mRNA_P-littoralis_Contig200.7.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig200.7.1
Unique NamemRNA_P-littoralis_Contig200.7.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig200.7.1 vs. uniprot
Match: D7G0A4_ECTSI (Rab8A, RAB family GTPase n=2 Tax=Phaeophyceae TaxID=2870 RepID=D7G0A4_ECTSI)

HSP 1 Score: 399 bits (1024), Expect = 4.760e-137
Identity = 200/205 (97.56%), Postives = 202/205 (98.54%), Query Frame = 3 
Query:   81 MSRNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRISGNVNLNAQASKKKAGCC 695
            MSRN+SPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPN GSR +GNVNLNAQASKKK GCC
Sbjct:    1 MSRNESPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNPGSRAAGNVNLNAQASKKKTGCC 205
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BLAST of mRNA_P-littoralis_Contig200.7.1 vs. uniprot
Match: A0A836CCB2_9STRA (Rab8A, rab family GTPase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCB2_9STRA)

HSP 1 Score: 352 bits (902), Expect = 1.660e-118
Identity = 177/206 (85.92%), Postives = 192/206 (93.20%), Query Frame = 3 
Query:   81 MSRNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRISGNVNLNAQASK-KKAGCC 695
            M+R++SPFDMQIKLLMIGDSGVGKTCLLLRYA+D FSQTFITTIGIDFKIKNI+LD+KR+KLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSF SIRNWVAQIQQHADV VNKILIGNKCD+D +REVS EEGAQLAAEYGIQFFETSAKNDINVEKGFIT+AREVK+RLMADG +QG+R  GNV L+A A   KK+ CC
Sbjct:    1 MARHESPFDMQIKLLMIGDSGVGKTCLLLRYASDHFSQTFITTIGIDFKIKNIELDTKRVKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQSIRNWVAQIQQHADVHVNKILIGNKCDIDNEREVSTEEGAQLAAEYGIQFFETSAKNDINVEKGFITVAREVKNRLMADGGSQGARTQGNVALSAPAKGGKKSSCC 206
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BLAST of mRNA_P-littoralis_Contig200.7.1 vs. uniprot
Match: A0A6H5KYQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYQ5_9PHAE)

HSP 1 Score: 326 bits (835), Expect = 7.830e-109
Identity = 164/167 (98.20%), Postives = 165/167 (98.80%), Query Frame = 3 
Query:  195 TFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRISGNVNLNAQASKKKAGCC 695
            TFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSF+SIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPN GSR SGNVNLNAQASKKKAGCC
Sbjct:    8 TFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFSSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNPGSRASGNVNLNAQASKKKAGCC 174
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BLAST of mRNA_P-littoralis_Contig200.7.1 vs. uniprot
Match: K3WPX9_GLOUD (Uncharacterized protein n=28 Tax=Oomycota TaxID=4762 RepID=K3WPX9_GLOUD)

HSP 1 Score: 319 bits (817), Expect = 1.110e-105
Identity = 160/205 (78.05%), Postives = 179/205 (87.32%), Query Frame = 3 
Query:   81 MSRNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRISGNVNLNAQASKKKAGCC 695
            M+R+++PFDMQIKLLMIGDSGVGKTCLLLRYANDSFS TFITTIGIDFKIKNI+LD+K++KLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SF SIRNWV QIQQHADV VNKILIGNKCDM +D+ VS EEG  LA EYG++FFETSAKN+INVE GFI IAREVK+RLM +G   G     NVNL+A+ +  K GCC
Sbjct:    1 MARHENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNIELDNKKVKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFQSIRNWVGQIQQHADVHVNKILIGNKCDMTDDKVVSTEEGQALADEYGVKFFETSAKNNINVESGFIEIAREVKNRLMEEG---GPHKKENVNLSAKPAAPKKGCC 202
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BLAST of mRNA_P-littoralis_Contig200.7.1 vs. uniprot
Match: A0A7S4M6F2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4M6F2_9STRA)

HSP 1 Score: 311 bits (796), Expect = 1.940e-102
Identity = 155/206 (75.24%), Postives = 179/206 (86.89%), Query Frame = 3 
Query:   81 MSRNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRISG-NVNLNAQASKKKAGCC 695
            MS+  +P+DMQIKLLMIGDSGVGKTCLLLRYANDSFS TFITTIGIDFKIKN+D+D KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD++SF SIRNWV+QIQQHADV VNKIL+GNKCDM +++ VS EEGA+LA E+GI+F+E SAKNDINVE+ FI IAR+VKDRL+ADG    +   G ++N   Q S++  GCC
Sbjct:    1 MSQQSAPYDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNVDIDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVSQIQQHADVHVNKILVGNKCDMLDEKVVSTEEGAKLAKEFGIEFWECSAKNDINVEQAFIGIARDVKDRLVADGGGGPAANKGLSLNKPGQGSQRNRGCC 206
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BLAST of mRNA_P-littoralis_Contig200.7.1 vs. uniprot
Match: A0A4D9D279_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D279_9STRA)

HSP 1 Score: 310 bits (793), Expect = 4.970e-102
Identity = 157/206 (76.21%), Postives = 176/206 (85.44%), Query Frame = 3 
Query:   81 MSRNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRISGNVNL-NAQASKKKAGCC 695
            M+R ++PFDMQIKLLMIGDSGVGKTCLLLRYANDSFS TFITTIGIDFKIKN++LD +RIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD++SF SIRNWV QIQQHADV VNKILIGNKCDM   R VS EEG  LA ++GIQFFETSAKNDINVEK F+TIAREVK+R++ DG   G R +G   + +A+ S +   CC
Sbjct:    1 MARQENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGRRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVSTEEGQSLANDFGIQFFETSAKNDINVEKSFVTIAREVKNRMLVDG---GPRATGGKAIVDAKRSNEAKKCC 203
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BLAST of mRNA_P-littoralis_Contig200.7.1 vs. uniprot
Match: A0A024TZG5_9STRA (Uncharacterized protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TZG5_9STRA)

HSP 1 Score: 309 bits (792), Expect = 9.300e-102
Identity = 159/211 (75.36%), Postives = 176/211 (83.41%), Query Frame = 3 
Query:   81 MSRNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADG-PNQGSRISGNVNLNAQASKK-----KAGCC 695
