prot_P-littoralis_Contig20.188.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig20.188.1
Unique Nameprot_P-littoralis_Contig20.188.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length521
Homology
BLAST of mRNA_P-littoralis_Contig20.188.1 vs. uniprot
Match: D8LJL9_ECTSI (PAS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJL9_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 3.250e-40
Identity = 94/196 (47.96%), Postives = 123/196 (62.76%), Query Frame = 0
Query:  247 KQSKSEGTPSPCD-------LDGGFYVDEREKLTRERNKNHSKKSRERKKALVNNLKKKVDELSPYRMLVEEAHDLISAHSADENVIFTYASGGFDRLLGVNPAGLKGMSFLDLVDPDDAPGVLHCILSTLHRGGISQVQYHMRPPPGAYAAEVETSFRLLSGRLLAVTRVRGRS-PHPVAPAPSSSPLHLADRGG 434
            K S S G+P+P          DG  ++D++ + +RE+N++HS++SR+RKKA +  LK+   +L PYRMLVE+AHD+IS HSAD +  F  ASG F R LG  P  + G S LDLV+  D   V+  I+ TL RGGI QVQY MRPP    A EVETSFR+ S RLLA+TR+ G   P  V+PA     +  A  GG
Sbjct:  328 KVSPSNGSPAPASPAVAAAGKDGDRFLDDKTRRSREKNRDHSRRSRQRKKAQLEGLKQASIDLGPYRMLVEQAHDMISVHSADADAFFALASGAFYRQLGFEPTKMLGASLLDLVETKDVQAVVQAIMDTLSRGGIKQVQYRMRPPSDGDAVEVETSFRMASRRLLAITRIVGAGVPRSVSPAKVPLLVPAAPSGG 523          
BLAST of mRNA_P-littoralis_Contig20.188.1 vs. uniprot
Match: A0A6H5KYK0_9PHAE (PAS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYK0_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 5.690e-38
Identity = 93/195 (47.69%), Postives = 120/195 (61.54%), Query Frame = 0
Query:  247 KQSKSEGTPSPCD---------LDGGFYVDEREKLTRERNKNHSKKSRERKKALVNNLKKKVDELSPYRMLVEEAHDLISAHSADENVIFTYASGGFDRLLGVNPAGLKGMSFLDLVDPDDAPGVLHCILSTLHRGGISQ----------VQYHMRPPPGAYAAEVETSFRLLSGRLLAVTRVRGRS-PHPVAPA 421
            K S S+G+P+P            DG  ++D++ +  RE+N++HS++SRERKKA +  LK+   +L PYRMLVE+AHD+IS HSAD +  F  ASG F R LG  P  + G S LDLV+P D   V+  I+ TL RGGI Q          VQY MRPP    A EVETSFR+ S RLLA+TR+ G     PV+PA
Sbjct:  364 KVSLSKGSPAPASPAVAAGKDGKDGDRFLDDKARRNREKNRDHSRRSRERKKAQLEGLKQASIDLGPYRMLVEQAHDMISVHSADADAFFALASGAFYRQLGFEPTKMLGTSLLDLVEPKDVQAVVQAIMDTLSRGGIKQASFMHSVPKLVQYRMRPPSDGDAVEVETSFRMASRRLLAITRIVGAGVSRPVSPA 558          
BLAST of mRNA_P-littoralis_Contig20.188.1 vs. uniprot
Match: A0A6H5KZ44_9PHAE (PAS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ44_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 1.010e-24
Identity = 69/158 (43.67%), Postives = 98/158 (62.03%), Query Frame = 0
Query:  257 PCDLDGGFYV-DEREKLTRERNKNHSKKSRERKKALVNNLKKKVDELSPYRMLVEEAHDLISAHSADENVIFTYASGGFDRLLGVNPAGLKGMSFLDLVDPDDAPGVLHCILSTLHRGGISQVQ-YHMRPPPGAYAAEVETSFRLLSGRLLAVTRVRG 412
            P ++D      +ER +  R RN++HS++SR+RKKALV  +K +V EL  YRMLVE+AHDLISAH+ D+  +F YAS  F R LG+    L G+  + LV PDDA  V   +   L    ++QV  Y +R     +   VE+SFR++  +L+A+TRV G
