mRNA_P-littoralis_Contig17.149.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig17.149.3 vs. uniprot
Match: D7FK42_ECTSI (DNA-directed DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK42_ECTSI) HSP 1 Score: 1336 bits (3457), Expect = 0.000e+0 Identity = 855/1297 (65.92%), Postives = 946/1297 (72.94%), Query Frame = 2
Query: 143 MNNDGQRAVEWNLVPPESPPSGPALHNQAKNKPFALLKSLEAPRGPEYFAMEKFRRPLRSGXXXXXXXXXYDDGVGVDCGTRGFDNNXXXXXXXNENQQLSSFARGSV-------LHTPAASPREAGWGMTSFSPVLSQASSTMMTPLQQXXXXXXXXXXXFSMFGGKAHSTPVDCISSSGGTRRPPPLSSHTPIGNSAPAASHAETSRGSGGRT-IGGGLSRFKTLSQKTLEEEREEDEDESRRWGSDSGGSGPGEYTNRSAAPGVLNTPSSSLLSPTTGIGSLSPELLPFGGXXXXVGRHSVTTPSSLALSSLSSGGAPPTAATSRKRPRAPSXXXXSPARPVMMSGALQLTP--VVGSGGGG---DALVARTWGSMGDGDRGXXXXXXXXXXXXXXXXXXLKATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPPSQSPRGRGKVVGSGSPRLLQPPPLTRRYELADFAGADDVCFNPGASLEGLSIFLERCEASGAVLLSMLWADLTTNYSAVTIKSCQPSQSCFRWNCSCGRQPRARQATAPIIGAIVYLPATGERASQAALAGEEAWICSFRAVGGCSQVEDFPEGETYLLPLGACVGEDQEAAEAGGYQLPLQCEASYDERWGALAKIVAMPIKKVAFNAQVALMPLIAWRRRRESRDFVARSSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGCGATTSDGSHQQATTEYDLSTVAGLFDPRVAAWMSDTGSTGKALEFEALCVSWLKDEAANGESASVRSGGNGRSSAIVAAVTHAEGCSRRSLALAGKISAELDRAKMLAACEQVEMPAIPVLAGMEVSGVVFLPERVTRFSEALGRHLEGLERTAVEAVGGRDFNLASPDQVADILFKHLKLPAPPVKAGSVHASTSADVLARLQGKHAVVAPVLEFRGVHKYKTTYVDKLAERALGAAAADSAVPASQIAGVGAVRIHAAWNQTSARTGRLSCSRPNLQQIPKSSDPLTGVEGVNVRDAFAASKSFTLMAADYSQIEMRVLADACRDPGLRGLFASAGDGNTSNGANSGNKGRGDVYRKLAAQVFGKEESGITDAERTRAKVVCLGIIYGMGTPQVAKKLEITESQAQGLVRSFLRAFPGIEPFMAATRR----C---------ARETGYVCTLTGRRRHLPEINNSRNATMKAQAERQAVNSVVQGTAADIVKTAMVLVARRLDAWRSSLEEGLDCPRLIMQIHDELVLECPACEEDLERLKGLLAECMEVEAPAMLGIQCPLTVNMLVGMSWGSMRRVVSHDE 3955
M+++ + WNLVPP PPSGPALH QAKN+PFALLKSLE PRGP+YF ME FRRPL DD VG G XXXXXX ++ +S A LHTP + PR G GM SFSP LS+AS+TMMTP+QQ FSMFGGKA+STP S G PPLSSHTPIG++ P + G GG + +GGGL+RFKTL Q+T G GGS G S A G + +PSS+ LSP++ +GS L P ++ T S P A RKRPRAPS + RP +TP V+ GGG D ARTWGS+ +G RG XXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXX +SPR S SPR QPPP RRY+L