P+DMQIKLLMIGDSGVGKTCLLLRYANDSFS TFITTIGIDFKIKN+D+D KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD++SF SIRNWV+QIQQHADV VNKIL+GNKCDM +++ VS EEGA+LA E+GI+F+E SAKNDINVE+ FI IAR+VKDRL+ADG    +   G ++N   Q S++  GCC
Sbjct:    1 MSQQSAPYDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNVDIDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVSQIQQHADVHVNKILVGNKCDMLDEKVVSTEEGAKLAKEFGIEFWECSAKNDINVEQAFIGIARDVKDRLVADGGGGPAANKGLSLNKPGQGSQRNRGCC 206          
BLAST of mRNA_P-littoralis_Contig200.7.1 vs. uniprot
Match: A0A4D9D279_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D279_9STRA)

HSP 1 Score: 307 bits (787), Expect = 3.230e-104
Identity = 157/206 (76.21%), Postives = 176/206 (85.44%), Query Frame = 0
Query:    1 MSRNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRISGNVNL-NAQASKKKAGCC 205
            M+R ++PFDMQIKLLMIGDSGVGKTCLLLRYANDSFS TFITTIGIDFKIKN++LD +RIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD++SF SIRNWV QIQQHADV VNKILIGNKCDM   R VS EEG  LA ++GIQFFETSAKNDINVEK F+TIAREVK+R++ DG   G R +G   + +A+ S +   CC
Sbjct:    1 MARQENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGRRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVSTEEGQSLANDFGIQFFETSAKNDINVEKSFVTIAREVKNRMLVDG---GPRATGGKAIVDAKRSNEAKKCC 203          
BLAST of mRNA_P-littoralis_Contig200.7.1 vs. uniprot
Match: A0A024TZG5_9STRA (Uncharacterized protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TZG5_9STRA)

HSP 1 Score: 307 bits (786), Expect = 6.060e-104
Identity = 159/211 (75.36%), Postives = 176/211 (83.41%), Query Frame = 0
Query:    1 MSRNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADG-PNQGSRISGNVNLNAQASKK-----KAGCC 205
            M+RN++PFDMQIKLLMIGDSGVGKTCLLLRYANDSFS TFITTIGIDFK+KNIDLD K+IKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SFNSIRNWV QIQQHADV VNKIL+GNKCDM +D+ VS EEG  LA EYG++FFETSAKN+INVE GFI IA EVK RLM +G P++ S +  N+        K     K GCC
Sbjct:    1 MARNENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKVKNIDLDGKKIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFNSIRNWVGQIQQHADVHVNKILVGNKCDMLDDKVVSTEEGQALADEYGVKFFETSAKNNINVEGGFIEIANEVKTRLMEEGGPHKKSDLVVNLGKKGNDPTKASNGGKGGCC 211          
BLAST of mRNA_P-littoralis_Contig200.7.1 vs. uniprot
Match: A0A6T5Q365_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5Q365_HETAK)

HSP 1 Score: 304 bits (778), Expect = 8.420e-103
Identity = 155/202 (76.73%), Postives = 174/202 (86.14%), Query Frame = 0
Query:    1 MSRNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRISGNVNLNAQASKKKA 202
            M+R+++ +DMQIKLLMIGDSGVGKTCLLLRYAN +FSQTFITTIGIDFKIKNI LD KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SFNSIRNWV+QIQQHADV VNKILIGNKCDM ++R V+ EEG +LAAEYGIQFFETSAKNDI VE+ F+T+AREVK+RL+ D      +    VNL  Q S  K+
Sbjct:    1 MARHENAYDMQIKLLMIGDSGVGKTCLLLRYANAAFSQTFITTIGIDFKIKNITLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRNSFNSIRNWVSQIQQHADVHVNKILIGNKCDMKDERVVTTEEGQKLAAEYGIQFFETSAKNDIQVEESFVTVAREVKERLINDVDR---KTDARVNLQTQKSSSKS 199          
BLAST of mRNA_P-littoralis_Contig200.7.1 vs. uniprot
Match: A0A7S2RB79_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RB79_9STRA)

