prot_P-littoralis_Contig17.182.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig17.182.1
Unique Nameprot_P-littoralis_Contig17.182.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length370
Homology
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BLAST of mRNA_P-littoralis_Contig17.182.1 vs. uniprot
Match: A0A6H5L1Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Y8_9PHAE)

HSP 1 Score: 228 bits (580), Expect = 4.360e-67
Identity = 165/280 (58.93%), Postives = 191/280 (68.21%), Query Frame = 0 
Query:   12 RQRPDPHGVLVTVPVAFNRYLGCGDAAFVLAEVLRHVLFMRGQLPMPYHQLLQASKASVLDEREERDHDAREKELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGDVCLASAAAVTSSKRRSTRVKSGRPLARTPAHRRARKGLGALDETTRAMEEAFADAAGRGRPVLEALILFGASHLSPSREIYSVTFTQPFPDEGSSKSEDVLQGGEQGGDANTTRSDGGGGTGSVQGKSSLADAYSRKLVRTVVGEMSSVDFRGLGSCRVHIFLRVADAPARD 291
            R+R  P    VTVPV F ++LG GDAA V+ EVLRHVLFMRGQLPMP+ QL++     VLDEREERD   R        XXXXXXXXXXXXXXXXX          G   L S       +RRS + KSGRPLA+ P HRRARKGL AL ETT A+EEAFADAA +GRPVLEAL+L GASHLSP REIYSVTF+    DE SS+S+D           NT  S      G ++GKSSLADAYSR LVR++VG+MSS+  RGLGSCRVH+FLR+A+ P +D
Sbjct:   25 RKRQHPEQQEVTVPVVFKQHLGSGDAAHVVIEVLRHVLFMRGQLPMPFQQLVK-----VLDEREERDEVDR--------XXXXXXXXXXXXXXXXXAREGRGRTREGGDALGSGLTGAVDRRRSKKAKSGRPLAKAPPHRRARKGLRALAETTLAVEEAFADAARKGRPVLEALVLLGASHLSP-REIYSVTFSGSCLDE-SSESKDTTT-------RNTASS------GDLRGKSSLADAYSRTLVRSMVGKMSSMPLRGLGSCRVHLFLRIAEGPVQD 276
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BLAST of mRNA_P-littoralis_Contig17.182.1 vs. uniprot
Match: D7FJH5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJH5_ECTSI)

HSP 1 Score: 219 bits (557), Expect = 2.860e-65
Identity = 160/280 (57.14%), Postives = 186/280 (66.43%), Query Frame = 0 
Query:   12 RQRPDPHGVLVTVPVAFNRYLGCGDAAFVLAEVLRHVLFMRGQLPMPYHQLLQASKASVLDEREERDHDAREKELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGDVCLASAAAVTSSKRRSTRVKSGRPLARTPAHRRARKGLGALDETTRAMEEAFADAAGRGRPVLEALILFGASHLSPSREIYSVTFTQPFPDEGSSKSEDVLQGGEQGGDANTTRSDGGGGTGSVQGKSSLADAYSRKLVRTVVGEMSSVDFRGLGSCRVHIFLRVADAPARD 291
            R+R  P  + VTVPV F ++L  GDAA V+ EVLRHVLFMRGQLPMP+ QL++     VLDEREE           XXXXXXXXXXXXXXXXXXXX          G   L S    T  +RRS + KSGRPLA+ P HRRARK L AL ETT A+EEAFADAA +GRPVLEAL+L GASHLSP R+IYSVTFT    DE S   +   +    GGD              V+GKS+LADAYSR LVR++VG+MSS+  RGLGSCRVH+FLR+A+ P  D
Sbjct:   25 RKRQHPEQLEVTVPVVFKQHLRSGDAAHVVIEVLRHVLFMRGQLPMPFQQLVK-----VLDEREE----------XXXXXXXXXXXXXXXXXXXXXAREGRGRTREGGDALGSGLTETVGRRRSKKAKSGRPLAKAPPHRRARKSLRALAETTLAVEEAFADAARKGRPVLEALVLLGASHLSP-RKIYSVTFTGSSLDESSESKDTATRNTASGGD--------------VRGKSNLADAYSRTLVRSMVGKMSSMPLRGLGSCRVHLFLRIAEGPVPD 274
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig17.182.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L1Y8_9PHAE4.360e-6758.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJH5_ECTSI2.860e-6557.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.900.20coord: 11..329
e-value: 1.2E-19
score: 72.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 204..246
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 345..369
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 225..246
IPR009511Mad1/Cdc20-bound-Mad2 binding proteinPANTHERPTHR15681MAD2L1-BINDING PROTEINcoord: 23..287

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig17contigP-littoralis_Contig17:763886..767875 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig17.182.1mRNA_P-littoralis_Contig17.182.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig17 763886..767875 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig17.182.1 ID=prot_P-littoralis_Contig17.182.1|Name=mRNA_P-littoralis_Contig17.182.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=370bp
ARPRKDRKVPKRQRPDPHGVLVTVPVAFNRYLGCGDAAFVLAEVLRHVLF
MRGQLPMPYHQLLQASKASVLDEREERDHDAREKELAAAAEAAAAAAARV
SAVTGGGGGGGGSTAGPGDVCLASAAAVTSSKRRSTRVKSGRPLARTPAH
RRARKGLGALDETTRAMEEAFADAAGRGRPVLEALILFGASHLSPSREIY
SVTFTQPFPDEGSSKSEDVLQGGEQGGDANTTRSDGGGGTGSVQGKSSLA
DAYSRKLVRTVVGEMSSVDFRGLGSCRVHIFLRVADAPARDPRSSEKPRS
TVATAAAAAAAALSIAGVSDENTSSSTFPTAGLSCGCPPTSCPSTRVQDS
RVAVTPRPAGESNSLTTLP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009511MAD1/Cdc20-bound-Mad2-bd