prot_P-littoralis_Contig17.149.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig17.149.3
Unique Nameprot_P-littoralis_Contig17.149.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1284
Homology
BLAST of mRNA_P-littoralis_Contig17.149.3 vs. uniprot
Match: D7FK42_ECTSI (DNA-directed DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK42_ECTSI)

HSP 1 Score: 1336 bits (3458), Expect = 0.000e+0
Identity = 855/1297 (65.92%), Postives = 946/1297 (72.94%), Query Frame = 0
Query:    1 MNNDGQRAVEWNLVPPESPPSGPALHNQAKNKPFALLKSLEAPRGPEYFAMEKFRRPLRSGXXXXXXXXXYDDGVGVDCGTRGFDNNXXXXXXXNENQQLSSFARGSV-------LHTPAASPREAGWGMTSFSPVLSQASSTMMTPLQQXXXXXXXXXXXFSMFGGKAHSTPVDCISSSGGTRRPPPLSSHTPIGNSAPAASHAETSRGSGGRT-IGGGLSRFKTLSQKTLEEEREEDEDESRRWGSDSGGSGPGEYTNRSAAPGVLNTPSSSLLSPTTGIGSLSPELLPFGGXXXXVGRHSVTTPSSLALSSLSSGGAPPTAATSRKRPRAPSXXXXSPARPVMMSGALQLTP--VVGSGGGG---DALVARTWGSMGDGDRGXXXXXXXXXXXXXXXXXXLKATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPPSQSPRGRGKVVGSGSPRLLQPPPLTRRYELADFAGADDVCFNPGASLEGLSIFLERCEASGAVLLSMLWADLTTNYSAVTIKSCQPSQSCFRWNCSCGRQPRARQATAPIIGAIVYLPATGERASQAALAGEEAWICSFRAVGGCSQVEDFPEGETYLLPLGACVGEDQEAAEAGGYQLPLQCEASYDERWGALAKIVAMPIKKVAFNAQVALMPLIAWRRRRESRDFVARSSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGCGATTSDGSHQQATTEYDLSTVAGLFDPRVAAWMSDTGSTGKALEFEALCVSWLKDEAANGESASVRSGGNGRSSAIVAAVTHAEGCSRRSLALAGKISAELDRAKMLAACEQVEMPAIPVLAGMEVSGVVFLPERVTRFSEALGRHLEGLERTAVEAVGGRDFNLASPDQVADILFKHLKLPAPPVKAGSVHASTSADVLARLQGKHAVVAPVLEFRGVHKYKTTYVDKLAERALGAAAADSAVPASQIAGVGAVRIHAAWNQTSARTGRLSCSRPNLQQIPKSSDPLTGVEGVNVRDAFAASKSFTLMAADYSQIEMRVLADACRDPGLRGLFASAGDGNTSNGANSGNKGRGDVYRKLAAQVFGKEESGITDAERTRAKVVCLGIIYGMGTPQVAKKLEITESQAQGLVRSFLRAFPGIEPFMAATRR----C---------ARETGYVCTLTGRRRHLPEINNSRNATMKAQAERQAVNSVVQGTAADIVKTAMVLVARRLDAWRSSLEEGLDCPRLIMQIHDELVLECPACEEDLERLKGLLAECMEVEAPAMLGIQCPLTVNMLVGMSWGSMRRVVSHDE 1271
            M+++ +    WNLVPP  PPSGPALH QAKN+PFALLKSLE PRGP+YF ME FRRPL             DD VG      G    XXXXXX   ++ +S  A           LHTP + PR  G GM SFSP LS+AS+TMMTP+QQ           FSMFGGKA+STP     S G     PPLSSHTPIG++ P  +      G GG + +GGGL+RFKTL Q+T               G   GGS  G     S A G + +PSS+ LSP++ +GS    L P          ++ T  S             P  A  RKRPRAPS    +  RP        +TP  V+  GGG    D   ARTWGS+ +G RG  XXXXXXXXXXXXXXXX     XXXXXXXXXXXXXXXXX                  +SPR       S SPR  QPPP  RRY+L DFAGADDVCFN  AS EGL+IFLERCEASG   LS+LWADLTT++SA+T+KSC PSQSCFRWNC+CGRQPRA+QATAP+IGA+VYLP   ER +  A AG E+         GCSQ +DF EGE YLLPL ACVGED+EAA+A GY LPL CE SYDERW A AK+VA+P+KKVA      LMPLIAWRRR ESR F+ARS+A XXXXXXXXXXXXXXXXXXXXXXXXXXX                    +T++   TV+GLFD RVAAWM+DTG   KALEFEALCVSWLK E ++ E  +  SG  GR  AIVAAV  AEGC RR+LALAGKISAEL+ AKMLAACEQVEMPAIPVLAGMEVSGVVFLPERVTRFS+ALG HLEGL+RTAV+AVGGRDFNLASPDQVAD+LFKHLKLP+PPVKAGSVHASTSA+VL  LQGKHAVVAP+LEFRGV+KYKTTYVDKLAERALGAAAA+SAVPASQ  G GA RIHA WNQTSARTGRLSCSRPNLQQ+PK SDPL GVEGVNVRDAF+A++SFTLMAADYSQIEMRVLADACRDPGLR LFA+ G  N + GA++G    GDVYRKLAAQVF KEE G++D ER RAKVVCLGI YGMGTPQVAKKLEITESQAQGLVRSFL+AFPGIEPFMAATRR    C         ARE GYVCTLTGRRRHLPEINNSRNA  KAQAERQAVNSVVQGTAADI+KTAMVLVARRLDAWRSSL+EGLDCPRLIMQIHDELVLECPACEEDLERLKGLLA+CMEVEAPA+LGI+CPLTVNMLVGMSWGSMRRVVSHDE