Sbjct:  167 PPEVDNKLLTPEERLERNRIRNRDHSRRSRQRKKALVEGMKNQVTELGAYRMLVEQAHDLISAHTTDDRTVFLYASNAFQRALGIRTEDLLGVQLIHLVHPDDAGRVTEALRRALLCNQVTQVVVYRLRHQQQEFT--VESSFRVVPTKLVAITRVGG 322          
BLAST of mRNA_P-littoralis_Contig20.188.1 vs. uniprot
Match: D7G032_ECTSI (Multi-sensor hybrid histidine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G032_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 3.510e-19
Identity = 52/119 (43.70%), Postives = 74/119 (62.18%), Query Frame = 0
Query:  295 LKKKVDELSPYRMLVEEAHDLISAHSADENVIFTYASGGFDRLLGVNPAGLKGMSFLDLVDPDDAPGVLHCILSTLHRGGISQVQ-YHMRPPPGAYAAEVETSFRLLSGRLLAVTRVRG 412
            +K +V EL  YRMLVE+AHDLISAH+ D+  +F YAS  F R+LG++   L G+  + LV PDDA  V   +   L    ++QV  Y +R     +   VE+SFR++  +L+A+TRV G
Sbjct:    1 MKNQVTELGAYRMLVEQAHDLISAHTTDDRTVFLYASNAFQRVLGISTEDLLGVQLIHLVHPDDAGRVTEALPPALLCNQVTQVVVYRLRHQQQEFT--VESSFRVVPTKLVAITRVGG 117          
BLAST of mRNA_P-littoralis_Contig20.188.1 vs. uniprot
Match: A0A662WZ67_9STRA (PAS domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WZ67_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 6.570e-12
Identity = 53/144 (36.81%), Postives = 80/144 (55.56%), Query Frame = 0
Query:  269 REKLTRERNKNHSKKSRERKKALVNNLKKKVDELSPYRMLVEEAHDLISAHSADENVIFTYASGGFDRLLGVNPAGLKG--MSFLDLVDPDDAPGVLHCILSTLHRGGISQVQYHMRPPPGAYAAEVETSFRLLSGRLLAVTRV 410
            +E+ +RERN++HS+KSR RKK  V +LK +V +L  Y+ + E+  D I+  +A+ + IF Y+S  + R+LG  P  +     SFLDLV PD+A  V          G   + Q+ ++   G Y    ETS RL    ++  TRV
Sbjct:  238 KEEKSRERNRDHSRKSRLRKKEFVESLKHEVGQLQVYQQICEQCLDCIALVAAESSAIFLYSSAAYTRVLGYQPHQIVPGQTSFLDLVHPDNAQEVRAVFTKFSTLGETRRFQFRIKSMEGEYF-RAETSARLAEKGVVCSTRV 380          
BLAST of mRNA_P-littoralis_Contig20.188.1 vs. uniprot
Match: A0A8K1CMV1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMV1_PYTOL)

HSP 1 Score: 75.5 bits (184), Expect = 6.040e-11
Identity = 53/144 (36.81%), Postives = 81/144 (56.25%), Query Frame = 0
Query:  269 REKLTRERNKNHSKKSRERKKALVNNLKKKVDELSPYRMLVEEAHDLISAHSADENVIFTYASGGFDRLLGV-NPAGLKGM-SFLDLVDPDDAPGVLHCILSTLHRGGISQVQYHMRPPPGAYAAEVETSFRLLSGRLLAVTRV 410
            +E+ +RERN++HS+KSR RKK  V +LK++V++L  Y+ + E   DLI+  +++   I  Y SG   R+LG  N   + G  SFLDLV PD  P V +      + G   + Q+ ++   G Y    ETS R+    ++  TRV
Sbjct:  272 KEEKSRERNRDHSRKSRLRKKEYVESLKQEVEQLRIYQQICEHNPDLIALVTSEPKAILLYTSGSHGRVLGFQNHHLVPGQTSFLDLVHPDHVPEVRNVFQKLCNVGDSKRFQFRIKSVDGEYY-NAETSARVADKGVVCSTRV 414          
BLAST of mRNA_P-littoralis_Contig20.188.1 vs. uniprot
Match: A0A3F2RI15_9STRA (PAS domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RI15_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 2.950e-9
Identity = 48/144 (33.33%), Postives = 80/144 (55.56%), Query Frame = 0
Query:  269 REKLTRERNKNHSKKSRERKKALVNNLKKKVDELSPYRMLVEEAHDLISAHSADENVIFTYASGGFDRLLGV-NPAGLKGM-SFLDLVDPDDAPGVLHCILSTLHRGGISQVQYHMRPPPGAYAAEVETSFRLLSGRLLAVTRV 410
