prot_P-littoralis_Contig170.91.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig170.91.1
Unique Nameprot_P-littoralis_Contig170.91.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length174
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig170.91.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027805Transposase, Helix-turn-helix domainPFAMPF13613HTH_Tnp_4coord: 136..174
e-value: 5.2E-9
score: 35.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig170contigP-littoralis_Contig170:361150..362396 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig170.91.1mRNA_P-littoralis_Contig170.91.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig170 361148..362396 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig170.91.1 ID=prot_P-littoralis_Contig170.91.1|Name=mRNA_P-littoralis_Contig170.91.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=174bp
RLEALNNRHHQALLEGATERLHLQHKIQLMVLKISELETELGEIKDSLGG
KADKAHPAAPGIARIDHSILIGKDSTQVRSLVGVSSHYSLEKLYEFLDAE
GAATHVVFYDKREGSGLKQTGERVSHRNGVFRGINGLFLTLMVLRTAVPL
VVASTLFGVHETTVGRAFTTWLNF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027805Transposase_HTH_dom