Sbjct:    1 MHSNTRPEAVWNLVPPGRPPSGPALHTQAKNRPFALLKSLEPPRGPDYFPMENFRRPL----------WPDDDRVGASGIGAGXXXXXXXXXXTASDRHISQAANARTSQHSSPHLHTPTSGPRGTGRGMASFSPALSRASTTMMTPVQQTQQKPEG----FSMFGGKAYSTPA----SHGSICSQPPLSSHTPIGSNTPTVAPGTIPYGGGGSSGVGGGLARFKTLVQETQXXXXXXXXXXXXXXGR--GGSSSGCGIRDSTARG-MPSPSSNFLSPSSLMGSPPNALTPCDDSPSSSAAYAFTPSSXXXXXXXXXXXXGPLTAAGRKRPRAPSTATAALGRP--------MTPGTVLSVGGGNLSADVSGARTWGSLAEGSRGRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------RSPRPARNKSPSQSPRTSQPPPTPRRYKLDDFAGADDVCFNAAASSEGLAIFLERCEASGVASLSVLWADLTTSFSAMTVKSCLPSQSCFRWNCACGRQPRAQQATAPMIGAVVYLPGRAERIAWGASAGTES------DTSGCSQEDDFEEGEMYLLPLAACVGEDKEAAKAAGYHLPLDCETSYDERWAAFAKLVALPVKKVA------LMPLIAWRRRPESRTFLARSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------HLSTKHHT-TVSGLFDTRVAAWMTDTGKADKALEFEALCVSWLKGEGSDAEGVNAGSGDGGRLPAIVAAVARAEGCCRRNLALAGKISAELEGAKMLAACEQVEMPAIPVLAGMEVSGVVFLPERVTRFSDALGNHLEGLKRTAVKAVGGRDFNLASPDQVADVLFKHLKLPSPPVKAGSVHASTSAEVLEGLQGKHAVVAPILEFRGVNKYKTTYVDKLAERALGAAAAESAVPASQ--GAGAARIHATWNQTSARTGRLSCSRPNLQQMPKGSDPLAGVEGVNVRDAFSATRSFTLMAADYSQIEMRVLADACRDPGLRNLFATLGGTNDA-GASTGG---GDVYRKLAAQVFAKEEHGVSDEERNRAKVVCLGITYGMGTPQVAKKLEITESQAQGLVRSFLKAFPGIEPFMAATRRYGTPCRHQISQRRFARENGYVCTLTGRRRHLPEINNSRNAAAKAQAERQAVNSVVQGTAADIMKTAMVLVARRLDAWRSSLDEGLDCPRLIMQIHDELVLECPACEEDLERLKGLLADCMEVEAPAVLGIKCPLTVNMLVGMSWGSMRRVVSHDE 1213          
BLAST of mRNA_P-littoralis_Contig17.149.3 vs. uniprot
Match: A0A6H5J5W8_9PHAE (POLAc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5W8_9PHAE)

HSP 1 Score: 658 bits (1698), Expect = 6.320e-216
Identity = 516/1032 (50.00%), Postives = 589/1032 (57.07%), Query Frame = 0
Query:   51 MEKFRRPLRSGXXXXXXXXXYDDGVGVDCGTRGFDNNXXXXXXXNENQQLSSFARGS-----VLHTPAASPREAGWGMTSFSPVLSQASSTMMTPLQQXXXXXXXXXXXFSMFGGKAHSTPVDCISSSGGTRRPPPLSSHTPIGNSAPAASHAETSRGSGGRT-IGGGLSRFKTLSQKTLEEEREEDEDESRRWGSDSGGSGPGEYTN---RSAAPGVLNTPSSSLLSPTTGIGSLSPELLPFGGXXXXVGRHSVTTPSSLALSSLSSGGAPPTAATSRKRPRAPSXXXXSPARPVMMSGALQLTP-VVGSGGGG----DALVARTWGSMGDGDRGXXXXXXXXXXXXXXXXXXLKATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPPSQSPRGRGKVVGSGSPRLLQPPPLTRRYELADFAGADDVCFNPG----------------------------ASLEGLSIFLERCEASGAVLLSMLWADLTTNYSAVTIKSCQPSQSCFRWNCSCGRQPRARQATAPIIGAIVYLPATGERASQAALAGEEAWICSFRA-----VGGCSQVEDFPEGETYLLPLGACVGEDQEAAEAGGYQLPLQCEASYDERWGALAKIVAMPIKKVAFNAQVALMPLIAWRRRRESRDFVARSSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGCGATTSDGSHQQATTEYDLSTVAGLFDPRVAAWMSDTGSTGKALEFEALCVSWLKDEAANG------ESASVRSGGNGRSSAIVAAVTHAEGCSRRSLALAGKISAELDRAKMLAACEQVEMPAIPVLAGMEVSGVVFLPERVTRFSEALGRHLEGLERTAVEAVGGRDFNLASPDQ--------------------------------------------------VADILFKHLKLPAPPVKAGSVHASTSADVLARLQGKHAVVAPVLEFRGVHKYKTTYVDKLAERALGAAAADSAVPASQIAGVGAVRIHAAWNQTSARTGRLSCSRPNLQQ 979
            MEKFRRPL               G+G   G RG           + +Q  ++ AR S      LHTP + PR  G GM SFSP LS+ASSTMMTP+QQ           FSMFGGKA+STP     S G     PPLSSHTPI ++    +      GSGG + +GGGL+RFKTL+Q+T EE+ ++ ++  RR     GGSG G  +    R +    + +PSS+ L+P++ +GS    L P          ++ T PSS A  S S+    P+ A  RKRPRAPS    +  RP        +TP  V S GGG    D   ARTWGS+ +G RG                   +A  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          GK             P  RRY+L DFAGADDVCFN                              AS EGL+IFLERCE SG   LS+LWADLTT++SA+T+KSC PSQSCFRWNC+CGRQ             + Y    G   S + L       C+  A       GCSQ +DF EGE YLLPLGACVGED+EAAEA GY LPL CE                          VALMPLIAWRRR ESR F+ARS+AA                 XXXXXXXXXX                    +T++   TV+ LFD RVAAWM+DTG   KALEFEALCVSWLK E ++       E  + RSG  GR  AIVAAV HAEGC RR+LALAGKISAEL+ AKMLAACEQVEMP +PVLAGMEVSGVVFLPERVTRFS ALG HLEGL+RTAV+AVGGRDFNLASPDQ                                                  VADILFKHLKLP+PP+KAGSVHASTSA+VL  LQGKHAVVAP+LEFRGV+KYKTTYVDKLAERALGAAAADSAVPASQ  G GA RIHA WNQTSARTGRLSCSRPNLQQ
Sbjct:    1 MEKFRRPLWPDDHRFGA-----SGIGAG-GERGHGKGPGTASDRHISQSFAN-ARTSQHSSPFLHTPTSGPRGTGGGMVSFSPALSRASSTMMTPVQQTQQQPGG----FSMFGGKAYSTPA----SHGSISSQPPLSSHTPIDSNTRTVAPGTIPYGSGGSSGVGGGLARFKTLAQETQEEDHKKQQE--RR-----GGSGRGNSSGCGIRDSTVRGMPSPSSNFLAPSSLMGSPPNSLTPCDDSPFSSAAYTFTPPSSAAPPSYSNWPTGPSTAAGRKRPRAPSTATAALGRP--------MTPGTVRSVGGGNLSADVSGARTWGSLAEGSRG-------------------RAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKXXXXXXXXXXXXSPTPRRYKLDDFAGADDVCFNAASTVQTSTMGRLPPYPATSPAVILPRNSAASSEGLAIFLERCEVSGVASLSVLWADLTTSFSAMTVKSCLPSQSCFRWNCACGRQ------------GLCYAFFRGVDPSPSLL------TCASAARTESDTSGCSQEDDFEEGEMYLLPLGACVGEDKEAAEAAGYHLPLDCE--------------------------VALMPLIAWRRRPESRTFLARSAAAAAEGGSDRDGHEPSVDSXXXXXXXXXX------------------HVSTKHHT-TVSRLFDTRVAAWMTDTGKADKALEFEALCVSWLKGEGSDAVHKPDAEGVNARSGDGGRLPAIVAAVVHAEGCCRRNLALAGKISAELEGAKMLAACEQVEMPTVPVLAGMEVSGVVFLPERVTRFSNALGNHLEGLKRTAVKAVGGRDFNLASPDQAKKQQIGKRMQQGRIDGSSRSRRRVASFRTGSCQRGLREGAHGGQGGGTAVADILFKHLKLPSPPLKAGSVHASTSAEVLEGLQGKHAVVAPILEFRGVNKYKTTYVDKLAERALGAAAADSAVPASQ--GAGATRIHATWNQTSARTGRLSCSRPNLQQ 918          
BLAST of mRNA_P-littoralis_Contig17.149.3 vs. uniprot
Match: A0A6H5JBL3_9PHAE (DNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL3_9PHAE)

HSP 1 Score: 450 bits (1157), Expect = 1.730e-145
Identity = 231/264 (87.50%), Postives = 243/264 (92.05%), Query Frame = 0
Query: 1008 MAADYSQIEMRVLADACRDPGLRGLFASAGDGNTSNGANSGNKGRGDVYRKLAAQVFGKEESGITDAERTRAKVVCLGIIYGMGTPQVAKKLEITESQAQGLVRSFLRAFPGIEPFMAATRRCARETGYVCTLTGRRRHLPEINNSRNATMKAQAERQAVNSVVQGTAADIVKTAMVLVARRLDAWRSSLEEGLDCPRLIMQIHDELVLECPACEEDLERLKGLLAECMEVEAPAMLGIQCPLTVNMLVGMSWGSMRRVVSHDE 1271
            MAADYSQIEMRVLADACRDPGLR LFA+ G  N + GA +G    GDVYRKLAAQVFGKEE  ++D ER RAKVVCLGI YGMGTPQVAKKLEITESQAQGLVRSFL+AFPGIEPFMAATRR ARE GYVCTLTGRRRHLPEINNSRNA  KAQAERQAVNSVVQGTAADI+KTAMVLVARRLDAWRS L+EGLDCPRLIMQIHDELVLECPACEEDLE+LKGLLA+CMEVEAPA+LGI+CPLTVNMLVGMSWGSMRRVVSHDE
Sbjct:    1 MAADYSQIEMRVLADACRDPGLRNLFATLGGTNDA-GAGTGG---GDVYRKLAAQVFGKEEQSVSDEERNRAKVVCLGITYGMGTPQVAKKLEITESQAQGLVRSFLKAFPGIEPFMAATRRFARENGYVCTLTGRRRHLPEINNSRNAAAKAQAERQAVNSVVQGTAADIMKTAMVLVARRLDAWRSRLDEGLDCPRLIMQIHDELVLECPACEEDLEKLKGLLADCMEVEAPAVLGIKCPLTVNMLVGMSWGSMRRVVSHDE 260          
BLAST of mRNA_P-littoralis_Contig17.149.3 vs. uniprot
Match: A0A7S4JPM5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JPM5_9STRA)

HSP 1 Score: 298 bits (763), Expect = 2.590e-80
Identity = 261/857 (30.46%), Postives = 386/857 (45.04%), Query Frame = 0
Query:  460 ADFAGADDVCF-NPGASLEGLSIFLERCEASGAVLLSMLW--ADLTTNYSAVTIKSC-QPSQSCFRWNCSCGRQPRARQATAPIIGAIVYLPATGERASQAALAGEEAWICSFRAVGGCSQVEDFPEGETYLLPLGACVGEDQEAAEAGGYQ-------LPLQCEASYDERWGALAKI-VAMPIKKVAFNAQVALMPLIAWRRRRESRDFVARSSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGCGATTSDGSHQQATTEYDLSTVAGLFDPRVAAWMSDTGSTGKALEFEALCVSWLKDEAANGESASVRSGGNGRSSAIVAAVTHAEGCSRRSLALA----GKISAELDRAKMLAACEQVEMPAIPVLAGMEVSGVVFLPERVTRFSEALGRHLEGLERTAVEAVGGRDFNLASPDQVADILFKHLKLPAPP-----VKAGSVHASTSADVLARLQ-------GKHAVVAPVLEFRGVHKYKTTYVDKLAERALGAAAADSAVPASQIAGVG--------------AVRIHAAWNQTSARTGRLSCSRPNLQQIPKSSDPLTGVEGVNVRDAFA-ASKSFTLMAADYSQIEMRVLADACRDPGLRGLFASAGDGNTSNGANSGNKGRGDVYRKLAAQVFGKEESGITDAERTRAKVVCLGIIYGMGTPQVAKKLEITESQAQGLVRSFLRAFPGIEPFMAATRRCARETGYVCTLTGRRRHLPEINNSRNATMKAQAERQAVNSVVQGTAADIVKTAMVLVARRLDAWRSSLEEGLDCP-------RLIMQIHDELVLECPACEEDLERLKGLLAECMEVEAPAMLGIQCPLTVNMLVGMSWGSMRRV 1266
            A F G ++  F N G S E L +FL + ++   V  +M++   D TT +   + K C Q    C  WNC C  Q RA QA+AP++GA++ +P   E    A                           ETY+LPLG  +  D       G++        P  C  S  +RW A   I +   + KV + A++ LMP    R +                                                    +D SH Q     DL  + G++D R+A+W+    S    LEFE +          NG    V           V+   H    +R  L L       I  ++    + AA + +E P   VL+ ME +G+   P R+ +  +A+ + +E L   A        F L+SP QV+ +LF  + +  P        AGS H STS + L  +Q         + ++  +LEFR ++K  TTY+  L   A   A      P S+  G                ++RIH  W QT+ RTGRLSC +PN+QQIP  S     V GVN RD+F  +S+   L+ ADYSQ E+R+LA    D  L  +F S              K   D+Y+ +A+   GK    ++  ER+  K V L ++YGMG  QVAKKL +  S AQ  + SF R F G+  ++ AT+  AR   +V T++GRRR+L +I +S N   +AQAERQAVN+++QG+AADI+K AM+ ++ R+  W+   +E LD P        +++QIHDEL+ E  A E D++ L+  +  C   E      ++  L +  + GMSWGSM  +
