mRNA_P-littoralis_Contig20.188.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig20.188.1
Unique NamemRNA_P-littoralis_Contig20.188.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig20.188.1 vs. uniprot
Match: D8LJL9_ECTSI (PAS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJL9_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 1.800e-38
Identity = 94/196 (47.96%), Postives = 123/196 (62.76%), Query Frame = 2 
Query:  851 KQSKSEGTPSPCD-------LDGGFYVDEREKLTRERNKNHSKKSRERKKALVNNLKKKVDELSPYRMLVEEAHDLISAHSADENVIFTYASGGFDRLLGVNPAGLKGMSFLDLVDPDDAPGVLHCILSTLHRGGISQVQYHMRPPPGAYAAEVETSFRLLSGRLLAVTRVRGRS-PHPVAPAPSSSPLHLADRGG 1414
            K S S G+P+P          DG  ++D++ + +RE+N++HS++SR+RKKA +  LK+   +L PYRMLVE+AHD+IS HSAD +  F  ASG F R LG  P  + G S LDLV+  D   V+  I+ TL RGGI QVQY MRPP    A EVETSFR+ S RLLA+TR+ G   P  V+PA     +  A  GG
Sbjct:  328 KVSPSNGSPAPASPAVAAAGKDGDRFLDDKTRRSREKNRDHSRRSRQRKKAQLEGLKQASIDLGPYRMLVEQAHDMISVHSADADAFFALASGAFYRQLGFEPTKMLGASLLDLVETKDVQAVVQAIMDTLSRGGIKQVQYRMRPPSDGDAVEVETSFRMASRRLLAITRIVGAGVPRSVSPAKVPLLVPAAPSGG 523
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BLAST of mRNA_P-littoralis_Contig20.188.1 vs. uniprot
Match: A0A6H5KYK0_9PHAE (PAS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYK0_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 2.360e-36
Identity = 93/195 (47.69%), Postives = 120/195 (61.54%), Query Frame = 2 
Query:  851 KQSKSEGTPSPCD---------LDGGFYVDEREKLTRERNKNHSKKSRERKKALVNNLKKKVDELSPYRMLVEEAHDLISAHSADENVIFTYASGGFDRLLGVNPAGLKGMSFLDLVDPDDAPGVLHCILSTLHRGGISQ----------VQYHMRPPPGAYAAEVETSFRLLSGRLLAVTRVRGRS-PHPVAPA 1375
            K S S+G+P+P            DG  ++D++ +  RE+N++HS++SRERKKA +  LK+   +L PYRMLVE+AHD+IS HSAD +  F  ASG F R LG  P  + G S LDLV+P D   V+  I+ TL RGGI Q          VQY MRPP    A EVETSFR+ S RLLA+TR+ G     PV+PA
Sbjct:  364 KVSLSKGSPAPASPAVAAGKDGKDGDRFLDDKARRNREKNRDHSRRSRERKKAQLEGLKQASIDLGPYRMLVEQAHDMISVHSADADAFFALASGAFYRQLGFEPTKMLGTSLLDLVEPKDVQAVVQAIMDTLSRGGIKQASFMHSVPKLVQYRMRPPSDGDAVEVETSFRMASRRLLAITRIVGAGVSRPVSPA 558
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BLAST of mRNA_P-littoralis_Contig20.188.1 vs. uniprot
Match: A0A6H5KZ44_9PHAE (PAS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ44_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 5.000e-24
Identity = 69/158 (43.67%), Postives = 98/158 (62.03%), Query Frame = 2 
Query:  881 PCDLDGGFYV-DEREKLTRERNKNHSKKSRERKKALVNNLKKKVDELSPYRMLVEEAHDLISAHSADENVIFTYASGGFDRLLGVNPAGLKGMSFLDLVDPDDAPGVLHCILSTLHRGGISQVQ-YHMRPPPGAYAAEVETSFRLLSGRLLAVTRVRG 1348
            P ++D      +ER +  R RN++HS++SR+RKKALV  +K +V EL  YRMLVE+AHDLISAH+ D+  +F YAS  F R LG+    L G+  + LV PDDA  V   +   L    ++QV  Y +R     +   VE+SFR++  +L+A+TRV G