DFAGADDVCFN AS EGL+IFLERCEASG LS+LWADLTT++SA+T+KSC PSQSCFRWNC+CGRQPRA+QATAP+IGA+VYLP ER + A AG E+ GCSQ +DF EGE YLLPL ACVGED+EAA+A GY LPL CE SYDERW A AK+VA+P+KKVA LMPLIAWRRR ESR F+ARS+A XXXXXXXXXXXXXXXXXXXXXXXXXXX +T++ TV+GLFD RVAAWM+DTG KALEFEALCVSWLK E ++ E + SG GR AIVAAV AEGC RR+LALAGKISAEL+ AKMLAACEQVEMPAIPVLAGMEVSGVVFLPERVTRFS+ALG HLEGL+RTAV+AVGGRDFNLASPDQVAD+LFKHLKLP+PPVKAGSVHASTSA+VL LQGKHAVVAP+LEFRGV+KYKTTYVDKLAERALGAAAA+SAVPASQ G GA RIHA WNQTSARTGRLSCSRPNLQQ+PK SDPL GVEGVNVRDAF+A++SFTLMAADYSQIEMRVLADACRDPGLR LFA+ G N + GA++G GDVYRKLAAQVF KEE G++D ER RAKVVCLGI YGMGTPQVAKKLEITESQAQGLVRSFL+AFPGIEPFMAATRR C ARE GYVCTLTGRRRHLPEINNSRNA KAQAERQAVNSVVQGTAADI+KTAMVLVARRLDAWRSSL+EGLDCPRLIMQIHDELVLECPACEEDLERLKGLLA+CMEVEAPA+LGI+CPLTVNMLVGMSWGSMRRVVSHDE
Sbjct: 1 MHSNTRPEAVWNLVPPGRPPSGPALHTQAKNRPFALLKSLEPPRGPDYFPMENFRRPL----------WPDDDRVGASGIGAGXXXXXXXXXXTASDRHISQAANARTSQHSSPHLHTPTSGPRGTGRGMASFSPALSRASTTMMTPVQQTQQKPEG----FSMFGGKAYSTPA----SHGSICSQPPLSSHTPIGSNTPTVAPGTIPYGGGGSSGVGGGLARFKTLVQETQXXXXXXXXXXXXXXGR--GGSSSGCGIRDSTARG-MPSPSSNFLSPSSLMGSPPNALTPCDDSPSSSAAYAFTPSSXXXXXXXXXXXXGPLTAAGRKRPRAPSTATAALGRP--------MTPGTVLSVGGGNLSADVSGARTWGSLAEGSRGRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------RSPRPARNKSPSQSPRTSQPPPTPRRYKLDDFAGADDVCFNAAASSEGLAIFLERCEASGVASLSVLWADLTTSFSAMTVKSCLPSQSCFRWNCACGRQPRAQQATAPMIGAVVYLPGRAERIAWGASAGTES------DTSGCSQEDDFEEGEMYLLPLAACVGEDKEAAKAAGYHLPLDCETSYDERWAAFAKLVALPVKKVA------LMPLIAWRRRPESRTFLARSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------HLSTKHHT-TVSGLFDTRVAAWMTDTGKADKALEFEALCVSWLKGEGSDAEGVNAGSGDGGRLPAIVAAVARAEGCCRRNLALAGKISAELEGAKMLAACEQVEMPAIPVLAGMEVSGVVFLPERVTRFSDALGNHLEGLKRTAVKAVGGRDFNLASPDQVADVLFKHLKLPSPPVKAGSVHASTSAEVLEGLQGKHAVVAPILEFRGVNKYKTTYVDKLAERALGAAAAESAVPASQ--GAGAARIHATWNQTSARTGRLSCSRPNLQQMPKGSDPLAGVEGVNVRDAFSATRSFTLMAADYSQIEMRVLADACRDPGLRNLFATLGGTNDA-GASTGG---GDVYRKLAAQVFAKEEHGVSDEERNRAKVVCLGITYGMGTPQVAKKLEITESQAQGLVRSFLKAFPGIEPFMAATRRYGTPCRHQISQRRFARENGYVCTLTGRRRHLPEINNSRNAAAKAQAERQAVNSVVQGTAADIMKTAMVLVARRLDAWRSSLDEGLDCPRLIMQIHDELVLECPACEEDLERLKGLLADCMEVEAPAVLGIKCPLTVNMLVGMSWGSMRRVVSHDE 1213