Sbjct:  386 ASFEGIEECEFMNAGTSDESLELFLSKVKSKRVVAWTMVFLDGDCTTPFLPTSKKYCTQKGPRCTMWNCICDGQIRAMQASAPVLGAMISVPLPSEGEPNA-------------------------NAETYILPLGPALNLDSVPGLTTGFERMTSWPVAPFLCGTSLRQRWNAFRSILIDRHVTKVTYCAELGLMPFHFHRMQDVE----------------------------------------------GGRADASHAQL----DL-ILPGIWDLRLASWVLLPHSKDSDLEFETM---------RNGFPHLVDKIPKHPKPDNVSTQLHGLISAREDLELLLVLHPIIGRQISDKGLRAAFDDIESPLQSVLSAMECTGIGVRPSRLPK--QAVEQKIEKLTTEAQSVSKDNTFLLSSPQQVSHLLFDIMGITVPKGLSTKQVAGSQHRSTSEESLKAIQTEAKKKGNNYRIIDIILEFRTLNKMLTTYIRPLPNFARELA------PKSKSRGKRRKRSKQQSKDDKSKSLRIHPMWMQTAVRTGRLSCRKPNMQQIPTDS-----VLGVNPRDSFTVSSRKKCLVTADYSQKEIRILAHMSNDDTLINMFRS--------------KDEVDIYKAMASACCGKPVHSVSGEERSIYKQVTLAVLYGMGVTQVAKKLNVNRSTAQKFLNSFFRRFQGVRRWIEATKEFARRHQFVTTISGRRRYLDDICSSDNGK-RAQAERQAVNTIIQGSAADIMKLAMLKMSSRIMDWK---KECLDSPGGSVVPPMILLQIHDELLFETNANEIDVKMLRDAIMRCCAEECVREFNLKVQLKLKCMYGMSWGSMEEL 1126          
BLAST of mRNA_P-littoralis_Contig17.149.3 vs. uniprot
Match: A0A6V2EN94_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2EN94_9STRA)

HSP 1 Score: 297 bits (761), Expect = 4.620e-80
Identity = 250/837 (29.87%), Postives = 383/837 (45.76%), Query Frame = 0
Query:  462 FAGADDVCFNPGASL-EGLSIFLERCEASGAVLLSMLWADLTTNYSAVTIKSCQP-----SQSCFRWNCSCGRQPRARQATAPIIGAIVYLPATGERASQAALAGEEAWICSFRAVGGCSQVEDFPEG-ETYLLPLG-ACVGEDQEAAEAGGYQL------PLQCEASYDERWGALAKIVAMP-IKKVAFNAQVALMPLIAWRRRRESRDFVARSSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGCGATTSDGSHQQATTEYDLSTVAGLFDPRVAAWMSDTGSTGKALEFEALCVSWLKDEAANGESASVRSGGNGRSSAIVAAVTHAEGCSRRSLALAGKISAELDRAKMLAACEQVEMPAIPVLAGMEVSGVVFLPERVTRFSEALGRHLEGLERTAVEAVGGRDFNLASPDQVADILFKHLKLPAPP-----VKAGSVHASTSADVLARLQGK--------HAVVAPVLEFRGVHKYKTTYVDKLAERALGAAAADSAVPASQIAGVGAVRIHAAWNQTSARTGRLSCSRPNLQQIPKSSDPLTGVEGVNVRDAFAASKSFT-LMAADYSQIEMRVLADACRDPGLRGLFASAGDGNTSNGANSGNKGRGDVYRKLAAQVFGKEESGITDAERTRAKVVCLGIIYGMGTPQVAKKLEITESQAQGLVRSFLRAFPGIEPFMAATRRCARETGYVCTLTGRRRHLPEINNSRNATMKAQAERQAVNSVVQGTAADIVKTAMVLVARRLDAWRSSLEE--GLD-CPRLIMQIHDELVLECPACEEDLERLKGLLAECMEVEAPAMLGIQCPLTVNMLVGMSWGSMRRV 1266
            F G +D   +  AS  E L  FLE  +A   V  ++++ D   + S   + SC+         C  WNC+C  Q RA +A+AP++GA+   P   +         +E  I S       SQ+ +  +    ++LPLG   + E     +   +++      P  C+ S  +RW     I+    +  V FNA V LMP    R                                                         + ++   +  L +V   +D R+A+W+    +  + LE +A C  +   +  +  S +V    +     ++ A    E   R    L   +  ++    + +A  ++E P   +L+ ME  GV F+P+R     + L + ++ L   A       +F L+SP QV+ +LF  L L  P        +GS H STS + L  +Q +        H ++  +LEFR ++K  TTY+  L   A             +     A+RIH  W QT+ RTGRLSC +PN+QQ+P       G  GVN RD F A+ S   L A DYSQ E+R+LA    D  L  +F   G                D+Y+++++ + G     ++D ER   K V L I+YGMG PQVAKKL +T S AQ    SF R F G+  +M  T+  AR+  +V T+ GRRR+L +IN++  A  KAQAERQAVN+++QG+AAD++K AM+  A RL  W   + E  G +  PRL++QIHDEL+ E  A E D+ +LK ++ +C   E      ++ PL++    G+SWG M  V
Sbjct:  385 FDGIEDCNIHNAASKDESLRCFLEMVKAQRYVAWTIIFLD--QDCSTAFLPSCEKYCTEKGPHCRMWNCTCDGQVRATRASAPVLGAMFVFPHGMQ---------DEHEIDSVDNPNTNSQILNIGDNLACFILPLGPTMMSEGTPELDRDFHRMARWPVIPFHCDTSISQRWDTFRSILLQKHVTLVTFNAVVGLMPFHFHR--------------------------------------------------------SNDKEGMMDLILPSV---WDLRLASWILIPHAKAEQLELKAKCEGFPHLQTKS-SSYTVPPNASNPLKGLLKARNQLEFLFR----LYPIVDKQMRDKGLNSAFLEIESPVQSILSAMECIGVGFVPKRFLGIQKQLEKKIDELVAEARSIAKDNNFLLSSPQQVSHLLFDVLNLAIPQGLQAKTVSGSQHRSTSEEALKAIQAEAKSKSNTGHRIIDILLEFRSLNKLLTTYIRPLPNFARKGEYRKKKSKKYKTDVTMAMRIHPMWMQTAVRTGRLSCRKPNMQQVPN-----VGAFGVNPRDGFVATSSEKCLFACDYSQNEIRILAHMSGDQTLISMFREDGV---------------DIYKQMSSAITGMPVDEVSDKERKIYKQVTLAILYGMGVPQVAKKLSVTRSTAQNFFTSFYRRFHGVRQWMEQTKDFARQNCFVTTIAGRRRYLDDINSTDTAK-KAQAERQAVNTIIQGSAADLIKLAMLKTASRLMDWHKEVIEAGGTNIAPRLLLQIHDELLFEVMANETDVSKLKDIVTQCCGEECVEEFKLKVPLSLKCTCGISWGLMNEV 1125          