HSP 1 Score: 303 bits (776), Expect = 1.530e-102
Identity = 157/198 (79.29%), Postives = 172/198 (86.87%), Query Frame = 0
Query:    8 FDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRISGNVNLNAQASKKKAGCC 205
            FDMQIKLLMIGDSGVGKTCLLLRYANDSFS TFITTIGIDFKIKNI+LD+KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SF SIRNWV+QIQQHADV VNKILIGNKCDM++ R VS +EG +LA EYGIQFFETSAKNDI V+ GF+ IAREVK+RL+ADGP   +  SG  N + Q +K K   C
Sbjct:    7 FDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNIELDNKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRTSFTSIRNWVSQIQQHADVHVNKILIGNKCDMEDQRMVSFDEGKKLAQEYGIQFFETSAKNDIEVDSGFVAIAREVKNRLIADGPT--AVRSGIHNPSHQNNKSKGRAC 202          
BLAST of mRNA_P-littoralis_Contig200.7.1 vs. uniprot
Match: A0A7S2V1J6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1J6_9STRA)

HSP 1 Score: 302 bits (774), Expect = 2.340e-102
Identity = 155/196 (79.08%), Postives = 167/196 (85.20%), Query Frame = 0
Query:   10 MQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRISGNVNLNAQASKKKAGCC 205
            MQIKLLMIGDSGVGKTCLLLRYAN SFSQTFITTIGIDFKIK IDLD KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+KSFNSIRNW++QIQQHADV VNKIL GNKCDM E+R V+ EEG +LA+EYGI FFE SAKND+NVE  F+TIAREVKDRL+ D     +R    VNL      KK+GCC
Sbjct:    1 MQIKLLMIGDSGVGKTCLLLRYANSSFSQTFITTIGIDFKIKTIDLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRKSFNSIRNWISQIQQHADVHVNKILCGNKCDMSEERAVTTEEGQKLASEYGIGFFEASAKNDVNVETSFVTIAREVKDRLLLDVGTM-ARGGERVNLGNAKPAKKSGCC 195          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig200.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0A4_ECTSI2.180e-13997.56Rab8A, RAB family GTPase n=2 Tax=Phaeophyceae TaxI... [more]
A0A836CCB2_9STRA8.930e-12185.92Rab8A, rab family GTPase n=2 Tax=Tribonema minus T... [more]
A0A6H5KYQ5_9PHAE4.710e-11198.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
K3WPX9_GLOUD6.910e-10878.05Uncharacterized protein n=28 Tax=Oomycota TaxID=47... [more]
A0A7S4M6F2_9STRA1.250e-10475.24Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A4D9D279_9STRA3.230e-10476.21Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A024TZG5_9STRA6.060e-10475.36Uncharacterized protein n=7 Tax=Saprolegniaceae Ta... [more]
A0A6T5Q365_HETAK8.420e-10376.73Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2RB79_9STRA1.530e-10279.29Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2V1J6_9STRA2.340e-10279.08Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 150..172
score: 43.27
coord: 53..75
score: 54.58
coord: 12..33
score: 50.82
coord: 35..51
score: 33.09
coord: 115..128
score: 43.7
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..176
e-value: 0.0032
score: 1.6
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 12..175
e-value: 2.4E-97
score: 339.4
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 13..175
e-value: 1.4E-37
score: 140.8
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 17..201
e-value: 2.8E-5
score: 25.9
NoneNo IPR availablePANTHERPTHR47980LD44762Pcoord: 1..205
NoneNo IPR availablePANTHERPTHR47980:SF18SUBFAMILY NOT NAMEDcoord: 1..205
NoneNo IPR availablePROSITEPS51420RHOcoord: 5..188
score: 10.293253
NoneNo IPR availablePROSITEPS51419RABcoord: 7..205
score: 35.625038
NoneNo IPR availableCDDcd01867Rab8_Rab10_Rab13_likecoord: 9..175
e-value: 2.97527E-113
score: 318.443
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 14..175
e-value: 6.7E-12
score: 32.7
IPR001806Small GTPasePFAMPF00071Rascoord: 13..173
e-value: 6.5E-65
score: 217.7
IPR001806Small GTPasePROSITEPS51421RAScoord: 4..205
score: 22.327095
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 5..205
e-value: 5.7E-72
score: 243.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 9..176
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 11..166
e-value: 2.4E-28
score: 96.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig200contigP-littoralis_Contig200:39534..44379 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig200.7.1mRNA_P-littoralis_Contig200.7.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig200 39454..44888 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig200.7.1 ID=prot_P-littoralis_Contig200.7.1|Name=mRNA_P-littoralis_Contig200.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=206bp
MSRNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKI
KNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFN
SIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQF
FETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRISGNVNLNAQASKK
KAGCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom