prot_P-littoralis_Contig17.2.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig17.2.1
Unique Nameprot_P-littoralis_Contig17.2.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length127
Homology
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BLAST of mRNA_P-littoralis_Contig17.2.1 vs. uniprot
Match: A0A6H5JZM6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZM6_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 1.340e-5
Identity = 41/92 (44.57%), Postives = 52/92 (56.52%), Query Frame = 0 
Query:    3 LMDRLFAHHDKQAQSSRHTSSGRPHSSXXXXXXXXXXXXGSGGHPNNNGKRPARHGKGRGGPPRERPKCTYSKCNKPLGHTIATCYQKARDE 94
            LMDR+F HH +    +    SG     XXXXXXXX    G+      N +RP R         +ERP+CT+  C+KPLGHT ATC+QK R+E
Sbjct:  130 LMDRMFEHHRQNRGRTPAFQSGSSXXXXXXXXXXXAPRHGTHRGXXGNSRRPVR---------KERPRCTHPTCDKPLGHTTATCFQKKREE 212
[Close]
BLAST of mRNA_P-littoralis_Contig17.2.1 vs. uniprot
Match: A0A6H5JC92_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC92_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 1.490e-5
Identity = 21/32 (65.62%), Postives = 25/32 (78.12%), Query Frame = 0 
Query:   64 PPRERPKCTYSKCNKPLGHTIATCYQKARDEK 95
            P   RP+CTYSKC KPLGHT  TC+Q+ RDE+
Sbjct:  208 PAAPRPRCTYSKCKKPLGHTFETCFQRQRDER 239
[Close]
BLAST of mRNA_P-littoralis_Contig17.2.1 vs. uniprot
Match: A0A6H5JFK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFK4_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 1.850e-5
Identity = 21/32 (65.62%), Postives = 25/32 (78.12%), Query Frame = 0 
Query:   64 PPRERPKCTYSKCNKPLGHTIATCYQKARDEK 95
            P   RP+CTYSKC KPLGHT  TC+Q+ RDE+
Sbjct:  357 PAAPRPRCTYSKCKKPLGHTFETCFQRQRDER 388
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig17.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JZM6_9PHAE1.340e-544.57Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JC92_9PHAE1.490e-565.63Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFK4_9PHAE1.850e-565.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig17contigP-littoralis_Contig17:4403..5644 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig17.2.1mRNA_P-littoralis_Contig17.2.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig17 4346..5836 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig17.2.1 ID=prot_P-littoralis_Contig17.2.1|Name=mRNA_P-littoralis_Contig17.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=127bp
MILMDRLFAHHDKQAQSSRHTSSGRPHSSSSGRPNISTSGRGSGGHPNNN
GKRPARHGKGRGGPPRERPKCTYSKCNKPLGHTIATCYQKARDEKKGRGN
EDDNDHEDKRARRHHRRSSDTDDEDN*
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