Sbjct:  167 PPEVDNKLLTPEERLERNRIRNRDHSRRSRQRKKALVEGMKNQVTELGAYRMLVEQAHDLISAHTTDDRTVFLYASNAFQRALGIRTEDLLGVQLIHLVHPDDAGRVTEALRRALLCNQVTQVVVYRLRHQQQEFT--VESSFRVVPTKLVAITRVGG 322
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BLAST of mRNA_P-littoralis_Contig20.188.1 vs. uniprot
Match: D7G032_ECTSI (Multi-sensor hybrid histidine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G032_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 9.110e-19
Identity = 52/119 (43.70%), Postives = 74/119 (62.18%), Query Frame = 2 
Query:  995 LKKKVDELSPYRMLVEEAHDLISAHSADENVIFTYASGGFDRLLGVNPAGLKGMSFLDLVDPDDAPGVLHCILSTLHRGGISQVQ-YHMRPPPGAYAAEVETSFRLLSGRLLAVTRVRG 1348
            +K +V EL  YRMLVE+AHDLISAH+ D+  +F YAS  F R+LG++   L G+  + LV PDDA  V   +   L    ++QV  Y +R     +   VE+SFR++  +L+A+TRV G
Sbjct:    1 MKNQVTELGAYRMLVEQAHDLISAHTTDDRTVFLYASNAFQRVLGISTEDLLGVQLIHLVHPDDAGRVTEALPPALLCNQVTQVVVYRLRHQQQEFT--VESSFRVVPTKLVAITRVGG 117
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BLAST of mRNA_P-littoralis_Contig20.188.1 vs. uniprot
Match: A0A662WZ67_9STRA (PAS domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WZ67_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 2.200e-11
Identity = 53/144 (36.81%), Postives = 80/144 (55.56%), Query Frame = 2 
Query:  917 REKLTRERNKNHSKKSRERKKALVNNLKKKVDELSPYRMLVEEAHDLISAHSADENVIFTYASGGFDRLLGVNPAGLKG--MSFLDLVDPDDAPGVLHCILSTLHRGGISQVQYHMRPPPGAYAAEVETSFRLLSGRLLAVTRV 1342
            +E+ +RERN++HS+KSR RKK  V +LK +V +L  Y+ + E+  D I+  +A+ + IF Y+S  + R+LG  P  +     SFLDLV PD+A  V          G   + Q+ ++   G Y    ETS RL    ++  TRV
Sbjct:  238 KEEKSRERNRDHSRKSRLRKKEFVESLKHEVGQLQVYQQICEQCLDCIALVAAESSAIFLYSSAAYTRVLGYQPHQIVPGQTSFLDLVHPDNAQEVRAVFTKFSTLGETRRFQFRIKSMEGEYF-RAETSARLAEKGVVCSTRV 380
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BLAST of mRNA_P-littoralis_Contig20.188.1 vs. uniprot
Match: A0A8K1CMV1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMV1_PYTOL)

HSP 1 Score: 75.5 bits (184), Expect = 2.060e-10
Identity = 53/144 (36.81%), Postives = 81/144 (56.25%), Query Frame = 2 
Query:  917 REKLTRERNKNHSKKSRERKKALVNNLKKKVDELSPYRMLVEEAHDLISAHSADENVIFTYASGGFDRLLGV-NPAGLKGM-SFLDLVDPDDAPGVLHCILSTLHRGGISQVQYHMRPPPGAYAAEVETSFRLLSGRLLAVTRV 1342
            +E+ +RERN++HS+KSR RKK  V +LK++V++L  Y+ + E   DLI+  +++   I  Y SG   R+LG  N   + G  SFLDLV PD  P V +      + G   + Q+ ++   G Y    ETS R+    ++  TRV
Sbjct:  272 KEEKSRERNRDHSRKSRLRKKEYVESLKQEVEQLRIYQQICEHNPDLIALVTSEPKAILLYTSGSHGRVLGFQNHHLVPGQTSFLDLVHPDHVPEVRNVFQKLCNVGDSKRFQFRIKSVDGEYY-NAETSARVADKGVVCSTRV 414
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BLAST of mRNA_P-littoralis_Contig20.188.1 vs. uniprot