BLAST of mRNA_P-littoralis_Contig17.149.3 vs. uniprot
Match: A0A7R9VQU8_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VQU8_9STRA)

HSP 1 Score: 277 bits (709), Expect = 2.160e-78
Identity = 179/479 (37.37%), Postives = 261/479 (54.49%), Query Frame = 0
Query:  808 ACEQVEMPAIPVLAGMEVSGVVFLPERVTRFSEALGRHLEGLERTAVEAVGGRDFNLASPDQVADILFKHLKLPAPPVKA-----GSVHASTSADVLARLQGKHA-------VVAPVLEFRGVHKYKTTYVDKLAERALGAAAADSAVPA-------SQIAGVGAVRIHAAWNQTSARTGRLSCSRPNLQQIPKSSDPLTGVEGVNVRDAFAASKSFTLMAADYSQIEMRVLADACRDPGLRGLFASAGDGNTSNGANSGNKGRGDVYRKLAAQVFGKEESGITDAERTRAKVVCLGIIYGMGTPQVAKKLEITESQAQGLVRSFLRAFPGIEPFMAATRRCARETGYVCTLTGRRRHLPEINNSRNATMKAQAERQAVNSVVQGTAADIVKTAMVLVARRLDAWRSSLEEGLD----CPRLIMQIHDELVLECPACEEDLERLKGLLAECMEVEAPAMLGIQCPLTVNMLVGMSWGSM 1263
            A + +E P   VL+ ME +G+ F P R+    + L R ++ L   A        F L+SP QV+  LF  +++P P   +     GS H STS + L  ++ +         +V  +LEFR ++K  TTY+  L   A   +   S           S     G VRIH  W QT+ RTGRLSC +PN+QQIP       GV GVN RDAF AS    L+ ADY Q E+R+LA    D  L  +F S              K   D+Y+++A+    K    ++D ER   K V L ++YGMG PQVAKKL ++ S AQ  + +F R F G+  ++ AT+  AR   +V T++GRRR+L +I +  +   +AQAERQAVN+++QG+AADI+K AM+ ++ R+  W+ +  EGLD     PR+++QIHDEL+ E  A E D++RL+  +  C   E      ++  LT+ + +G+SWGSM
Sbjct:   27 AFDDIESPLQSVLSSMECTGIDFRPSRLLGIQQQLERKIQALTDEARSITKDSTFLLSSPQQVSHYLFDIMRIPLPKGLSTKQVGGSQHRSTSEEALKAIRAEAKKKGNPLHIVDIILEFRTLNKMLTTYIRPLPNFARDMSTGKSRSXXXXXXXRQSNDEKSGFVRIHPMWMQTAVRTGRLSCRKPNMQQIPTD-----GVLGVNPRDAFTASPHKCLVTADYCQKEIRILAHMANDDTLLNMFRS--------------KEEVDIYKQMASACCNKPVEKVSDEERRIYKQVTLAVLYGMGVPQVAKKLSVSRSTAQNFLNTFFRRFQGVSRWIEATKDFARRHQFVTTISGRRRYLDDICSG-DKGKRAQAERQAVNTIIQGSAADIMKLAMLKMSARIMDWKKA--EGLDSLGSAPRILLQIHDELLFETDANESDVKRLRDAIMRCCADECVREFDLKVQLTMTLRIGISWGSM 483          
BLAST of mRNA_P-littoralis_Contig17.149.3 vs. uniprot
Match: A0A7S3V8E1_9STRA (DNA-directed DNA polymerase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V8E1_9STRA)

HSP 1 Score: 290 bits (743), Expect = 6.730e-77
Identity = 255/860 (29.65%), Postives = 385/860 (44.77%), Query Frame = 0
Query:  471 NPGASLEGLSIFLERCEASGA----VLLSMLWADLT--TNYSAVTIKSCQPS-QSCFRWNCSCGRQPRARQATAPIIGAIVYLPATGERASQAALAGEEAWICSFRAVGGCSQVEDFPEGETYLLPLGACVGEDQEAAEA-----GGYQ-------LPLQCEASYDERWGALAKI-VAMPIKKVAFNAQVALMPLIAWRRRRESRDFVARSSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGCGATTSDGSHQQATTEYDLSTVAGLFDPRVAAWMSDTGSTGKALEFE----ALCVSWLKDEAANGESASVRSGGNGRSSAIVAAVTHAEGCSRRSLALAGKISAELDRAKMLAACEQVEMPAIPVLAGMEVSGVVFLPERVTRFSEALGRHLEGLERTAVEAVGGRDFNLASPDQVADILFKHLKLPAP------------PVKAGSVHASTSADVLARLQGKHA--------VVAPVLEFRGVHKYKTTYVDKLAERALG---------AAAADSAVPASQIAGVGAVR-------IHAAWNQTSARTGRLSCSRPNLQQIPKSSDPLTGVEGVNVRDAFAAS-KSFTLMAADYSQIEMRVLADACRDPGLRGLFASAGDGNTSNGANSGNKGRGDVYRKLAAQVFGKEESGITDAERTRAKVVCLGIIYGMGTPQVAKKLEITESQAQGLVRSFLRAFPGIEPFMAATRRCARETGYVCTLTGRRRHLPEINNSRNATMKAQAERQAVNSVVQGTAADIVKTAMVLVARRLDAWRSSLE---EGLDCPRLIMQIHDELVLECPACEEDLERLKGLLAECMEVEAPAMLGIQCPLTVNMLVGMSWGSMRRV 1266
            N G+S E L+ FL+  + S      +  +M++ D T  T +   T K C P    C  WNC+C  Q RA QA+ P++GA+   P     +SQ +   E     S  +   C           +LLPL  C   D E          GY+       LP+ C+ S   RW     I +   + KV FNAQV LMP         + D  A  ++                                      + S   +Q   + Y    +  ++D R+A+W+    +  + LE E         + K +     +A+    G      ++ A    E       AL   +   L+   +  +  ++E P   VL+ ME  G+ F P+++ R  + L   ++ L + A E     DF L+SP QVA  LF  + L AP            P  +   H STS + L  +Q ++         +V  +L FRG++K  +TY+    + A            A    +   S+I+     R       IH  W QT+ RTGRLSC +PNLQQ+P  S     V GV  R AF  S K   L A DYSQ E+R+LA    D  L  LF   G                DVY+++++ + GK  + +TD ER+ AK + L I+YGMG   VAK+L + +  A+   RSF   FP ++ +M  T   AR   YV T++GRRR+L  I N   A +++QAERQA+N+++QG+AAD++K AM+ +A R+  WR       E    PR+++QIHDEL+ E  A + D++RL+ ++  C   E      ++ PL +   +G SWGSM+ +