            M+RN++PFDMQIKLLMIGDSGVGKTCLLLRYANDSFS TFITTIGIDFK+KNIDLD K+IKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SFNSIRNWV QIQQHADV VNKIL+GNKCDM +D+ VS EEG  LA EYG++FFETSAKN+INVE GFI IA EVK RLM +G P++ S +  N+        K     K GCC
Sbjct:    1 MARNENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKVKNIDLDGKKIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFNSIRNWVGQIQQHADVHVNKILVGNKCDMLDDKVVSTEEGQALADEYGVKFFETSAKNNINVEGGFIEIANEVKTRLMEEGGPHKKSDLVVNLGKKGNDPTKASNGGKGGCC 211
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BLAST of mRNA_P-littoralis_Contig200.7.1 vs. uniprot
Match: A0A6T5Q365_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5Q365_HETAK)

HSP 1 Score: 306 bits (783), Expect = 1.800e-100
Identity = 155/202 (76.73%), Postives = 174/202 (86.14%), Query Frame = 3 
Query:   81 MSRNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRISGNVNLNAQASKKKA 686
            M+R+++ +DMQIKLLMIGDSGVGKTCLLLRYAN +FSQTFITTIGIDFKIKNI LD KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SFNSIRNWV+QIQQHADV VNKILIGNKCDM ++R V+ EEG +LAAEYGIQFFETSAKNDI VE+ F+T+AREVK+RL+ D      +    VNL  Q S  K+
Sbjct:    1 MARHENAYDMQIKLLMIGDSGVGKTCLLLRYANAAFSQTFITTIGIDFKIKNITLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRNSFNSIRNWVSQIQQHADVHVNKILIGNKCDMKDERVVTTEEGQKLAAEYGIQFFETSAKNDIQVEESFVTVAREVKERLINDVDR---KTDARVNLQTQKSSSKS 199
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BLAST of mRNA_P-littoralis_Contig200.7.1 vs. uniprot
Match: A0A7S2RB79_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RB79_9STRA)

HSP 1 Score: 305 bits (782), Expect = 2.300e-100
Identity = 157/198 (79.29%), Postives = 172/198 (86.87%), Query Frame = 3 
Query:  102 FDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRISGNVNLNAQASKKKAGCC 695
            FDMQIKLLMIGDSGVGKTCLLLRYANDSFS TFITTIGIDFKIKNI+LD+KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SF SIRNWV+QIQQHADV VNKILIGNKCDM++ R VS +EG +LA EYGIQFFETSAKNDI V+ GF+ IAREVK+RL+ADGP   +  SG  N + Q +K K   C
Sbjct:    7 FDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNIELDNKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRTSFTSIRNWVSQIQQHADVHVNKILIGNKCDMEDQRMVSFDEGKKLAQEYGIQFFETSAKNDIEVDSGFVAIAREVKNRLIADGPT--AVRSGIHNPSHQNNKSKGRAC 202
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BLAST of mRNA_P-littoralis_Contig200.7.1 vs. uniprot
Match: A0A7S2V1J6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1J6_9STRA)

HSP 1 Score: 305 bits (780), Expect = 3.510e-100
Identity = 155/196 (79.08%), Postives = 167/196 (85.20%), Query Frame = 3 
Query:  108 MQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRISGNVNLNAQASKKKAGCC 695
            MQIKLLMIGDSGVGKTCLLLRYAN SFSQTFITTIGIDFKIK IDLD KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+KSFNSIRNW++QIQQHADV VNKIL GNKCDM E+R V+ EEG +LA+EYGI FFE SAKND+NVE  F+TIAREVKDRL+ D     +R    VNL      KK+GCC
Sbjct:    1 MQIKLLMIGDSGVGKTCLLLRYANSSFSQTFITTIGIDFKIKTIDLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRKSFNSIRNWISQIQQHADVHVNKILCGNKCDMSEERAVTTEEGQKLASEYGIGFFEASAKNDVNVETSFVTIAREVKDRLLLDVGTM-ARGGERVNLGNAKPAKKSGCC 195
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig200.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0A4_ECTSI4.760e-13797.56Rab8A, RAB family GTPase n=2 Tax=Phaeophyceae TaxI... [more]
A0A836CCB2_9STRA1.660e-11885.92Rab8A, rab family GTPase n=2 Tax=Tribonema minus T... [more]
A0A6H5KYQ5_9PHAE7.830e-10998.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
K3WPX9_GLOUD1.110e-10578.05Uncharacterized protein n=28 Tax=Oomycota TaxID=47... [more]
A0A7S4M6F2_9STRA1.940e-10275.24Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A4D9D279_9STRA4.970e-10276.21Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A024TZG5_9STRA9.300e-10275.36Uncharacterized protein n=7 Tax=Saprolegniaceae Ta... [more]
A0A6T5Q365_HETAK1.800e-10076.73Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2RB79_9STRA2.300e-10079.29Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2V1J6_9STRA3.510e-10079.08Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig200contigP-littoralis_Contig200:39454..44888 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G0A4
PFAMsRas
Model size1207
Max annot lvl2759|Eukaryota
KEGG koko:K07901
KEGG Pathwayko04144,ko04152,ko04530,ko04972,map04144,map04152,map04530,map04972
Hectar predicted targeting categoryother localisation
Exons5
Evalue3.58e-140
EggNOG OGsKOG0078@1|root,KOG0078@2759|Eukaryota
Ec32 ortholog descriptionRab8A, RAB family GTPase
Ec32 orthologEc-14_005110.1
DescriptionGTPase activity
Cds size618
COG categoryS
BRITEko00000,ko00001,ko03036,ko04031,ko04131,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig200.7.1prot_P-littoralis_Contig200.7.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig200 39534..44379 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789981.585006-UTR-P-littoralis_Contig200:39453..395331680789981.585006-UTR-P-littoralis_Contig200:39453..39533Pylaiella littoralis U1_48UTRP-littoralis_Contig200 39454..39533 +
1680789981.6580472-UTR-P-littoralis_Contig200:44379..448881680789981.6580472-UTR-P-littoralis_Contig200:44379..44888Pylaiella littoralis U1_48UTRP-littoralis_Contig200 44380..44888 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789981.6021621-CDS-P-littoralis_Contig200:39533..395941680789981.6021621-CDS-P-littoralis_Contig200:39533..39594Pylaiella littoralis U1_48CDSP-littoralis_Contig200 39534..39594 +