BLAST of mRNA_P-littoralis_Contig17.149.3 vs. uniprot
Match: A0A6H5J5W8_9PHAE (POLAc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5W8_9PHAE) HSP 1 Score: 658 bits (1698), Expect = 4.840e-213 Identity = 516/1032 (50.00%), Postives = 589/1032 (57.07%), Query Frame = 2
Query: 293 MEKFRRPLRSGXXXXXXXXXYDDGVGVDCGTRGFDNNXXXXXXXNENQQLSSFARGS-----VLHTPAASPREAGWGMTSFSPVLSQASSTMMTPLQQXXXXXXXXXXXFSMFGGKAHSTPVDCISSSGGTRRPPPLSSHTPIGNSAPAASHAETSRGSGGRT-IGGGLSRFKTLSQKTLEEEREEDEDESRRWGSDSGGSGPGEYTN---RSAAPGVLNTPSSSLLSPTTGIGSLSPELLPFGGXXXXVGRHSVTTPSSLALSSLSSGGAPPTAATSRKRPRAPSXXXXSPARPVMMSGALQLTP-VVGSGGGG----DALVARTWGSMGDGDRGXXXXXXXXXXXXXXXXXXLKATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPPSQSPRGRGKVVGSGSPRLLQPPPLTRRYELADFAGADDVCFNPG----------------------------ASLEGLSIFLERCEASGAVLLSMLWADLTTNYSAVTIKSCQPSQSCFRWNCSCGRQPRARQATAPIIGAIVYLPATGERASQAALAGEEAWICSFRA-----VGGCSQVEDFPEGETYLLPLGACVGEDQEAAEAGGYQLPLQCEASYDERWGALAKIVAMPIKKVAFNAQVALMPLIAWRRRRESRDFVARSSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGCGATTSDGSHQQATTEYDLSTVAGLFDPRVAAWMSDTGSTGKALEFEALCVSWLKDEAANG------ESASVRSGGNGRSSAIVAAVTHAEGCSRRSLALAGKISAELDRAKMLAACEQVEMPAIPVLAGMEVSGVVFLPERVTRFSEALGRHLEGLERTAVEAVGGRDFNLASPDQ--------------------------------------------------VADILFKHLKLPAPPVKAGSVHASTSADVLARLQGKHAVVAPVLEFRGVHKYKTTYVDKLAERALGAAAADSAVPASQIAGVGAVRIHAAWNQTSARTGRLSCSRPNLQQ 3079
MEKFRRPL G+G G RG + +Q ++ AR S LHTP + PR G GM SFSP LS+ASSTMMTP+QQ FSMFGGKA+STP S G PPLSSHTPI ++ + GSGG + +GGGL+RFKTL+Q+T EE+ ++ ++ RR GGSG G + R + + +PSS+ L+P++ +GS L P ++ T PSS A S S+ P+ A RKRPRAPS + RP +TP V S GGG D ARTWGS+ +G RG +A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GK P RRY+L DFAGADDVCFN AS EGL+IFLERCE SG LS+LWADLTT++SA+T+KSC PSQSCFRWNC+CGRQ + Y G S + L C+ A GCSQ +DF EGE YLLPLGACVGED+EAAEA GY LPL CE VALMPLIAWRRR ESR F+ARS+AA XXXXXXXXXX +T++ TV+ LFD RVAAWM+DTG KALEFEALCVSWLK E ++ E + RSG GR AIVAAV HAEGC RR+LALAGKISAEL+ AKMLAACEQVEMP +PVLAGMEVSGVVFLPERVTRFS ALG HLEGL+RTAV+AVGGRDFNLASPDQ VADILFKHLKLP+PP+KAGSVHASTSA+VL LQGKHAVVAP+LEFRGV+KYKTTYVDKLAERALGAAAADSAVPASQ G GA RIHA WNQTSARTGRLSCSRPNLQQ
