prot_P-littoralis_Contig178.77.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig178.77.1
Unique Nameprot_P-littoralis_Contig178.77.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length121
Homology
BLAST of mRNA_P-littoralis_Contig178.77.1 vs. uniprot
Match: A0A6H5KFX8_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFX8_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 2.370e-19
Identity = 50/111 (45.05%), Postives = 67/111 (60.36%), Query Frame = 0
Query:    1 MYARTSLRAFVDLLEGSDVVIEHVVRVSYKLTATAASNVVVLGAGGVYLCSCLQLLQHGFPCRHVFAVMQ--LQGPALLSTCCTFDANCVHPRWRNIRSLQDEKWTASELV 109
            M+ARTSL  F+ L +  DV    +  V YKLT    S+++V G G  +LCSCL+LLQHG PCRH FAV+   +    L  +  TF+A CVH RWR    + DE W+ S ++
Sbjct:  103 MWARTSLEDFLSLTQ--DVPTSAIFAVRYKLTPNRPSHLMVFGPGDFHLCSCLRLLQHGLPCRHYFAVLLSFIGEKDLPGSGHTFNAACVHNRWRQAPDVDDEPWSVSLVL 211          
BLAST of mRNA_P-littoralis_Contig178.77.1 vs. uniprot
Match: A0A6H5JP13_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP13_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 4.060e-19
Identity = 50/111 (45.05%), Postives = 67/111 (60.36%), Query Frame = 0
Query:    1 MYARTSLRAFVDLLEGSDVVIEHVVRVSYKLTATAASNVVVLGAGGVYLCSCLQLLQHGFPCRHVFAVMQ--LQGPALLSTCCTFDANCVHPRWRNIRSLQDEKWTASELV 109
            M+ARTSL  F+ L +  DV    +  V YKLT    S+++V G G  +LCSCL+LLQHG PCRH FAV+   +    L  +  TF+A CVH RWR    + DE W+ S ++
Sbjct:  466 MWARTSLEDFLSLTQ--DVPTSAIFAVRYKLTPNRPSHLMVFGPGDFHLCSCLRLLQHGLPCRHYFAVLLSFIGEKDLPGSGHTFNAACVHNRWRQAPDVDDEPWSVSLVL 574          
BLAST of mRNA_P-littoralis_Contig178.77.1 vs. uniprot
Match: A0A6H5KBY4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBY4_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 5.720e-19
Identity = 54/114 (47.37%), Postives = 68/114 (59.65%), Query Frame = 0
Query:    1 MYARTSLRAFVDLLEGSDVVIEHVVRVSYKLTATAASNVVVLGAGGVYLCSCLQLLQHGFPCRHVFAVM-QLQGPA----LLSTCCTFDANCVHPRWRNIRSLQDEKWTASELV 109
            M+ARTSL AF+DL+E  D+ IE VV V YK TA   S++VV G    +LCSCLQLL+   PCRH FAV+  L G       ++   TF+  CVH RWR      D  WT S ++
Sbjct:  924 MWARTSLSAFLDLIE--DIPIELVVAVRYKWTANRPSHLVVFGPHNFHLCSCLQLLRRRLPCRHYFAVLVNLIGRTGESDEMAFTHTFNGACVHNRWRRREDGNDSSWTISSVL 1035          
BLAST of mRNA_P-littoralis_Contig178.77.1 vs. uniprot
Match: A0A6H5KAB1_9PHAE (SWIM-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAB1_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 1.380e-18
Identity = 49/106 (46.23%), Postives = 64/106 (60.38%), Query Frame = 0
Query:    1 MYARTSLRAFVDLLEGSDVVIEHVVRVSYKLTATAASNVVVLGAGGVYLCSCLQLLQHGFPCRHVFAVMQ--LQGPALLSTCCTFDANCVHPRWRNIRSLQDEKWT 104
            M+ARTSL  F+ L +  DV    +  V YKLT    S+++V G G  +LCSCL+LLQHG PCRH FAV+   +    L  +  TF+A CVH RWR    + DE W+
Sbjct:  489 MWARTSLEDFLSLTQ--DVPTSAIFAVRYKLTPNRPSHLMVFGPGDFHLCSCLRLLQHGLPCRHYFAVLLSFIGEKDLPGSGHTFNAACVHNRWRQASDVDDEPWS 592          
BLAST of mRNA_P-littoralis_Contig178.77.1 vs. uniprot
Match: A0A6H5KG54_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG54_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 1.420e-18
Identity = 49/110 (44.55%), Postives = 66/110 (60.00%), Query Frame = 0
Query:    2 YARTSLRAFVDLLEGSDVVIEHVVRVSYKLTATAASNVVVLGAGGVYLCSCLQLLQHGFPCRHVFAVMQ--LQGPALLSTCCTFDANCVHPRWRNIRSLQDEKWTASELV 109
            +ARTSL  F+ L +  DV    +  V YKLT    S+++V G G  +LCSCL+LLQHG PCRH FAV+   +    L  +  TF+A CVH RWR    + DE W+ S ++
Sbjct:  658 WARTSLEDFLSLTQ--DVPTSAIFAVRYKLTPNRPSHLMVFGPGDFHLCSCLRLLQHGLPCRHYFAVLLSFIGDKYLPGSGHTFNAACVHNRWRQAPDVDDEPWSVSLVL 765          
BLAST of mRNA_P-littoralis_Contig178.77.1 vs. uniprot
Match: A0A6H5L372_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L372_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 1.640e-18
Identity = 52/114 (45.61%), Postives = 68/114 (59.65%), Query Frame = 0
Query:    1 MYARTSLRAFVDLLEGSDVVIEHVVRVSYKLTATAASNVVVLGAGGVYLCSCLQLLQHGFPCRHVFAVM-QLQGPA----LLSTCCTFDANCVHPRWRNIRSLQDEKWTASELV 109
            M+ARTSL AF+DL+E  D+ IE  V V YK  A   S++VV G    +LCSCLQLL+ G PCRH FAV+  L G       ++   TF+  CVH RWR    + D  W+ S ++
Sbjct:  237 MWARTSLSAFLDLIE--DIPIELFVAVRYKRAANRPSHLVVFGLHNFHLCSCLQLLRRGLPCRHYFAVLVNLIGRTGESDEMAFTHTFNGACVHNRWRRREVVNDSPWSISSVL 348          