Match: A0A2P4XPB1_9STRA (PAS domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XPB1_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 8.790e-9
Identity = 48/144 (33.33%), Postives = 80/144 (55.56%), Query Frame = 2 
Query:  917 REKLTRERNKNHSKKSRERKKALVNNLKKKVDELSPYRMLVEEAHDLISAHSADENVIFTYASGGFDRLLGV-NPAGLKGM-SFLDLVDPDDAPGVLHCILSTLHRGGISQVQYHMRPPPGAYAAEVETSFRLLSGRLLAVTRV 1342
            +E+ +RERN++HS+KSR RKK  V +LK +V +L  Y+ + E+  D I+  +A+ + +F ++S  + R+LG  N   + G  SFLD+V PD+   V          G   + ++ ++   G Y    ET+ RL    ++  TRV
Sbjct:  139 KEEKSRERNRDHSRKSRLRKKEFVESLKHEVGQLQVYQQICEQCMDCIALVAAEASAVFLFSSAAYTRVLGYQNHQIVPGQTSFLDMVHPDNVQEVRAVFTKLNTLGETHRFKFRIKSTDGEYFP-AETTARLAEKGVVCSTRV 281
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BLAST of mRNA_P-littoralis_Contig20.188.1 vs. uniprot
Match: A0A3F2RI15_9STRA (PAS domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RI15_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 9.520e-9
Identity = 48/144 (33.33%), Postives = 80/144 (55.56%), Query Frame = 2 
Query:  917 REKLTRERNKNHSKKSRERKKALVNNLKKKVDELSPYRMLVEEAHDLISAHSADENVIFTYASGGFDRLLGV-NPAGLKGM-SFLDLVDPDDAPGVLHCILSTLHRGGISQVQYHMRPPPGAYAAEVETSFRLLSGRLLAVTRV 1342
            +E+ +RERN++HS+KSR RKK  V +LK +V +L  Y+ + E+  D I+  +A+ + +F Y+S  + R+LG  N   + G  SFLD+V PD+   V          G   + ++ ++   G +    ET+ RL    ++  TRV
Sbjct:  247 KEEKSRERNRDHSRKSRLRKKEFVESLKHEVGQLQVYQQICEQCMDCIALVAAEASAVFLYSSAAYTRVLGYQNHQIVPGQTSFLDMVHPDNVQDVRSVFTKLTTLGETYRFKFRIKSMDGEFF-NAETTARLAEKGVVCSTRV 389
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BLAST of mRNA_P-littoralis_Contig20.188.1 vs. uniprot
Match: A0A3M6VUN5_9STRA (PAS domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VUN5_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 2.980e-8
Identity = 48/144 (33.33%), Postives = 80/144 (55.56%), Query Frame = 2 
Query:  917 REKLTRERNKNHSKKSRERKKALVNNLKKKVDELSPYRMLVEEAHDLISAHSADENVIFTYASGGFDRLLGV-NPAGLKGM-SFLDLVDPDDAPGVLHCILSTLHRGGISQVQYHMRPPPGAYAAEVETSFRLLSGRLLAVTRV 1342
            +E+ +RERN++HS+KSR RKK  V +LK +V +L  Y+ + E+  D I+  +A+ + IF ++S  + R+LG  N   + G  SFLD+V PD+   V          G   + ++ ++   G Y    ET+ R+    ++  TRV
Sbjct:  248 KEEKSRERNRDHSRKSRLRKKEFVESLKHEVGQLQVYQQICEQCMDCIALVAAEASAIFLFSSAAYTRVLGYQNHQIVPGQTSFLDMVHPDNVQEVRAVFTKLNTLGETHRFKFRIKSMDGEYF-NAETTARMAEKGVVCSTRV 390
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BLAST of mRNA_P-littoralis_Contig20.188.1 vs. uniprot
Match: A0A2D4C1Z3_PYTIN (PAS domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1Z3_PYTIN)

HSP 1 Score: 68.2 bits (165), Expect = 4.250e-8
Identity = 48/144 (33.33%), Postives = 76/144 (52.78%), Query Frame = 2 