Sbjct: 1 MEKFRRPLWPDDHRFGA-----SGIGAG-GERGHGKGPGTASDRHISQSFAN-ARTSQHSSPFLHTPTSGPRGTGGGMVSFSPALSRASSTMMTPVQQTQQQPGG----FSMFGGKAYSTPA----SHGSISSQPPLSSHTPIDSNTRTVAPGTIPYGSGGSSGVGGGLARFKTLAQETQEEDHKKQQE--RR-----GGSGRGNSSGCGIRDSTVRGMPSPSSNFLAPSSLMGSPPNSLTPCDDSPFSSAAYTFTPPSSAAPPSYSNWPTGPSTAAGRKRPRAPSTATAALGRP--------MTPGTVRSVGGGNLSADVSGARTWGSLAEGSRG-------------------RAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKXXXXXXXXXXXXSPTPRRYKLDDFAGADDVCFNAASTVQTSTMGRLPPYPATSPAVILPRNSAASSEGLAIFLERCEVSGVASLSVLWADLTTSFSAMTVKSCLPSQSCFRWNCACGRQ------------GLCYAFFRGVDPSPSLL------TCASAARTESDTSGCSQEDDFEEGEMYLLPLGACVGEDKEAAEAAGYHLPLDCE--------------------------VALMPLIAWRRRPESRTFLARSAAAAAEGGSDRDGHEPSVDSXXXXXXXXXX------------------HVSTKHHT-TVSRLFDTRVAAWMTDTGKADKALEFEALCVSWLKGEGSDAVHKPDAEGVNARSGDGGRLPAIVAAVVHAEGCCRRNLALAGKISAELEGAKMLAACEQVEMPTVPVLAGMEVSGVVFLPERVTRFSNALGNHLEGLKRTAVKAVGGRDFNLASPDQAKKQQIGKRMQQGRIDGSSRSRRRVASFRTGSCQRGLREGAHGGQGGGTAVADILFKHLKLPSPPLKAGSVHASTSAEVLEGLQGKHAVVAPILEFRGVNKYKTTYVDKLAERALGAAAADSAVPASQ--GAGATRIHATWNQTSARTGRLSCSRPNLQQ 918
BLAST of mRNA_P-littoralis_Contig17.149.3 vs. uniprot
Match: A0A6H5JBL3_9PHAE (DNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL3_9PHAE) HSP 1 Score: 450 bits (1157), Expect = 1.380e-143 Identity = 231/264 (87.50%), Postives = 243/264 (92.05%), Query Frame = 2
Query: 3164 MAADYSQIEMRVLADACRDPGLRGLFASAGDGNTSNGANSGNKGRGDVYRKLAAQVFGKEESGITDAERTRAKVVCLGIIYGMGTPQVAKKLEITESQAQGLVRSFLRAFPGIEPFMAATRRCARETGYVCTLTGRRRHLPEINNSRNATMKAQAERQAVNSVVQGTAADIVKTAMVLVARRLDAWRSSLEEGLDCPRLIMQIHDELVLECPACEEDLERLKGLLAECMEVEAPAMLGIQCPLTVNMLVGMSWGSMRRVVSHDE 3955
MAADYSQIEMRVLADACRDPGLR LFA+ G N + GA +G GDVYRKLAAQVFGKEE ++D ER RAKVVCLGI YGMGTPQVAKKLEITESQAQGLVRSFL+AFPGIEPFMAATRR ARE GYVCTLTGRRRHLPEINNSRNA KAQAERQAVNSVVQGTAADI+KTAMVLVARRLDAWRS L+EGLDCPRLIMQIHDELVLECPACEEDLE+LKGLLA+CMEVEAPA+LGI+CPLTVNMLVGMSWGSMRRVVSHDE