BLAST of mRNA_P-littoralis_Contig178.77.1 vs. uniprot
Match: A0A6H5KB76_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB76_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 3.220e-17
Identity = 52/114 (45.61%), Postives = 70/114 (61.40%), Query Frame = 0
Query:    1 MYARTSLRAFVDLLEGSDVVIEHVVRVSYKLTATAASNVVVLGAGGVYLCSCLQLLQHGFPCRHVFAVM-QLQGPA----LLSTCCTFDANCVHPRWRNIRSLQDEKWTASELV 109
            M+ART L AF+DL+E  D+ IE VV V YK TA   S++VV G    +LCSCLQLL+ G PCR  FAV+  L G       ++   TF+ +CVH RWR  +  +D  W+ S ++
Sbjct:  514 MWARTLLSAFLDLIE--DIPIELVVAVRYKWTANRPSHLVVFGHHNFHLCSCLQLLRCGLPCRDYFAVLVNLIGRTGESDEMAFTHTFNGSCVHNRWRRRKDGKDLPWSISSVL 625          
BLAST of mRNA_P-littoralis_Contig178.77.1 vs. uniprot
Match: A0A6H5K9T1_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9T1_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 6.050e-17
Identity = 51/114 (44.74%), Postives = 65/114 (57.02%), Query Frame = 0
Query:    1 MYARTSLRAFVDLLEGSDVVIEHVVRVSYKLTATAASNVVVLGAGGVYLCSCLQLLQHGFPCRHVFAVM-QLQGPA----LLSTCCTFDANCVHPRWRNIRSLQDEKWTASELV 109
            M+AR SL AF+DL+E  D+ I+ VV V Y   A   S++VV G    +LCSCLQLL+ G PCRH FAV+  L G       ++   TF   CVH RWR      D  W+ S L+
Sbjct: 1147 MWARASLSAFLDLIE--DIPIQLVVAVRYMRAANRPSHLVVFGPHNFHLCSCLQLLRRGLPCRHYFAVLVNLIGRTGESDEMAFIHTFKGACVHNRWRRREDGNDSPWSISSLL 1258          
BLAST of mRNA_P-littoralis_Contig178.77.1 vs. uniprot
Match: A0A6H5KKN6_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKN6_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 1.160e-11
Identity = 38/69 (55.07%), Postives = 48/69 (69.57%), Query Frame = 0
Query:    1 MYARTSLRAFVDLLEGSDVVIEHVVRVSYKLTATAASNVVVLGAGGVYLCSCLQLLQHGFPCRHVFAVM 69
            M+A TSL A +DL+E  D+ IE VV V YK T    S++VV G   ++LCSCLQLL+ G PCRH FAV+
Sbjct:  273 MWAPTSLSASLDLIE--DIPIELVVAVRYKWTPNRPSHLVVFGPHNLHLCSCLQLLRRGLPCRHYFAVL 339          
BLAST of mRNA_P-littoralis_Contig178.77.1 vs. uniprot
Match: A0A6H5KN91_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN91_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 3.220e-8
Identity = 37/108 (34.26%), Postives = 55/108 (50.93%), Query Frame = 0
Query:    4 RTSLRAFVDLLEGSDVVIEHVVRVSYKLTA--TAASNVVVLGAGGVYLCSCLQLLQHGFPCRHVFAVMQLQGPALLSTCCTFDANCVHPRWRNIRSLQDEKWTASELV 109
            RTS++ FVD++EG DV +   +  S+   A   A  ++V LG  G  LC+CL+ L  G  CRH F  M+            F+  C+ PRWR+    ++  WT + L 
Sbjct:   47 RTSVKFFVDMVEGHDVDLLVRITTSFPNPAGGPAYGHLVALGPDGFVLCTCLRFLVDGLCCRHAFLAMREMDFG-------FNPGCIAPRWRD----EEMSWTLAPLA 143          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig178.77.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5KFX8_9PHAE2.370e-1945.05SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JP13_9PHAE4.060e-1945.05SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KBY4_9PHAE5.720e-1947.37SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KAB1_9PHAE1.380e-1846.23SWIM-type domain-containing protein (Fragment) n=1... [more]
A0A6H5KG54_9PHAE1.420e-1844.55SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L372_9PHAE1.640e-1845.61SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KB76_9PHAE3.220e-1745.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9T1_9PHAE6.050e-1744.74SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KKN6_9PHAE1.160e-1155.07SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KN91_9PHAE3.220e-834.26SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 29..73
score: 9.804279

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig178contigP-littoralis_Contig178:401632..401994 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig178.77.1mRNA_P-littoralis_Contig178.77.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig178 401632..402395 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig178.77.1 ID=prot_P-littoralis_Contig178.77.1|Name=mRNA_P-littoralis_Contig178.77.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=121bp
MYARTSLRAFVDLLEGSDVVIEHVVRVSYKLTATAASNVVVLGAGGVYLC
SCLQLLQHGFPCRHVFAVMQLQGPALLSTCCTFDANCVHPRWRNIRSLQD
EKWTASELVHDKHKWTAVGEG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007527Znf_SWIM