Query:  917 REKLTRERNKNHSKKSRERKKALVNNLKKKVDELSPYRMLVEEAHDLISAHSADENVIFTYASGGFDRLLGVNPAGL--KGMSFLDLVDPDDAPGVLHCILSTLHRGGISQVQYHMRPPPGAYAAEVETSFRLLSGRLLAVTRV 1342
            +E+ +RERN++HS+KSR RKK  V +LK +V +L  Y+ + E   DLI   +A+   +F + S  + R+LG   + L     SFLDLV P     V        + G   + ++ +R   G +  + ETS R+    ++  TRV
Sbjct:  262 KEEKSRERNRDHSRKSRLRKKEYVESLKMEVQQLQIYQQVCEYNQDLIXLVTAEPKAVFLFTSSSYARVLGYQGSQLIPGQASFLDLVHPSQVAEVRSIFQKFSNIGDFKRFRFRIRSADGEFF-DAETSARVAEKGVVCSTRV 404
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig20.188.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJL9_ECTSI1.800e-3847.96PAS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KYK0_9PHAE2.360e-3647.69PAS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KZ44_9PHAE5.000e-2443.67PAS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G032_ECTSI9.110e-1943.70Multi-sensor hybrid histidine kinase n=1 Tax=Ectoc... [more]
A0A662WZ67_9STRA2.200e-1136.81PAS domain-containing protein n=2 Tax=Nothophytoph... [more]
A0A8K1CMV1_PYTOL2.060e-1036.81Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2P4XPB1_9STRA8.790e-933.33PAS domain-containing protein n=1 Tax=Phytophthora... [more]
A0A3F2RI15_9STRA9.520e-933.33PAS domain-containing protein n=3 Tax=Phytophthora... [more]
A0A3M6VUN5_9STRA2.980e-833.33PAS domain-containing protein n=1 Tax=Peronospora ... [more]
A0A2D4C1Z3_PYTIN4.250e-833.33PAS domain-containing protein n=1 Tax=Pythium insi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig20contigP-littoralis_Contig20:813007..819585 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LJL9
PFAMsPAS_3
Model size3447
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue5.33e-41
EggNOG OGs2CNC0@1|root,2QV4B@2759|Eukaryota
Ec32 ortholog descriptionBasic leucine zipper and PAS domain protein
Ec32 orthologEc-17_002510.1
DescriptionPAS domain
Cds size1563
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig20.188.1prot_P-littoralis_Contig20.188.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig20 813119..817813 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789979.5811682-UTR-P-littoralis_Contig20:813006..8131181680789979.5811682-UTR-P-littoralis_Contig20:813006..813118Pylaiella littoralis U1_48UTRP-littoralis_Contig20 813007..813118 +
1680789979.64932-UTR-P-littoralis_Contig20:817813..8195851680789979.64932-UTR-P-littoralis_Contig20:817813..819585Pylaiella littoralis U1_48UTRP-littoralis_Contig20 817814..819585 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789979.5964055-CDS-P-littoralis_Contig20:813118..8138371680789979.5964055-CDS-P-littoralis_Contig20:813118..813837Pylaiella littoralis U1_48CDSP-littoralis_Contig20 813119..813837 +