1680789981.6127129-CDS-P-littoralis_Contig200:41316..414191680789981.6127129-CDS-P-littoralis_Contig200:41316..41419Pylaiella littoralis U1_48CDSP-littoralis_Contig200 41317..41419 +
1680789981.621909-CDS-P-littoralis_Contig200:42389..425581680789981.621909-CDS-P-littoralis_Contig200:42389..42558Pylaiella littoralis U1_48CDSP-littoralis_Contig200 42390..42558 +
1680789981.6370022-CDS-P-littoralis_Contig200:43501..435671680789981.6370022-CDS-P-littoralis_Contig200:43501..43567Pylaiella littoralis U1_48CDSP-littoralis_Contig200 43502..43567 +
1680789981.647534-CDS-P-littoralis_Contig200:44160..443791680789981.647534-CDS-P-littoralis_Contig200:44160..44379Pylaiella littoralis U1_48CDSP-littoralis_Contig200 44161..44379 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig200.7.1

>prot_P-littoralis_Contig200.7.1 ID=prot_P-littoralis_Contig200.7.1|Name=mRNA_P-littoralis_Contig200.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=206bp
MSRNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKI
KNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFN
SIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQF
FETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRISGNVNLNAQASKK
KAGCC*
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mRNA from alignment at P-littoralis_Contig200:39454..44888+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig200.7.1 ID=mRNA_P-littoralis_Contig200.7.1|Name=mRNA_P-littoralis_Contig200.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5435bp|location=Sequence derived from alignment at P-littoralis_Contig200:39454..44888+ (Pylaiella littoralis U1_48)
GGAGGCCAGCTTTTTGAGTACGTGGTAAAGAAGGGGGGGGGGGCTACCTG
TCACACCCACACAGCTTGTTTGCTGCGGACATGTCGCGAAATGACAGCCC
ATTCGATATGCAAATCAAGCTGCTGATGATCGGCGACAGCGGTGAGTTTG
GTTGACGCGCTGCGAACTACCGGTATCACACCTGTTCATCTTTATTGAAG
AGTCTGAGTGCCAACCCCCCCCCCGCCCCTTCCCGCCGCCACCGCCGCCA
CCGCCGCCACCGCCGCCACCGCCGCTACCCTGTCCCCCGTCGACAGTGCT
GGTCCGGTTCCTGGTGCGATCAAGTCCTCTTGTTATCTTGTCTCCGTATT
TGTCCTACACAGCAAAGAGAGGCTGCGTAAATTGCTTGACCCGTTGGGGT
GGACAGTAGGTACAGCAGCACACAAAAGGGCCAAAGAGGCGACCTCGAAG
TTGTCCTGTAGCTGGCCTGATATCACCCGTGTACACAGGAGGACACCTTC
ATACCGCTGTTCCTCTGTACTGCTTCTGCTTGCCATCTTGCAGGAGGAAA
CAAACCAAAGTACTCGTGATCTCACGAATAAGTACTTCGCGCACTTCTTT
CACTTCGACGTGTTGAGCTGACCCTGATAACCCGATAACCCCAGGGGTAC
CTGCAACACGCCATCTGCTGGAGTCTCAAAAGCATTTTGTATGTAATCTT
TGTGTTCGTTGCTAGTCTACGATCTGAATACACCTGCGTATGCACGTCTT
TGTAGAAAATAAGCACACTAGCATTCAGAGAAGACCAGCAAGCATGAGGG
GTTTTGACTGCATTATACTTTGTGTTCGCTGTTAATTTAGCCCGCAGGAT
TCTCGTTAAAGCGAAGAGGCTTCGACTGCATCGACTCAAGCAAGTTAGAA
GTATGAAAGAAAACAAGAACAAGACAAATGCTGCTACTTTTCTGCACTGA
CGGTAATGCTACGGAAGATAACACCCCCCCCCCCACACCCCGAGTGTCGA
GCAGTCATCCCATGAGATGCTCGATATGCATACCAAAAAATATTGCCGAA
GCGAGTGGCGTGGTGACGGTAGACCTGTTCGTAATGTGTGGTATGATATG
