prot_P-littoralis_Contig172.55.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig172.55.1
Unique Nameprot_P-littoralis_Contig172.55.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length148
Homology
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BLAST of mRNA_P-littoralis_Contig172.55.1 vs. uniprot
Match: A0A6H5K312_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K312_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 4.860e-7
Identity = 40/88 (45.45%), Postives = 44/88 (50.00%), Query Frame = 0 
Query:   60 PPSEEAGPTRGRGARGAAAAAFANSNRTVASAGVPFPGSVDLRCFTREGIRELHVCLFPRVTDVENTGTRERDGMAGTSAEGARLVVA 147
            P  E+ GPTRG G  G  A AFA+S RTVAS GVP PGSV    F                      GT+ +DG  GTS EG RLV A
Sbjct:  260 PRCEKGGPTRGGGELGTGANAFADSRRTVASVGVPLPGSVAPAVFY---------------------GTQGKDGRGGTSVEGERLVNA 326
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig172.55.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K312_9PHAE4.860e-745.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig172contigP-littoralis_Contig172:338189..345089 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig172.55.1mRNA_P-littoralis_Contig172.55.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig172 337146..345130 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig172.55.1 ID=prot_P-littoralis_Contig172.55.1|Name=mRNA_P-littoralis_Contig172.55.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=148bp
MDSDATEVVVLLRKARRRLLSHRGPTSYPYWVIATAGAEEAEGEEIAEGA
VEQILGGAGPPSEEAGPTRGRGARGAAAAAFANSNRTVASAGVPFPGSVD
LRCFTREGIRELHVCLFPRVTDVENTGTRERDGMAGTSAEGARLVVA*
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