1680789979.607425-CDS-P-littoralis_Contig20:815600..8157751680789979.607425-CDS-P-littoralis_Contig20:815600..815775Pylaiella littoralis U1_48CDSP-littoralis_Contig20 815601..815775 +
1680789979.616294-CDS-P-littoralis_Contig20:816272..8164071680789979.616294-CDS-P-littoralis_Contig20:816272..816407Pylaiella littoralis U1_48CDSP-littoralis_Contig20 816273..816407 +
1680789979.6272008-CDS-P-littoralis_Contig20:816941..8170431680789979.6272008-CDS-P-littoralis_Contig20:816941..817043Pylaiella littoralis U1_48CDSP-littoralis_Contig20 816942..817043 +
1680789979.6357138-CDS-P-littoralis_Contig20:817381..8178131680789979.6357138-CDS-P-littoralis_Contig20:817381..817813Pylaiella littoralis U1_48CDSP-littoralis_Contig20 817382..817813 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig20.188.1

>prot_P-littoralis_Contig20.188.1 ID=prot_P-littoralis_Contig20.188.1|Name=mRNA_P-littoralis_Contig20.188.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=521bp
MGGSGVASACCIDDSFQSLVEEASCGSSSSSSSGSCSCSCSGSGSGSGSR
GAGLKHFSISAAAVAPVAATSAAVSGFAGLVCPPRSALGPAALRAQPPKQ
NVSSVQKTAAAAVVSPCFEQRQWQQQRQQQRQQQQQQKKKKTPSVGDKPV
AKKRGGGSGSLKKPQQQQRQKQDPSSRVKNAREAPAAPEGGERARKTRRK
ASGASSEPKGGGGNKTAGRSSSSSSSGGGGGEGGAAMKKSKNSKPRKQSK
SEGTPSPCDLDGGFYVDEREKLTRERNKNHSKKSRERKKALVNNLKKKVD
ELSPYRMLVEEAHDLISAHSADENVIFTYASGGFDRLLGVNPAGLKGMSF
LDLVDPDDAPGVLHCILSTLHRGGISQVQYHMRPPPGAYAAEVETSFRLL
SGRLLAVTRVRGRSPHPVAPAPSSSPLHLADRGGAGRCRVKTEAEPVATT
TATAGAAAAAAGAAAAGGRTRPMSPLPLQPVLSPLVTLSDMEADGGVGTG
FGSDDGGWSAGELAEIAGLM*
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mRNA from alignment at P-littoralis_Contig20:813007..819585+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig20.188.1 ID=mRNA_P-littoralis_Contig20.188.1|Name=mRNA_P-littoralis_Contig20.188.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6579bp|location=Sequence derived from alignment at P-littoralis_Contig20:813007..819585+ (Pylaiella littoralis U1_48)
CTTCGCTGTTGGCCTATGTTCCTCCTCCGACTCCGAAGACGTGGAGCCCG
TCATCCTCTCCCCCTTACCCCGCCACCAGAACCCCCAGAGCTTCAACCGC
GGCGGTGGGAACATGGGCGGCAGCGGCGTCGCCAGCGCTTGCTGCATCGA
CGACAGTTTTCAGAGCCTCGTGGAAGAAGCTTCCTGCGGCAGCAGCAGCA
GCAGCAGCAGCGGAAGCTGCAGCTGCAGCTGCAGCGGCAGCGGCAGCGGC
AGCGGCAGCAGGGGGGCAGGGCTCAAGCACTTCAGCATTAGCGCTGCGGC
GGTGGCCCCTGTGGCGGCGACCTCTGCTGCCGTTTCCGGCTTTGCCGGGT
TGGTCTGTCCGCCTCGCAGTGCCCTGGGGCCGGCCGCGCTTCGGGCGCAG
CCCCCCAAGCAGAACGTTTCATCCGTGCAGAAGACGGCGGCAGCGGCGGT
GGTCTCTCCTTGTTTTGAGCAGCGGCAGTGGCAGCAACAGCGGCAGCAGC
AGCGGCAGCAGCAGCAGCAGCAAAAGAAGAAGAAAACGCCGTCGGTGGGC
GACAAACCTGTTGCCAAGAAGCGTGGCGGCGGCAGCGGCTCTCTAAAGAA
GCCACAGCAGCAACAGCGGCAGAAGCAAGACCCCAGTAGCAGGGTGAAGA
ACGCCAGAGAGGCACCTGCGGCTCCCGAGGGAGGAGAGAGGGCGCGCAAG