TTCTACGGCACCGTCGTGAATCACTAGTTTGCGGAGTTAATCTATCGAGC
TTTAGTTTCGGCATTTGGTCCAAGGGGCTCTGCGTGTCATCTTCCGTCGA
ATCCGGTACAGCGTCGGAGTTTGTGCGTGTGCGTGTGCGTGTGCGTGTGT
GTGAGGTACACATGTCTCATGATTAATATGACGACAGCAGCTTGATCGTT
TCAGCTGGAATAACGGTGCGGCAGTATCGCTTTCCTCGCTGACCAGTGTT
GGGATAAGTGCAGGGTGATTTCTCCCTTGTCTCCCATAGTTACATAGTCA
CAGCAGGGCTCTCAATAGCGGACGACGGCGGTAAAATTTCGCAGGTGACT
CTGTACAAATGCAGGCAGTGTCCTTGCCGTGTGCAAAAGCCATATGTCGC
ACAGCGGCGCACGGCAGTTCCCACCGGGTTGCGTACATTGGGTTTGTGCG
TCATTATTGCTTGTTCTTTTGTAGAGAGCACTGTCGGTTTGGTTGACCAA
GAGATCAGAGAGCCGACATCCTGATGTGGCCATAAATATTCGCGGTGTCG
GCACAATCTACAATACACTCTGCTGGGCGCATCGCTGACTTTCGCTGTCG
AAAATGGGCGAGAAAAGCATCATCATCGACCGTATTTTTTAACCCCAGAG
GACTGCCATGTCATGGTTAGGTACGTTCAACACCAGCCTTCGCCCCCCTC
CGCCTCGGCCCTCGCCCCGGCCTCCCCATTTTCTGCACCCGCGTGCGCGT
GGTTCCCTTGCAGGCGTGGGTAAGACGTGCCTGTTGCTTCGCTATGCAAA
CGATTCCTTCTCGCAAACATTCATCACCACAATTGGGATCGACTTCAAGA
TCAAAAACATCGACCTGTGAGTGCAAGCGAGTCCCCTTCCCCTTCCCCTT
TCTTGTTGGTGCCCGCCATGCTTGCTTGAACCGTCACACTCGTTTCGACG
CGGAGTGTTGTATTTTAGTCTCTGCTGCTCTTTTTTTTGTCGCCCATGTC
GTTTTACTGCCGCAGCGCTTTACCTACGGTCGTGACGCCATAGTTTGTGT
TATTGGTGTTAATTTCCGGTGTCTAAAATGTTATTTGGATGGGGAACAAT
AGGCTTGGCCAGTGAGCAATGAACCACTCAGCAGCAAGATCTCTGAGGCG
TCGCCGCATCACATTTCGTAGTTTTGTACTTGGCCTTGGCCTTGAACAAA
TCGAAGTCTTTGTCGGAGGGTGTCGGCACCGTAGGTAAGCGAGCGAAGAC
GATGTATTCGTAGCACCTTCATCGTGTGCACCCTCCCCCCCTCCCCCATT
GTTTGTAGTTGCACCATTCACGAGGGCGCGGGGGGGGGGGGGGGGATATC
CGAGAGTATTGTTTTTGCTTGAAAACGGTTGTTTGCCACCTCCTGGGTGT
AGTATACCAGGTGGCTGGGAAAAAAAGTGAAAACAAAAAAAATGGAGATA
TATTATACCTACTGTACACGCGTGTAAATATTTCAGGCTTGAGCCTCAAA
AGTTGTCGCTAATGAAGTGCATTCGACGCGTATTCCAACCCTCCGCCGGG
AGGTTCAAAACCACGAAAGTCGAGTACCAAGCTAGAACTGATCAGCCGGC
GACGTTGGTGTACGGGTCTCATGCAGGCAGCCACCCGAGTTTCGTGCGTT
TTGCTTTGCTCTCACACGACACCCGTTTGAGACAAGAGCTACGCTATTTC
CCATGCCGGCAACTTTTTCTTCCCTGAATAGTACTGCTATACCGCCGGTG
CCCCCTATCGTCGTGTCTAATTGTGCCCCCCCTGTCCCTCGCCACCACCG
CGGCGCTCTCTCTCTCTTTCTCTGAAACAAACCCAGCGATTCCAAGCGAA
TCAAGCTGCAGATCTGGGACACGGCTGGTCAAGAGCGCTTCCGCACCATC
ACTACCTCTTATTTCAGAGGCGCACAGGGCATTCTTCTGGTTTACGATGT
CACAGACAAGAAGTCCTTCAATTCCATCCGGAACTGGGTCGCGCAAATCC
AGCAGGTACCGCATCAACGACGAGTCTGGGAGGTTGTGGGCGGCGTGTGT
TTCCCTCAGGGCCCACACGCGTAATGAAGCGAGATGCTGCTTGAGAGTAA
ACTTTTGTGATGTGCATCCTTTTTGCGCTACGGTCGTGTCGGTGCCTTCT
CTGTCTGCCGTACCGGGTGGCAATGCGGGTAATTGGACACGCAAATGCAT
TCCAGCCGTGCGTAAAGCCTGTGGGTGGGGGGTTTTGTCGCTACGCTCTT
TCGTTACAAGCCTCGGCAGCCGTGGGGAACGACCTATATCGCTGTCGACT
CGTGGCGGACCAAATACACTAGGATGCAGCTCGTGCGGGCATATTCTCAC
CACAGCCTTCGATGCGCATGCAGTCCATCAAGCACAGAGCGTCGCGAGGG
GGTGAAACCCAGGGGGGCGGGGCGGGGCGGGGGGGTTGTCAATTGCCAGC
CAGGCCCGACAGGGATTGTGACGAGAGATTCCACGGGCGGGCGAGAAGGC
CAGCTCTACGACTCGCGCGGAGTTCAGCGTCATTTTTGGTGCAATTTCCC
TTCGTTTTCCTCCATACGTGGCCCTCTGTATACTCTGCCGCGCAAGGATT
GAGGCATCAAGTGGAGCGCAAGTCGACGCCTCTCAGGGGGGGGGGCGGGG
GGCACAAGGCGACCACTACCGGACGAGCATGGGCTCGGTCATCGCTTGAT