Sbjct:  595 NAGSSTEALAAFLQMIKQSKQQKTYITWTMIFHDSTCSTPFLPCTKKYCTPKGPPCTMWNCTCDNQIRAMQASKPVVGAMFVFP-MNVNSSQESQESESLDTDSAHSSLDC-----------FLLPL--CPTVDPEVGTGPKDIDAGYERMAHFPFLPILCDTSLQARWDTFRSILIDRHVIKVTFNAQVGLMPY----HYHCANDIAATPTSTGSDKHENE-----------------------------SNSTNRNQNHYSGYLDMVLPNIWDLRLASWILSPHAEEETLEMENKKAGFSHLYPKPKCPIPPNATPHLTG------LIEAKEQLEFL----YALYPIVDGLLESNGLKHSFCEIESPVQSVLSAMECFGIGFKPDQLIRIQKQLEDTIDNLNQEARELTKDCDFMLSSPQQVASFLFDKMGLNAPERTRATATAKARPGNSKGQHRSTSEESLKAIQNEYKKKNGESLRIVELILTFRGLNKVLSTYIRPYPKLARDDNSNLIHSRKATKTRSKKKSKISNSSTTRTTAKIKKIHPMWMQTAVRTGRLSCRKPNLQQVPTGS-----VLGVCPRSAFTTSAKDSCLFACDYSQKEVRILAHMSGDANLMNLFTQPGTD--------------DVYKQMSSVISGKRSNEVTDKERSIAKQLTLAIMYGMGINSVAKQLGVNKESAKSFFRSFYGRFPDVKRWMDQTISSARTNKYVTTISGRRRYLDNITNEDRA-LRSQAERQAINTIIQGSAADLMKLAMLKMASRITDWRKERTGNGESNTPPRMLLQIHDELLFEIVANQADVDRLRSVVTRCCTEECVEEFRLKVPLKLKCSIGTSWGSMKEL 1377          
BLAST of mRNA_P-littoralis_Contig17.149.3 vs. uniprot
Match: A0A7S2LIW8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LIW8_9STRA)

HSP 1 Score: 269 bits (687), Expect = 2.090e-74
Identity = 182/487 (37.37%), Postives = 257/487 (52.77%), Query Frame = 0
Query:  790 LALAGKISAELDRAKMLAACEQVEMPAIPVLAGMEVSGVVFLPERVTRFSEALGRHLEGLERTAVEAVGGRDFNLASPDQVADILFKHLKLPAPP------VKAGSVHASTSADVLARLQGK--HAVVAPVLEFRGVHKYKTTYVDKLAERALGAAAADSAVPASQIAGVGAVRIHAAWNQTSARTGRLSCSRPNLQQIPKSSDPLTGVEGVNVRDAFAASK-SFTLMAADYSQIEMRVLADACRDPGLRGLFASAGDGNTSNGANSGNKGRGDVYRKLAAQVFGKEESGITDAERTRAKVVCLGIIYGMGTPQVAKKLEITESQAQGLVRSFLRAFPGIEPFMAATRRCARETGYVCTLTGRRRHLPEINNSRNATMKAQAERQAVNSVVQGTAADIVKTAMVLVARRLDAWRSSLEEGLDC------PRLIMQIHDELVLECPACEEDLERLKGLLAECMEVEAPAMLGIQCPLTVNMLVGMSWG 1261
            LA+   IS  + +  +  + +Q+E P   VL+ ME  GV FLP       + L   +E L   A    G   F  +SP QVA +L+  LKLP P           S H STS  +L  ++    H ++  +LEFR ++K  T+Y+  L   A      ++++ +  I     VRIH  W QT+ RTGRLSC +PN+QQIPK S        V  RDAF A+     L + DYSQ E+R+LA    D  L  LF               NK   D+Y+++++ V GK    +T  ER   K V L I+YGMG  QV+KKL I  S+AQ    SF   F     ++  T+  A++ G+V T+ GRRR+L EI  S ++  +AQAERQAVNSV+QG+AAD++K AM+ +  R+  W    +EG         PR+++QIHDEL+ E    ++D++RLK  +  C   E    L ++ PL VN  VG SWG
Sbjct:  112 LAMYPIISRSITKKGLADSLDQIEGPLQSVLSAMECIGVGFLPHTYQNIEQRLDNRIEELSLEARNIAGNNSFLCSSPQQVAQLLYDVLKLPVPKDTMPRTATTSSQHRSTSEAILEAIKSSTPHRIIDILLEFRSLNKLLTSYIKPLPFLARKPYLREASLSSKPI-----VRIHPMWMQTAVRTGRLSCRKPNMQQIPKDS-----TFDVAPRDAFCATAHDMCLFSFDYSQNEVRILAHMSEDQQLISLFL--------------NKDGLDIYKQMSSLVTGKTVDSVTIEERAITKQVVLAILYGMGISQVSKKLGINRSKAQHFFNSFFARFKQTRRWIDMTKESAKKLGFVTTIVGRRRYLDEIR-SNDSAKRAQAERQAVNSVIQGSAADLMKLAMLKIGSRITDWH---KEGHSAGGTGRHPRMLLQIHDELLFEIANNKDDIQRLKDAIICCCAEECELDLKLKVPLKVNCSVGSSWG 570          
BLAST of mRNA_P-littoralis_Contig17.149.3 vs. uniprot
Match: B8C4R5_THAPS (DNA polymerase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4R5_THAPS)

HSP 1 Score: 262 bits (669), Expect = 8.210e-73
Identity = 169/473 (35.73%), Postives = 246/473 (52.01%), Query Frame = 0
Query:  805 MLAACEQVEMPAIPVLAGMEVSGVVFLPERVTRFSEALGRHLEGLERTAVEAVGGRDFNLASPDQVADILFKHLKLPAPP--VKAGSVHASTSADVLARLQGK-----HAVVAPVLEFRGVHKYKTTYVDKLAERALGAAAADSAVPASQIAGVGAVRIHAAWNQTSARTGRLSCSRPNLQQIPKSSDPLTGVEGVNVRDAFAASKSFT--LMAADYSQIEMRVLADACRDPGLRGLFASAGDGNTSNGANSGNKGRGDVYRKLAAQVFGKEESGITDAERTRAKVVCLGIIYGMGTPQVAKKLEITESQAQGLVRSFLRAFPGIEPFMAATRRCARETGYVCTLTGRRRHLPEINNSRNATMKAQAERQAVNSVVQGTAADIVKTAMVLVARRLDAWR--SSLEEGLDCPRLIMQIHDELVLECPACEEDLERLKGLLAECMEVEAPAMLGIQCPLTVNMLVGMSWGSMRRV 1266