Sbjct: 1 MAADYSQIEMRVLADACRDPGLRNLFATLGGTNDA-GAGTGG---GDVYRKLAAQVFGKEEQSVSDEERNRAKVVCLGITYGMGTPQVAKKLEITESQAQGLVRSFLKAFPGIEPFMAATRRFARENGYVCTLTGRRRHLPEINNSRNAAAKAQAERQAVNSVVQGTAADIMKTAMVLVARRLDAWRSRLDEGLDCPRLIMQIHDELVLECPACEEDLEKLKGLLADCMEVEAPAVLGIKCPLTVNMLVGMSWGSMRRVVSHDE 260
BLAST of mRNA_P-littoralis_Contig17.149.3 vs. uniprot
Match: A0A7S4JPM5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JPM5_9STRA) HSP 1 Score: 298 bits (763), Expect = 1.050e-79 Identity = 261/857 (30.46%), Postives = 386/857 (45.04%), Query Frame = 2
Query: 1520 ADFAGADDVCF-NPGASLEGLSIFLERCEASGAVLLSMLW--ADLTTNYSAVTIKSC-QPSQSCFRWNCSCGRQPRARQATAPIIGAIVYLPATGERASQAALAGEEAWICSFRAVGGCSQVEDFPEGETYLLPLGACVGEDQEAAEAGGYQ-------LPLQCEASYDERWGALAKI-VAMPIKKVAFNAQVALMPLIAWRRRRESRDFVARSSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGCGATTSDGSHQQATTEYDLSTVAGLFDPRVAAWMSDTGSTGKALEFEALCVSWLKDEAANGESASVRSGGNGRSSAIVAAVTHAEGCSRRSLALA----GKISAELDRAKMLAACEQVEMPAIPVLAGMEVSGVVFLPERVTRFSEALGRHLEGLERTAVEAVGGRDFNLASPDQVADILFKHLKLPAPP-----VKAGSVHASTSADVLARLQ-------GKHAVVAPVLEFRGVHKYKTTYVDKLAERALGAAAADSAVPASQIAGVG--------------AVRIHAAWNQTSARTGRLSCSRPNLQQIPKSSDPLTGVEGVNVRDAFA-ASKSFTLMAADYSQIEMRVLADACRDPGLRGLFASAGDGNTSNGANSGNKGRGDVYRKLAAQVFGKEESGITDAERTRAKVVCLGIIYGMGTPQVAKKLEITESQAQGLVRSFLRAFPGIEPFMAATRRCARETGYVCTLTGRRRHLPEINNSRNATMKAQAERQAVNSVVQGTAADIVKTAMVLVARRLDAWRSSLEEGLDCP-------RLIMQIHDELVLECPACEEDLERLKGLLAECMEVEAPAMLGIQCPLTVNMLVGMSWGSMRRV 3940
A F G ++ F N G S E L +FL + ++ V +M++ D TT + + K C Q C WNC C Q RA QA+AP++GA++ +P E A ETY+LPLG + D G++ P C S +RW A I + + KV + A++ LMP R + +D SH Q DL + G++D R+A+W+ S LEFE + NG V V+ H +R L L I ++ + AA + +E P VL+ ME +G+ P R+ + +A+ + +E L A F L+SP QV+ +LF + + P AGS H STS + L +Q + ++ +LEFR ++K TTY+ L A A P S+ G ++RIH W QT+ RTGRLSC +PN+QQIP S V GVN RD+F +S+ L+ ADYSQ E+R+LA D L +F S K D+Y+ +A+ GK ++ ER+ K V L ++YGMG QVAKKL + S AQ + SF R F G+ ++ AT+ AR +V T++GRRR+L +I +S N +AQAERQAVN+++QG+AADI+K AM+ ++ R+ W+ +E LD P +++QIHDEL+ E A E D++ L+ + C E ++ L + + GMSWGSM +