            +E+ +RERN++HS+KSR RKK  V +LK +V +L  Y+ + E+  D I+  +A+ + +F Y+S  + R+LG  N   + G  SFLD+V PD+   V          G   + ++ ++   G +    ET+ RL    ++  TRV
Sbjct:  247 KEEKSRERNRDHSRKSRLRKKEFVESLKHEVGQLQVYQQICEQCMDCIALVAAEASAVFLYSSAAYTRVLGYQNHQIVPGQTSFLDMVHPDNVQDVRSVFTKLTTLGETYRFKFRIKSMDGEFF-NAETTARLAEKGVVCSTRV 389          
BLAST of mRNA_P-littoralis_Contig20.188.1 vs. uniprot
Match: A0A2P4XPB1_9STRA (PAS domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XPB1_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 3.060e-9
Identity = 48/144 (33.33%), Postives = 80/144 (55.56%), Query Frame = 0
Query:  269 REKLTRERNKNHSKKSRERKKALVNNLKKKVDELSPYRMLVEEAHDLISAHSADENVIFTYASGGFDRLLGV-NPAGLKGM-SFLDLVDPDDAPGVLHCILSTLHRGGISQVQYHMRPPPGAYAAEVETSFRLLSGRLLAVTRV 410
            +E+ +RERN++HS+KSR RKK  V +LK +V +L  Y+ + E+  D I+  +A+ + +F ++S  + R+LG  N   + G  SFLD+V PD+   V          G   + ++ ++   G Y    ET+ RL    ++  TRV
Sbjct:  139 KEEKSRERNRDHSRKSRLRKKEFVESLKHEVGQLQVYQQICEQCMDCIALVAAEASAVFLFSSAAYTRVLGYQNHQIVPGQTSFLDMVHPDNVQEVRAVFTKLNTLGETHRFKFRIKSTDGEYFP-AETTARLAEKGVVCSTRV 281          
BLAST of mRNA_P-littoralis_Contig20.188.1 vs. uniprot
Match: A0A3M6VUN5_9STRA (PAS domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VUN5_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 9.310e-9
Identity = 48/144 (33.33%), Postives = 80/144 (55.56%), Query Frame = 0
Query:  269 REKLTRERNKNHSKKSRERKKALVNNLKKKVDELSPYRMLVEEAHDLISAHSADENVIFTYASGGFDRLLGV-NPAGLKGM-SFLDLVDPDDAPGVLHCILSTLHRGGISQVQYHMRPPPGAYAAEVETSFRLLSGRLLAVTRV 410
            +E+ +RERN++HS+KSR RKK  V +LK +V +L  Y+ + E+  D I+  +A+ + IF ++S  + R+LG  N   + G  SFLD+V PD+   V          G   + ++ ++   G Y    ET+ R+    ++  TRV
Sbjct:  248 KEEKSRERNRDHSRKSRLRKKEFVESLKHEVGQLQVYQQICEQCMDCIALVAAEASAIFLFSSAAYTRVLGYQNHQIVPGQTSFLDMVHPDNVQEVRAVFTKLNTLGETHRFKFRIKSMDGEYF-NAETTARMAEKGVVCSTRV 390          
BLAST of mRNA_P-littoralis_Contig20.188.1 vs. uniprot
Match: A0A2D4C1Z3_PYTIN (PAS domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1Z3_PYTIN)

HSP 1 Score: 68.2 bits (165), Expect = 1.320e-8
Identity = 48/144 (33.33%), Postives = 76/144 (52.78%), Query Frame = 0
Query:  269 REKLTRERNKNHSKKSRERKKALVNNLKKKVDELSPYRMLVEEAHDLISAHSADENVIFTYASGGFDRLLGVNPAGL--KGMSFLDLVDPDDAPGVLHCILSTLHRGGISQVQYHMRPPPGAYAAEVETSFRLLSGRLLAVTRV 410
            +E+ +RERN++HS+KSR RKK  V +LK +V +L  Y+ + E   DLI   +A+   +F + S  + R+LG   + L     SFLDLV P     V        + G   + ++ +R   G +  + ETS R+    ++  TRV