            +L + E +E P   +LA ME  GV F P  + R        +E LE  A        F L+SP Q+++ L+  LK+  P   V+      STS + L  L+       H ++  +LEFR ++K  TTY+  L    L                    RIH  W++ + RTGRLSC +PNLQQ+PK        +G +VR +F  SK  T  L A DYSQ E+R+LA    D  L  LF    D N             D+Y+++++ +  K    IT  ER + K V L ++YGM   QVAKKL IT+SQA  ++  F R F G++ +M  T+  AR   YV T+ GRRR+L  I++  N   KAQAERQA+N+V+QG+AAD++K +M+ +A  L  W+  +S       PR+++QIHDELVLE    E D+ RL+ +  + +  +      ++ PL +    GMSW  M+ +
Sbjct:   68 LLPSLENIEAPVQSILAAMECRGVAFYPNHLKRNEAQANERIEALEAQARTITNDSSFLLSSPQQISNYLYDILKMKVPSGLVQKTKSQRSTSEETLQALKAASNGSPHPIIDVILEFRTLNKLLTTYIKPLPTFCLPQ------------------RIHPQWSECAVRTGRLSCRQPNLQQVPKD-------DGASVRRSFVPSKKETMCLFACDYSQKEVRILAHMSGDKALISLFQM--DANV------------DIYKQMSSLIRNKPVESITAQERAQFKQVTLALLYGMSPNQVAKKLNITKSQAIQMMNDFFRRFQGVKNWMEDTKEFARRNHYVVTIAGRRRYLDGIDSDDNGA-KAQAERQAINTVIQGSAADLMKCSMINIAENLQRWQEDNSSNGTSSRPRILLQIHDELVLELNFVETDIRRLQAIATKSLTRDCEEYFHLKVPLLLTCSCGMSWHGMKAI 500          
BLAST of mRNA_P-littoralis_Contig17.149.3 vs. uniprot
Match: A0A3A0G8D4_9BACT (DNA polymerase I (Fragment) n=1 Tax=bacterium TaxID=1869227 RepID=A0A3A0G8D4_9BACT)

HSP 1 Score: 263 bits (673), Expect = 6.650e-72
Identity = 174/471 (36.94%), Postives = 256/471 (54.35%), Query Frame = 0
Query:  799 ELDRAKMLAACEQVEMPAIPVLAGMEVSGVVFLPERVTRFSEALGRHLEGLERTAVEAVGGRDFNLASPDQVADILFKHLKLPAPPVKAGSV-HASTSADVLARLQGKHAVVAPVLEFRGVHKYKTTYVDKLAERALGAAAADSAVPASQIAGVGAVRIHAAWNQTSARTGRLSCSRPNLQQIPKSSDPLTGVEGVNVRDAFAASKSFTLMAADYSQIEMRVLADACRDPGLRGLFASAGDGNTSNGANSGNKGRGDVYRKLAAQVFGKEESGITDAERTRAKVVCLGIIYGMGTPQVAKKLEITESQAQGLVRSFLRAFPGIEPFMAATRRCARETGYVCTLTGRRRHLP----EINNSRNATMKAQAERQAVNSVVQGTAADIVKTAMVLVARRLDAWRSSLEEGLDCPRLIMQIHDELVLECPACEEDLERLKGLLAECMEVEAPAMLGIQCPLTVNMLVGMSWGSMR 1264
            ELDR  +    +++++P +PVL  ME++GV+   + + R SE L   L  +E   V A+ G  FNL SP Q+  +LF  LKL AP  +  +   AS +ADVL  L+G H ++  +LE R + K K TY+D L                 ++      R+H  +NQT A +GRL+   PNLQ IP  ++      G  VR AF A   + L++ADYSQ+E+R+ A  C+DPGLR  FA+  D                ++R  AA V G     +T  +R  AKVV  GI+YGMG   +A++   T  +AQ  +  +   FP I+ ++  T+R ARE GYV TL GRRR+ P    +  ++R   M+A AER+A+N  +QG+AADI+K AM+ +   L       E GL   RL++Q+HDELVLE P  ++++E +  L+   ME   P    +  PL V++ VG SW  ++
Sbjct:  218 ELDRVGLRRLLDEIDLPLVPVLLDMELAGVLVDTDLLARLSERLAVRLAEIE-AEVYALVGAPFNLNSPQQLGAVLFDQLKLKAPGGRQTATGQASVAADVLETLRGSHPIIDLILEQRQLTKLKGTYLDAL----------------PKLVNPRTGRVHTNFNQTGAVSGRLASQDPNLQNIPIRTEL-----GREVRRAFVAPPGWKLVSADYSQVELRIAAHICQDPGLRAAFAAGAD----------------IHRATAATVLGIPPEAVTADQRRFAKVVNFGILYGMGAQALAQQTGSTTKEAQAFIEVYFAGFPNIKRYIEDTKRQAREQGYVETLLGRRRYFPVLGVQTRDNRTRLMQASAEREAINHPMQGSAADIIKVAMIRIHATL------AERGLRA-RLLLQVHDELVLEAP--DDEVEAVVALVRNLMEGAYP----LDPPLKVDIGVGSSWDEVK 637          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig17.149.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK42_ECTSI0.000e+065.92DNA-directed DNA polymerase n=1 Tax=Ectocarpus sil... [more]
A0A6H5J5W8_9PHAE6.320e-21650.00POLAc domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JBL3_9PHAE1.730e-14587.50DNA-directed DNA polymerase n=1 Tax=Ectocarpus sp.... [more]
A0A7S4JPM5_9STRA2.590e-8030.46Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A6V2EN94_9STRA4.620e-8029.87Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7R9VQU8_9STRA2.160e-7837.37Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S3V8E1_9STRA6.730e-7729.65DNA-directed DNA polymerase n=1 Tax=Chaetoceros de... [more]