ACCCGCCGGAAGGCATCCGGGGCCAGCAGCGAGCCAAAGGGCGGTGGCGG
CAACAAGACTGCCGGTCGTAGCAGTAGCAGCAGCAGCAGCGGTGGTGGTG
GTGGTGAAGGGGGTGCGGCGATGAAGAAAAGGTGCGTGTATGATGTGTGT
GTGTATGCGCGCGCTCGTTCACCGCGGTGCCACACAGTGGCACATGTATG
GTGTTCGGGTTTACGTGGGTTTATAAGCTTTTTTGAAGCCCTGTACACGG
GTGACAAACATTTTCTTACTCCGTTTCTCTTTTGGTATTACAGTAGGCAC
AGCAGCGAGTGGTGATCCTGCAGTCCTCCAAGACAAATAATCCCATCGAC
TCGTCTCTGCGGCGCGCACGTGACTGCTCGGCGGTATCGAGAGCTGACGA
GACATTTGTGCGGCAAGCACACCTCGCGTCCCCGCGTCGGCGTCGTCGTC
GATCCCCCCCCAACCTTCCTCATCACCAGAAGGAGCAAGAAATGAGACCC
TTCCCCTTCGCCCCGCTTGGAAGCAAGAATACCAACTAAAAAATACCTAA
ACAACCCCCCCCCCCCCCTCGAAATGAACACAGCAAAGTCGACCCCCCCC
AACCTTCCTCATCACCAGAAGGAGCAAGAAATGAGACCCTTCCCCTTCGC
CCCGCTTGGAAGCAAGAATACCAACTAAAAAATACCTAAACAACCCCCCC
CAACCTTCCTCATCACCAGAAGGAGCAAGAAATGAGACCCTTCCCCTTCG
CCCCGCTTGGAAGCAAGACTACCAACTAAAAAATACCTAAACAACCCCCC
CCCCCCCCTCGAAATGAACACAGCAAAGTCGACCCCCCCCAACCTTCCTC
ATCACCAGAAGGAGCAAGAAATGAGACCCTTCCCCTTCGCCCCGCTTGGA
AGCAAGACTACCAACTAAAAAATACCTAAACAACCCCCCCCCCTCGAAAT
GAACACAGCAAAGTCGACCCCCCCAACCTTCCTCATCACCAGAAGGAGCA
AGAAATGAGACCCTTCCCCTTCGCCCCGCTTGGAAGCAAGAATACCAACT
AAAAAATACCTAAGCAACCCCCCCCCCCCCCTCGAAATGAACACAGCAAA
GTCGACCCCCCCCAACCTTCCTCATCACCAGAAGGAGCAAGAAATGAGAC
CCTTCCCCTTCGCCCCGCTTGGAAGCAAGAATACCAACTAAAAAATACCT
AAGCAACCCCCCCCTCGAAATGAACACAGCAAAGTCGACCCCCCCCAACC
TTCCTCATCACCAGAAGGAGCAAGAAATGAGACCCTTCCCCTTCGCCCCG
CTTGGAAGCAAGAATACCAACTAAAAAATACCTAAACAACCCCCCCCTCG
AAATGAACACAGCAAAGTCGACCCCCCCAACCTTCCTCATCACCAGAAGG
AGCAAGAAATGAGACCCTTCCCCTTCGCCCCGCTTGGAAGCAAGACTACC
AACTAAAAAATACCTAAACAACCCCCCCCTCGAAATGAACACAGCAAAGT
CGACCCCCCCAACCTTCCTCATCACCAGAAGGAGCAAGAAATGAGACCCT
TCCCCTTCGCCCCGCTTGGAAGCAAGACTACCAACTAAAAAATACCTAAA
CAACCCCCCCCCCTCGAAATGAACACAGCAAAGTCGACCCCCCAACCTTC
CTCATCACCAGAAGGAGCAAGAAATGAGACCCTTCCCCTTCGCCCCGCTT
GGAAGCAAGAATACCAACTAAAAAATACCTAAACAACCCCCCCCTCGAAA
TGAACACAGCAAAGTCGACCCCCCCAACCTTCCTCATCACCAGAAGGAGC
AAGAAATGAGACCCTTCCCCTTCGCCCCGCTTGGAAGCAAGAATACCAAC
TAAAAAATACCTAAACAACCCCCCCCCCCTCGAAATGAACACAGCAAAAA
CAGTAAGCCGCGCAAGCAATCGAAGAGTGAGGGGACACCTTCCCCATGCG
ACTTGGACGGAGGCTTTTATGTCGATGAGCGAGAGAAGCTGACCCGCGAG
AGGAACAAGAATCACTCGAAAAAGTCTCGGGAGCGCAAGAAAGCGCTGGT
GAACAACCTCAAAAAGAAGGTGTGTGCGCGTGCGTACGGTGTGTGCGTGT
TTGTTAAAACGAAAAGAGGCGTGCGCGGGGGGAAAGCGCTTGAGGAGGAC
CTCGAGAAGCTGGGGGGGCCGGGGGGACGGGGGGTTGGAATATGCTCGCT
GTCGCTGGCAGCGTATGATTGATACGAGAATTTATGGGGGCCCGTGTACT
ACTTGCTACTGTGATGTGTTTGCTTATTTCATTTTTCACGAAGTATTGGT
CTTTTTGTTTGTTTATCAGGTACTTGTATGTGTTTTGTCTGCTTCGCATT
GTTTGTTTTGTTCGTCATTCCATCCGTGCATTCTGGCTTTCGTCGTCTCT
CGCCCGTATATATGTGTACGCAGCATCCGGCAGCCACACACACCATTACA
CACATCACAGGGCAACACAACATGACGGTTCTGTAACTTGTTGTTCTTGA
TGTTATTCTTAGAGGTATGTTCAATGTTTTGCTCGTTTTTTGTTTCAATC
ATCAAATCGCATCCAGGTGGACGAGCTCAGCCCCTACCGCATGCTGGTGG