Sbjct:  262 KEEKSRERNRDHSRKSRLRKKEYVESLKMEVQQLQIYQQVCEYNQDLIXLVTAEPKAVFLFTSSSYARVLGYQGSQLIPGQASFLDLVHPSQVAEVRSIFQKFSNIGDFKRFRFRIRSADGEFF-DAETSARVAEKGVVCSTRV 404          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig20.188.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJL9_ECTSI3.250e-4047.96PAS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KYK0_9PHAE5.690e-3847.69PAS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KZ44_9PHAE1.010e-2443.67PAS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G032_ECTSI3.510e-1943.70Multi-sensor hybrid histidine kinase n=1 Tax=Ectoc... [more]
A0A662WZ67_9STRA6.570e-1236.81PAS domain-containing protein n=2 Tax=Nothophytoph... [more]
A0A8K1CMV1_PYTOL6.040e-1136.81Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3F2RI15_9STRA2.950e-933.33PAS domain-containing protein n=3 Tax=Phytophthora... [more]
A0A2P4XPB1_9STRA3.060e-933.33PAS domain-containing protein n=1 Tax=Phytophthora... [more]
A0A3M6VUN5_9STRA9.310e-933.33PAS domain-containing protein n=1 Tax=Peronospora ... [more]
A0A2D4C1Z3_PYTIN1.320e-833.33PAS domain-containing protein n=1 Tax=Pythium insi... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 120..140
NoneNo IPR availableGENE3D3.30.450.20PAS domaincoord: 302..410
e-value: 9.7E-10
score: 40.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 263..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..289
NoneNo IPR availableCDDcd14809bZIP_AUREO-likecoord: 270..321
e-value: 7.12916E-12
score: 58.4109
IPR000014PAS domainSMARTSM00091pas_2coord: 303..371
e-value: 7.7E-4
score: 28.8
IPR000014PAS domainPROSITEPS50112PAScoord: 301..373
score: 9.395219
IPR000014PAS domainCDDcd00130PAScoord: 312..412
e-value: 1.57191E-5
score: 41.8499
IPR035965PAS domain superfamilySUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 308..390

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig20contigP-littoralis_Contig20:813119..817813 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig20.188.1mRNA_P-littoralis_Contig20.188.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig20 813007..819585 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig20.188.1 ID=prot_P-littoralis_Contig20.188.1|Name=mRNA_P-littoralis_Contig20.188.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=521bp
MGGSGVASACCIDDSFQSLVEEASCGSSSSSSSGSCSCSCSGSGSGSGSR
GAGLKHFSISAAAVAPVAATSAAVSGFAGLVCPPRSALGPAALRAQPPKQ
NVSSVQKTAAAAVVSPCFEQRQWQQQRQQQRQQQQQQKKKKTPSVGDKPV
AKKRGGGSGSLKKPQQQQRQKQDPSSRVKNAREAPAAPEGGERARKTRRK
ASGASSEPKGGGGNKTAGRSSSSSSSGGGGGEGGAAMKKSKNSKPRKQSK
SEGTPSPCDLDGGFYVDEREKLTRERNKNHSKKSRERKKALVNNLKKKVD
ELSPYRMLVEEAHDLISAHSADENVIFTYASGGFDRLLGVNPAGLKGMSF
LDLVDPDDAPGVLHCILSTLHRGGISQVQYHMRPPPGAYAAEVETSFRLL
SGRLLAVTRVRGRSPHPVAPAPSSSPLHLADRGGAGRCRVKTEAEPVATT
TATAGAAAAAAGAAAAGGRTRPMSPLPLQPVLSPLVTLSDMEADGGVGTG
FGSDDGGWSAGELAEIAGLM*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000014PAS
IPR035965PAS-like_dom_sf