A0A7S2LIW8_9STRA2.090e-7437.37Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
B8C4R5_THAPS8.210e-7335.73DNA polymerase (Fragment) n=1 Tax=Thalassiosira ps... [more]
A0A3A0G8D4_9BACT6.650e-7236.94DNA polymerase I (Fragment) n=1 Tax=bacterium TaxI... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002298DNA polymerase APRINTSPR00868DNAPOLIcoord: 984..999
score: 32.69
coord: 956..978
score: 55.52
coord: 1168..1184
score: 60.86
coord: 1006..1029
score: 55.29
IPR002298DNA polymerase APANTHERPTHR10133DNA POLYMERASE Icoord: 620..1266
IPR001098DNA-directed DNA polymerase, family A, palm domainSMARTSM00482polaultra3coord: 992..1222
e-value: 1.4E-71
score: 253.8
IPR001098DNA-directed DNA polymerase, family A, palm domainPFAMPF00476DNA_pol_Acoord: 834..1261
e-value: 9.5E-105
score: 350.7
NoneNo IPR availableGENE3D1.20.1060.10Taq DNA Polymerase; Chain T, domain 4coord: 826..934
e-value: 1.5E-21
score: 78.8
NoneNo IPR availableGENE3D1.10.150.20coord: 1015..1175
e-value: 1.1E-82
score: 279.2
NoneNo IPR availableGENE3D3.30.70.370coord: 966..1260
e-value: 1.1E-82
score: 279.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..452
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 413..431
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 294..337
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 245..276
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availablePANTHERPTHR10133:SF27DNA POLYMERASE THETAcoord: 620..1266
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 708..824
e-value: 9.2E-8
score: 34.1
IPR019760DNA-directed DNA polymerase, family A, conserved sitePROSITEPS00447DNA_POLYMERASE_Acoord: 1076..1095
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 805..1263

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig17contigP-littoralis_Contig17:665012..677410 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig17.149.3mRNA_P-littoralis_Contig17.149.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig17 664371..685287 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig17.149.3 ID=prot_P-littoralis_Contig17.149.3|Name=mRNA_P-littoralis_Contig17.149.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1284bp
MNNDGQRAVEWNLVPPESPPSGPALHNQAKNKPFALLKSLEAPRGPEYFA
MEKFRRPLRSGGGGGGGRRRYDDGVGVDCGTRGFDNNNDDDDNRNENQQL
SSFARGSVLHTPAASPREAGWGMTSFSPVLSQASSTMMTPLQQTQQQQQG
SGGGFSMFGGKAHSTPVDCISSSGGTRRPPPLSSHTPIGNSAPAASHAET
SRGSGGRTIGGGLSRFKTLSQKTLEEEREEDEDESRRWGSDSGGSGPGEY
TNRSAAPGVLNTPSSSLLSPTTGIGSLSPELLPFGGGGGGVGRHSVTTPS
SLALSSLSSGGAPPTAATSRKRPRAPSTATTSPARPVMMSGALQLTPVVG
SGGGGDALVARTWGSMGDGDRGGGGQQRRHHQHQQRQQQNLKATPSPIVR
ARAAGAGAARGLSGSGSSRSPRPTRSKPPSQSPRGRGKVVGSGSPRLLQP
PPLTRRYELADFAGADDVCFNPGASLEGLSIFLERCEASGAVLLSMLWAD
LTTNYSAVTIKSCQPSQSCFRWNCSCGRQPRARQATAPIIGAIVYLPATG
ERASQAALAGEEAWICSFRAVGGCSQVEDFPEGETYLLPLGACVGEDQEA
AEAGGYQLPLQCEASYDERWGALAKIVAMPIKKVAFNAQVALMPLIAWRR
RRESRDFVARSSAAAAAAAATAAAAAAAAAAAAAAAAVAEGSGEGESGCG
ATTSDGSHQQATTEYDLSTVAGLFDPRVAAWMSDTGSTGKALEFEALCVS
WLKDEAANGESASVRSGGNGRSSAIVAAVTHAEGCSRRSLALAGKISAEL
DRAKMLAACEQVEMPAIPVLAGMEVSGVVFLPERVTRFSEALGRHLEGLE
RTAVEAVGGRDFNLASPDQVADILFKHLKLPAPPVKAGSVHASTSADVLA
RLQGKHAVVAPVLEFRGVHKYKTTYVDKLAERALGAAAADSAVPASQIAG
VGAVRIHAAWNQTSARTGRLSCSRPNLQQIPKSSDPLTGVEGVNVRDAFA
ASKSFTLMAADYSQIEMRVLADACRDPGLRGLFASAGDGNTSNGANSGNK
GRGDVYRKLAAQVFGKEESGITDAERTRAKVVCLGIIYGMGTPQVAKKLE
ITESQAQGLVRSFLRAFPGIEPFMAATRRCARETGYVCTLTGRRRHLPEI
NNSRNATMKAQAERQAVNSVVQGTAADIVKTAMVLVARRLDAWRSSLEEG
LDCPRLIMQIHDELVLECPACEEDLERLKGLLAECMEVEAPAMLGIQCPL
TVNMLVGMSWGSMRRVVSHDEDEDNDDDDDDSE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002298DNA_polymerase_A
IPR001098DNA-dir_DNA_pol_A_palm_dom
IPR036397RNaseH_sf
IPR019760DNA-dir_DNA_pol_A_CS
IPR043502DNA/RNA_pol_sf