prot_P-littoralis_Contig173.78.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig173.78.1
Unique Nameprot_P-littoralis_Contig173.78.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length190
Homology
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BLAST of mRNA_P-littoralis_Contig173.78.1 vs. uniprot
Match: A0A6H5JUK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK3_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 4.320e-8
Identity = 57/181 (31.49%), Postives = 77/181 (42.54%), Query Frame = 0 
Query:   27 CCACRHPGPSDKSTRRAWRHIGAGECWYSLVEWEATAAGTWPHRRDLLQEPLQANECICSRVDCVSGLYSK--FRKQRAAAAGESSSF-------------VETGHRALLGRYPSLPQQVNDMMAHLDVGGLVLDCCGSTRDAVCRLLTERGFR----VQTNDINSRLPAGTHLDASGADF 188
            C AC   G   + TR        GE   S V+ EA  A  +P  + +          +C R  C+  LY K  + + R   A ++                V    R  L RY +LP+ V  +   + + G VLD CG   DAV +     GFR    V TND++SRL AGT+LDAS   F
Sbjct:   25 CSACLEWGQDFRHTRAR-----TGELVRSFVD-EAGIADKFPGFQSIAAGTNLL--ALCKRAGCLLELYQKQEWARSRERVARKAKQMPRHSRMWSAAPEPVTHDKRRRLDRYCTLPEAVEVLQNAVAIAGCVLDMCGGPEDAVAQ-----GFRSTCEVLTNDVSSRLSAGTNLDASLLSF 192
[Close]
BLAST of mRNA_P-littoralis_Contig173.78.1 vs. uniprot
Match: A0A6H5JUT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUT6_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 8.970e-7
Identity = 41/120 (34.17%), Postives = 56/120 (46.67%), Query Frame = 0 
Query:   84 ICSRVDCVSGLYSK--FRKQRAAAAGESSSF-------------VETGHRALLGRYPSLPQQVNDMMAHLDVGGLVLDCCGSTRDAVCRLLTERGFR----VQTNDINSRLPAGTHLDAS 184
            +C R  C+  LY K  + + R   A ++                V       L RY +LP+ V  +   + + G VLD CG   DAV +     GFR    V TND++SRL AGT+LDAS
Sbjct:   40 LCKRAGCLLELYQKQEWARSRERVARKAKQMPRHSRMWSAAPEPVTHDKCRRLDRYCTLPEAVEVLQNAVAIAGCVLDMCGGPEDAVAQ-----GFRSTCEVLTNDVSSRLSAGTNLDAS 154
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig173.78.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JUK3_9PHAE4.320e-831.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUT6_9PHAE8.970e-734.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig173contigP-littoralis_Contig173:429057..430525 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig173.78.1mRNA_P-littoralis_Contig173.78.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig173 428568..430955 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig173.78.1 ID=prot_P-littoralis_Contig173.78.1|Name=mRNA_P-littoralis_Contig173.78.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=190bp
MSASGRRGACGRSDHGLPSEDGTANLCCACRHPGPSDKSTRRAWRHIGAG
ECWYSLVEWEATAAGTWPHRRDLLQEPLQANECICSRVDCVSGLYSKFRK
QRAAAAGESSSFVETGHRALLGRYPSLPQQVNDMMAHLDVGGLVLDCCGS
TRDAVCRLLTERGFRVQTNDINSRLPAGTHLDASGADFV*
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