AGGAAGCCCACGACCTAATCTCTGCCCACTCGGCCGACGAGAACGTCATC
TTCACCTACGCTTCCGGTGGCTTCGACAGGCTCCTCGGGGTCAACCCAGC
GGTAAGCAGGGGCGGGCGTGCGGTGGCCAAATACTGGTGTTAGGCGATGC
TCCTAAGTACCTGGTACGCTGTCAGTGATGCAAGGGGCCATGATGCTGCT
GTGCGACGAAACAGGTTGCTGTCCCACAATACAGCAGTCTCAGCGTCTGA
CTACTGCTGTGTTCCTGACTCGAGCACAGCAGGTGGCAGGGCAGGGCAGG
GCAGGGCGAGTTGCAGGCGTTTTGACCAATCGGCAGGAACCGCCGTGCAG
CTTTGTGTGCCCCGTACGTTTGAGAATGTTTTTTGTGTTTCGATTGTACA
AAGCCTCCTGTATCACACGAAAAGTGTGAGAACGACACAGGAGTGTGTCA
CGAGACAGCCGCCCACCCACCCACCCACCCACGCACCCACCTGCGTCATC
ATGCTTCTTGTGTGAATGTTCTTTGGTGGCTGCTTTATCGCGTCATCATG
TTTCTTGTGTTTGGTTTTTGGTGGCTGCCTTACTGCTTCATCATGTTTAT
TTTTCGTATGTTTTTTGGTGGCTGATTTTTGACAGGGACTGAAAGGAATG
TCGTTCCTGGATCTAGTAGACCCCGACGACGCTCCTGGGGTGCTTCACTG
CATCCTCTCCACCCTGCACCGCGGGGGGATCAGTCAGGTACGTTTTTCGA
TGTCTATTTTTTTTATTCATATATCCATTTGTCGAATCTTTTTTTTACGA
TTTGTTTGAATGGAAAGCAGTCGGGTCGGGCCGGGTCGGTCGTTTTTTTT
TCCTGTTTTTGATTACCATCTTCGTCTTGTCTGCGTGATGCATGAGTTTT
GTGTTTTTTTTACACGAGCAGCAGAGAGACATGTATGCGCTCACTAAAAA
TGCAATCGTGTAAATAACCCCCCCCGCGCCTTCTTTCTCCCATTTGTCCG
CCGCGCCCCCCCCTCAACATATAAATATTCAAACCCATGATCCACACCAC
TCCCCTCTGTAAAACAACAAATCAGGTGCAGTACCACATGCGTCCACCGC
CGGGCGCATACGCCGCAGAGGTGGAAACCTCCTTCCGGCTTTTGTCCGGG
CGCCTTCTCGCGGTGACGCGAGTGAGGGGCCGGAGCCCGCACCCCGTCGC
TCCGGCGCCGTCGTCCTCCCCTCTCCACCTAGCGGACAGGGGTGGTGCTG
GTCGTTGCCGGGTGAAGACGGAGGCGGAGCCTGTAGCGACGACGACGGCT
ACTGCTGGTGCTGCTGCAGCGGCAGCGGGGGCCGCCGCCGCGGGCGGTCG
TACTCGTCCCATGTCACCGCTGCCTTTGCAGCCGGTCCTGTCTCCGCTCG
TAACCTTGTCGGACATGGAGGCGGACGGGGGGGTCGGAACGGGGTTCGGA
TCTGATGATGGTGGCTGGAGCGCGGGGGAGCTCGCCGAGATCGCCGGGCT
GATGTAGGGCCGTGTTTGATTTTCTGCTCGAGGAAGGAGGGAGAGAAGGA
GGTTGAGGTGATGTGTGATGGGACGGGACGGGAAGTAAACCAAGACCAAT
CCCTCGTTGCTTGGATTTGGGACACGTTGACTGGGGTGTGTTGTGTATGT
GTTGTGCGTGTGTGTTGTGTTGTGTTTGTGTGTCGTGTGTCGTGGGTGTG
GGTGTGGGTGTGTGTGTTTTTTTGTTTCTTGTTTGCAGGCGTGCGAGTTC
GTGCTTGCTTGTCCTGGTTGGTATTTAGATGTCTTAGATTGTGTGTGTGG
CATAGTTTGTGTGTTTATTGAAAATTCATATACGAAGTACAAGTACAATT
TTTGCAGGAGACGGGGATACTGCAGCGCATTCCATCCGTCCGTCAGTTTG
CTTGACTGTCAGCGACGAATACGTACATTTGATGTCTTTTCGAGTGATTC
TGTGGCATCGTGTGCGTTGTTTTCCGTTAAAGCTGGCGTGCTCTTTGTTG
TTTTTTTGTTAGATCGAGGTATCGGCGGGTGTAAACACATATGATGTTCT
CTGTGCTTACCACCTACGGTCTACGGTGGCCATGGTGAGATATTATTTTT
ATTTTTTTACAGAGATAACCGATGTCGGTGGTCGTTTTTTTTTGTTTCTC
AAATGACCAAACGGGGGTAAAATTGATCTTGTATCGAGCAGCCATTCATC
CGGCGGGGTCAAGTGCAGTCAATACCGGTCGATTAATTTTGTTTTCGTGA
TTTTTTACGTGCCCGACAGAGGGGTCGTTTGCATCATTGACGATCTAGTA
CACACGAAACCGCAGCAGCACAGAAATGTCAGCGGGAGAGAGCGGTAACA
ACGTTTCACAGGCAAAAAGACTGGTTGTGTGTTGTGATCGCGCGTGTGTG
TGTGTGTGTTGCCCTCGTGCGGGTACGAGACTGGCATCATGTACAGTGAG
TGTTTTTGTTTTTTACTTTTATTCTTTAAAGAGGAGAGAACAAGTTCACA
TACTCGTGCTGTCTGCCTGTGTGTGGATGATTGATAGGTTTGGTTCAAAG
TAGAACACCTTTTTTGGATAATAGGAAGCTCGAGTTTTGCTTGTAGGAGA
AGCACGGCGGGTCTTGATAATAAAAGTTGATTGTCTAGTTCGGTGTTTGT