Sbjct: 386 ASFEGIEECEFMNAGTSDESLELFLSKVKSKRVVAWTMVFLDGDCTTPFLPTSKKYCTQKGPRCTMWNCICDGQIRAMQASAPVLGAMISVPLPSEGEPNA-------------------------NAETYILPLGPALNLDSVPGLTTGFERMTSWPVAPFLCGTSLRQRWNAFRSILIDRHVTKVTYCAELGLMPFHFHRMQDVE----------------------------------------------GGRADASHAQL----DL-ILPGIWDLRLASWVLLPHSKDSDLEFETM---------RNGFPHLVDKIPKHPKPDNVSTQLHGLISAREDLELLLVLHPIIGRQISDKGLRAAFDDIESPLQSVLSAMECTGIGVRPSRLPK--QAVEQKIEKLTTEAQSVSKDNTFLLSSPQQVSHLLFDIMGITVPKGLSTKQVAGSQHRSTSEESLKAIQTEAKKKGNNYRIIDIILEFRTLNKMLTTYIRPLPNFARELA------PKSKSRGKRRKRSKQQSKDDKSKSLRIHPMWMQTAVRTGRLSCRKPNMQQIPTDS-----VLGVNPRDSFTVSSRKKCLVTADYSQKEIRILAHMSNDDTLINMFRS--------------KDEVDIYKAMASACCGKPVHSVSGEERSIYKQVTLAVLYGMGVTQVAKKLNVNRSTAQKFLNSFFRRFQGVRRWIEATKEFARRHQFVTTISGRRRYLDDICSSDNGK-RAQAERQAVNTIIQGSAADIMKLAMLKMSSRIMDWK---KECLDSPGGSVVPPMILLQIHDELLFETNANEIDVKMLRDAIMRCCAEECVREFNLKVQLKLKCMYGMSWGSMEEL 1126
BLAST of mRNA_P-littoralis_Contig17.149.3 vs. uniprot
Match: A0A6V2EN94_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2EN94_9STRA) HSP 1 Score: 297 bits (761), Expect = 1.850e-79 Identity = 250/837 (29.87%), Postives = 383/837 (45.76%), Query Frame = 2
Query: 1526 FAGADDVCFNPGASL-EGLSIFLERCEASGAVLLSMLWADLTTNYSAVTIKSCQP-----SQSCFRWNCSCGRQPRARQATAPIIGAIVYLPATGERASQAALAGEEAWICSFRAVGGCSQVEDFPEG-ETYLLPLG-ACVGEDQEAAEAGGYQL------PLQCEASYDERWGALAKIVAMP-IKKVAFNAQVALMPLIAWRRRRESRDFVARSSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGCGATTSDGSHQQATTEYDLSTVAGLFDPRVAAWMSDTGSTGKALEFEALCVSWLKDEAANGESASVRSGGNGRSSAIVAAVTHAEGCSRRSLALAGKISAELDRAKMLAACEQVEMPAIPVLAGMEVSGVVFLPERVTRFSEALGRHLEGLERTAVEAVGGRDFNLASPDQVADILFKHLKLPAPP-----VKAGSVHASTSADVLARLQGK--------HAVVAPVLEFRGVHKYKTTYVDKLAERALGAAAADSAVPASQIAGVGAVRIHAAWNQTSARTGRLSCSRPNLQQIPKSSDPLTGVEGVNVRDAFAASKSFT-LMAADYSQIEMRVLADACRDPGLRGLFASAGDGNTSNGANSGNKGRGDVYRKLAAQVFGKEESGITDAERTRAKVVCLGIIYGMGTPQVAKKLEITESQAQGLVRSFLRAFPGIEPFMAATRRCARETGYVCTLTGRRRHLPEINNSRNATMKAQAERQAVNSVVQGTAADIVKTAMVLVARRLDAWRSSLEE--GLD-CPRLIMQIHDELVLECPACEEDLERLKGLLAECMEVEAPAMLGIQCPLTVNMLVGMSWGSMRRV 3940
