prot_P-littoralis_Contig197.78.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig197.78.1
Unique Nameprot_P-littoralis_Contig197.78.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length170
Homology
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BLAST of mRNA_P-littoralis_Contig197.78.1 vs. uniprot
Match: A0A6H5KJA8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA8_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 2.490e-16
Identity = 68/159 (42.77%), Postives = 77/159 (48.43%), Query Frame = 0 
Query:    6 FPHPGVVYPIVPMGHKRLPRRQSQPRPRPLRGKDSKNDXXXXXXXXXXXXXXXXXXXXXXXLFHFISPASSPASPRTDVARGRPESFVTQGAMTPGRRNYGGLFDCLEAMCANGRDDFSLEAMGSTGDVTDLVESHPCTSLRYTESRKLEYDEFYARIS 164
            F  PGVVYPI P GH RLPR +     RP  G+  +                XXXXXXXXX                   R     FV QG M   RRNY  L  CLEAMC+ GRD++ L A+G+ GD+ D V    C   R TE R LEY EFYA IS
Sbjct:   12 FRRPGVVYPIHPTGHLRLPRPK-----RPFAGQQQR-------WRRHLSGREXXXXXXXXXXXXXXXXXXXXXXXXXXXXREEDVVFVVQGNMQSHRRNYPELTRCLEAMCSTGRDNYQLVAVGARGDLPDDVRRMQCVEQRTTEWRHLEYPEFYANIS 158
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig197.78.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJA8_9PHAE2.490e-1642.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig197contigP-littoralis_Contig197:318720..323981 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig197.78.1mRNA_P-littoralis_Contig197.78.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig197 314005..324043 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig197.78.1 ID=prot_P-littoralis_Contig197.78.1|Name=mRNA_P-littoralis_Contig197.78.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=170bp
MLRLRFPHPGVVYPIVPMGHKRLPRRQSQPRPRPLRGKDSKNDDDDGGGG
GSGGGGGSGGGGGGGGLFHFISPASSPASPRTDVARGRPESFVTQGAMTP
GRRNYGGLFDCLEAMCANGRDDFSLEAMGSTGDVTDLVESHPCTSLRYTE
SRKLEYDEFYARISLGTLS*
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