CCACTAACTGCGTGTAACTCGCCGAAACAGGCAGAACGTGGAACGGCGTT
GCAGAGATTCATTCCGCTGGTTGGTGTGCTCGTTTCATAAGCGCCTATCG
AGATCCTGCCGGAGAGCTATCTTCGACAATAATCTCGCGATGAAATGTCC
GCGCCTCCCTCCCCGCCCAGCCGTTTTCTGTCCCAATACCTCATCACTTG
CCGCGATGCGCGCATCTTGCTCTTTCGTTCTCTTTCTCTCTCTCGCAGCA
CGCTGACGTGGCCGTAAACAAGATTTTGATCGGCAACAAGTGCGACATGG
ACGAGGACCGGGAGGTGAGGCCCAACGTACTGCAAATGTATTTTGTTAGT
TCTTCAAAAGAGTGCCGGCTCTGACCAGCTCGGCTCGGCTGGCTCGAGAA
GCCGATCGACCCGCCTTGTCACGTTTCGTCATTTGCCTCCTTTGTGTTCA
CAAGCGTCTTATTTATTTGTTGTTGCTCTCCCGTGGCCGTTCGTTCGTGT
GCTGTACCGTGCCGTTGTTCCTGCTTTACCTGATACTCGTACAAAACGCT
GCAGAGATGTTTATCCGGGTGCGCTCGGCCTGTGTGTTGATGAATGGTAC
ATCTACGGCCACGGGCATTGTTTGTGCTGACGTATTTTTATAGTCTGCCG
GCCGCGTTCCAATTATATCAAAGGCCTCGCCTGCTGCTGCTGCTGTTGCT
GTTGCGAGCGCAGCACACCTCGAAACTGCATCAAGTCGATGCGTACATGT
TTTATGTACAAGTTGGGCCTGACGGGGCCAGTGCTCTCTCTCTCTCCCTC
TCTCTGCGTGGTCAATGTGGTGGTTACTCCCATTATTTCTACTGTTGGGA
TATTCTTCAACTAAAACGTGACACAGTGTTCTTCCTGCATACCTGCTTGA
ATCACAGGTCAGCAGGGAAGAAGGGGCGCAGCTGGCAGCCGAGTACGGCA
TCCAGTTCTTCGAGACTAGCGCCAAGAACGACATCAACGTCGAGAAAGGT
TTTATCACCATCGCAAGGGAGGTCAAGGACAGGCTCATGGCGGACGGCCC
CAACCAGGGGTCCCGCATCTCGGGCAACGTCAATCTTAACGCACAAGCCT
CCAAGAAAAAGGCCGGCTGCTGCTGAGAGAGGATCGCTGAAGTAGCGGTA
GTGATGTGGTGGTGGTGGCGGTGGATAATTTTTTTTTGTAGCAGCGCAAT
GGAGGGGTGGGGACGGAAAGAGAAGGGAGAGCGGCGGCAGGGGAAACTTT
GCTGCTGTCCATCGCGCGGCACAGAGGCGGGGAGTTCAAGCTTTCAGTGT
CACGCTTCATGGGTGGATACGGCTATGCAGGGGAAGGGGGGCGGGGGCGG
GTTGGGGTGGAGTCGGCGCGATTGTCAACAGCTCTCCTGCGTGGCACGCG
GGGCGAAAAGTATAAACTTGCCGTGTTTTGATTTTATTTGTTTTCCCACG
CATGGCGCGCACCAGCTGCTGGCAGGAGGCGGACGGGCGAAAGAGGAGGT
TGGCTGACTCGAGGCACACTTACGGCGGAACTACAGCAGTAACATGTGTT
TGCTGTTCACTGCTTGGATCCAGGAAGCTGGTCAGCAAGAATGGAGGGAT
TGGAATAGGGGCAGGAAAGAGTACAAACTTCGGAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig200:39454..44888+

>mRNA_P-littoralis_Contig200.7.1 ID=mRNA_P-littoralis_Contig200.7.1|Name=mRNA_P-littoralis_Contig200.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=618bp|location=Sequence derived from alignment at P-littoralis_Contig200:39454..44888+ (Pylaiella littoralis U1_48)
ATGTCGCGAAATGACAGCCCATTCGATATGCAAATCAAGCTGCTGATGAT
CGGCGACAGCGGCGTGGGTAAGACGTGCCTGTTGCTTCGCTATGCAAACG
ATTCCTTCTCGCAAACATTCATCACCACAATTGGGATCGACTTCAAGATC
AAAAACATCGACCTCGATTCCAAGCGAATCAAGCTGCAGATCTGGGACAC
GGCTGGTCAAGAGCGCTTCCGCACCATCACTACCTCTTATTTCAGAGGCG
CACAGGGCATTCTTCTGGTTTACGATGTCACAGACAAGAAGTCCTTCAAT
TCCATCCGGAACTGGGTCGCGCAAATCCAGCAGCACGCTGACGTGGCCGT
AAACAAGATTTTGATCGGCAACAAGTGCGACATGGACGAGGACCGGGAGG
TCAGCAGGGAAGAAGGGGCGCAGCTGGCAGCCGAGTACGGCATCCAGTTC
TTCGAGACTAGCGCCAAGAACGACATCAACGTCGAGAAAGGTTTTATCAC
CATCGCAAGGGAGGTCAAGGACAGGCTCATGGCGGACGGCCCCAACCAGG
GGTCCCGCATCTCGGGCAACGTCAATCTTAACGCACAAGCCTCCAAGAAA
AAGGCCGGCTGCTGCTGA
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