F G +D + AS E L FLE +A V ++++ D + S + SC+ C WNC+C Q RA +A+AP++GA+ P + +E I S SQ+ + + ++LPLG + E + +++ P C+ S +RW I+ + V FNA V LMP R + ++ + L +V +D R+A+W+ + + LE +A C + + + S +V + ++ A E R L + ++ + +A ++E P +L+ ME GV F+P+R + L + ++ L A +F L+SP QV+ +LF L L P +GS H STS + L +Q + H ++ +LEFR ++K TTY+ L A + A+RIH W QT+ RTGRLSC +PN+QQ+P G GVN RD F A+ S L A DYSQ E+R+LA D L +F G D+Y+++++ + G ++D ER K V L I+YGMG PQVAKKL +T S AQ SF R F G+ +M T+ AR+ +V T+ GRRR+L +IN++ A KAQAERQAVN+++QG+AAD++K AM+ A RL W + E G + PRL++QIHDEL+ E A E D+ +LK ++ +C E ++ PL++ G+SWG M V
Sbjct: 385 FDGIEDCNIHNAASKDESLRCFLEMVKAQRYVAWTIIFLD--QDCSTAFLPSCEKYCTEKGPHCRMWNCTCDGQVRATRASAPVLGAMFVFPHGMQ---------DEHEIDSVDNPNTNSQILNIGDNLACFILPLGPTMMSEGTPELDRDFHRMARWPVIPFHCDTSISQRWDTFRSILLQKHVTLVTFNAVVGLMPFHFHR--------------------------------------------------------SNDKEGMMDLILPSV---WDLRLASWILIPHAKAEQLELKAKCEGFPHLQTKS-SSYTVPPNASNPLKGLLKARNQLEFLFR----LYPIVDKQMRDKGLNSAFLEIESPVQSILSAMECIGVGFVPKRFLGIQKQLEKKIDELVAEARSIAKDNNFLLSSPQQVSHLLFDVLNLAIPQGLQAKTVSGSQHRSTSEEALKAIQAEAKSKSNTGHRIIDILLEFRSLNKLLTTYIRPLPNFARKGEYRKKKSKKYKTDVTMAMRIHPMWMQTAVRTGRLSCRKPNMQQVPN-----VGAFGVNPRDGFVATSSEKCLFACDYSQNEIRILAHMSGDQTLISMFREDGV---------------DIYKQMSSAITGMPVDEVSDKERKIYKQVTLAILYGMGVPQVAKKLSVTRSTAQNFFTSFYRRFHGVRQWMEQTKDFARQNCFVTTIAGRRRYLDDINSTDTAK-KAQAERQAVNTIIQGSAADLIKLAMLKTASRLMDWHKEVIEAGGTNIAPRLLLQIHDELLFEVMANETDVSKLKDIVTQCCGEECVEEFKLKVPLSLKCTCGISWGLMNEV 1125
BLAST of mRNA_P-littoralis_Contig17.149.3 vs. uniprot
Match: A0A7R9VQU8_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VQU8_9STRA) HSP 1 Score: 277 bits (709), Expect = 5.280e-78 Identity = 179/479 (37.37%), Postives = 261/479 (54.49%), Query Frame = 2
Query: 2564 ACEQVEMPAIPVLAGMEVSGVVFLPERVTRFSEALGRHLEGLERTAVEAVGGRDFNLASPDQVADILFKHLKLPAPPVKA-----GSVHASTSADVLARLQGKHA-------VVAPVLEFRGVHKYKTTYVDKLAERALGAAAADSAVPA-------SQIAGVGAVRIHAAWNQTSARTGRLSCSRPNLQQIPKSSDPLTGVEGVNVRDAFAASKSFTLMAADYSQIEMRVLADACRDPGLRGLFASAGDGNTSNGANSGNKGRGDVYRKLAAQVFGKEESGITDAERTRAKVVCLGIIYGMGTPQVAKKLEITESQAQGLVRSFLRAFPGIEPFMAATRRCARETGYVCTLTGRRRHLPEINNSRNATMKAQAERQAVNSVVQGTAADIVKTAMVLVARRLDAWRSSLEEGLD----CPRLIMQIHDELVLECPACEEDLERLKGLLAECMEVEAPAMLGIQCPLTVNMLVGMSWGSM 3931