TTGTTTGTTTGTTTGCGTGTTGACCTCACGTTTAGGTTTACCGGTGTCTT
CGCATCTCGCATGAAGAGCTTGTCTGTGCGAGGGATCCGTAAACCCGAAC
CCCACCACAACTACCCCCTCCCCCTTGCTGCCGGGAAGAATTAGTTACCA
TGACTTGGCCCCCTTTTGGAAAGCTGTGGGCTCGACTGTTACTCTTTTTG
AGAGTTTTCAAACTGAGCCGTGTTTTGTGTTTTTATACGTACGTAATTTC
AGAAATATTCATCTAGTACTTGTTCTATTTTTCTTGTTTTCGAGTTTGTG
CCCTTTCTTTCTCTTTACAGCCATTAAGTTTAGCCAAAACTCGTTCGGAG
GCTGTTATACTTAATACTGCTCTTGCTCCTACCGGTCAAGTTTGGCGAAG
ACTCGTCTGGAGGCGATGATACTTGAACCGCTCTTCTTCCTATGGTTTAG
TCTAGCCAACTCTCGTTCGGCAGGCTTCTTCCTCTGATGCGCATGTGTAA
AGGACTTATTTGCCTGACCGAGTGGATTTGATCAAGTGATACACGGGGCA
CTAGGCACTGACTTATTCTGGGCGTTAGTTGTTATTTTAGAATCACGATG
GTGTGTTCGCTTTTTGTTTTTAAGGCTAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig20:813007..819585+

>mRNA_P-littoralis_Contig20.188.1 ID=mRNA_P-littoralis_Contig20.188.1|Name=mRNA_P-littoralis_Contig20.188.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1563bp|location=Sequence derived from alignment at P-littoralis_Contig20:813007..819585+ (Pylaiella littoralis U1_48)
ATGGGCGGCAGCGGCGTCGCCAGCGCTTGCTGCATCGACGACAGTTTTCA
GAGCCTCGTGGAAGAAGCTTCCTGCGGCAGCAGCAGCAGCAGCAGCAGCG
GAAGCTGCAGCTGCAGCTGCAGCGGCAGCGGCAGCGGCAGCGGCAGCAGG
GGGGCAGGGCTCAAGCACTTCAGCATTAGCGCTGCGGCGGTGGCCCCTGT
GGCGGCGACCTCTGCTGCCGTTTCCGGCTTTGCCGGGTTGGTCTGTCCGC
CTCGCAGTGCCCTGGGGCCGGCCGCGCTTCGGGCGCAGCCCCCCAAGCAG
AACGTTTCATCCGTGCAGAAGACGGCGGCAGCGGCGGTGGTCTCTCCTTG
TTTTGAGCAGCGGCAGTGGCAGCAACAGCGGCAGCAGCAGCGGCAGCAGC
AGCAGCAGCAAAAGAAGAAGAAAACGCCGTCGGTGGGCGACAAACCTGTT
GCCAAGAAGCGTGGCGGCGGCAGCGGCTCTCTAAAGAAGCCACAGCAGCA
ACAGCGGCAGAAGCAAGACCCCAGTAGCAGGGTGAAGAACGCCAGAGAGG
CACCTGCGGCTCCCGAGGGAGGAGAGAGGGCGCGCAAGACCCGCCGGAAG
GCATCCGGGGCCAGCAGCGAGCCAAAGGGCGGTGGCGGCAACAAGACTGC
CGGTCGTAGCAGTAGCAGCAGCAGCAGCGGTGGTGGTGGTGGTGAAGGGG
GTGCGGCGATGAAGAAAAGCAAAAACAGTAAGCCGCGCAAGCAATCGAAG
AGTGAGGGGACACCTTCCCCATGCGACTTGGACGGAGGCTTTTATGTCGA
TGAGCGAGAGAAGCTGACCCGCGAGAGGAACAAGAATCACTCGAAAAAGT
CTCGGGAGCGCAAGAAAGCGCTGGTGAACAACCTCAAAAAGAAGGTGGAC
GAGCTCAGCCCCTACCGCATGCTGGTGGAGGAAGCCCACGACCTAATCTC
TGCCCACTCGGCCGACGAGAACGTCATCTTCACCTACGCTTCCGGTGGCT
TCGACAGGCTCCTCGGGGTCAACCCAGCGGGACTGAAAGGAATGTCGTTC
CTGGATCTAGTAGACCCCGACGACGCTCCTGGGGTGCTTCACTGCATCCT
CTCCACCCTGCACCGCGGGGGGATCAGTCAGGTGCAGTACCACATGCGTC
CACCGCCGGGCGCATACGCCGCAGAGGTGGAAACCTCCTTCCGGCTTTTG
TCCGGGCGCCTTCTCGCGGTGACGCGAGTGAGGGGCCGGAGCCCGCACCC
CGTCGCTCCGGCGCCGTCGTCCTCCCCTCTCCACCTAGCGGACAGGGGTG
GTGCTGGTCGTTGCCGGGTGAAGACGGAGGCGGAGCCTGTAGCGACGACG
ACGGCTACTGCTGGTGCTGCTGCAGCGGCAGCGGGGGCCGCCGCCGCGGG
CGGTCGTACTCGTCCCATGTCACCGCTGCCTTTGCAGCCGGTCCTGTCTC
CGCTCGTAACCTTGTCGGACATGGAGGCGGACGGGGGGGTCGGAACGGGG
TTCGGATCTGATGATGGTGGCTGGAGCGCGGGGGAGCTCGCCGAGATCGC
CGGGCTGATGTAG
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