A + +E P VL+ ME +G+ F P R+ + L R ++ L A F L+SP QV+ LF +++P P + GS H STS + L ++ + +V +LEFR ++K TTY+ L A + S S G VRIH W QT+ RTGRLSC +PN+QQIP GV GVN RDAF AS L+ ADY Q E+R+LA D L +F S K D+Y+++A+ K ++D ER K V L ++YGMG PQVAKKL ++ S AQ + +F R F G+ ++ AT+ AR +V T++GRRR+L +I + + +AQAERQAVN+++QG+AADI+K AM+ ++ R+ W+ + EGLD PR+++QIHDEL+ E A E D++RL+ + C E ++ LT+ + +G+SWGSM
Sbjct: 27 AFDDIESPLQSVLSSMECTGIDFRPSRLLGIQQQLERKIQALTDEARSITKDSTFLLSSPQQVSHYLFDIMRIPLPKGLSTKQVGGSQHRSTSEEALKAIRAEAKKKGNPLHIVDIILEFRTLNKMLTTYIRPLPNFARDMSTGKSRSXXXXXXXRQSNDEKSGFVRIHPMWMQTAVRTGRLSCRKPNMQQIPTD-----GVLGVNPRDAFTASPHKCLVTADYCQKEIRILAHMANDDTLLNMFRS--------------KEEVDIYKQMASACCNKPVEKVSDEERRIYKQVTLAVLYGMGVPQVAKKLSVSRSTAQNFLNTFFRRFQGVSRWIEATKDFARRHQFVTTISGRRRYLDDICSG-DKGKRAQAERQAVNTIIQGSAADIMKLAMLKMSARIMDWKKA--EGLDSLGSAPRILLQIHDELLFETDANESDVKRLRDAIMRCCADECVREFDLKVQLTMTLRIGISWGSM 483
BLAST of mRNA_P-littoralis_Contig17.149.3 vs. uniprot
Match: A0A7S3V8E1_9STRA (DNA-directed DNA polymerase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V8E1_9STRA) HSP 1 Score: 290 bits (743), Expect = 2.570e-76 Identity = 255/860 (29.65%), Postives = 385/860 (44.77%), Query Frame = 2
Query: 1553 NPGASLEGLSIFLERCEASGA----VLLSMLWADLT--TNYSAVTIKSCQPS-QSCFRWNCSCGRQPRARQATAPIIGAIVYLPATGERASQAALAGEEAWICSFRAVGGCSQVEDFPEGETYLLPLGACVGEDQEAAEA-----GGYQ-------LPLQCEASYDERWGALAKI-VAMPIKKVAFNAQVALMPLIAWRRRRESRDFVARSSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGCGATTSDGSHQQATTEYDLSTVAGLFDPRVAAWMSDTGSTGKALEFE----ALCVSWLKDEAANGESASVRSGGNGRSSAIVAAVTHAEGCSRRSLALAGKISAELDRAKMLAACEQVEMPAIPVLAGMEVSGVVFLPERVTRFSEALGRHLEGLERTAVEAVGGRDFNLASPDQVADILFKHLKLPAP------------PVKAGSVHASTSADVLARLQGKHA--------VVAPVLEFRGVHKYKTTYVDKLAERALG---------AAAADSAVPASQIAGVGAVR-------IHAAWNQTSARTGRLSCSRPNLQQIPKSSDPLTGVEGVNVRDAFAAS-KSFTLMAADYSQIEMRVLADACRDPGLRGLFASAGDGNTSNGANSGNKGRGDVYRKLAAQVFGKEESGITDAERTRAKVVCLGIIYGMGTPQVAKKLEITESQAQGLVRSFLRAFPGIEPFMAATRRCARETGYVCTLTGRRRHLPEINNSRNATMKAQAERQAVNSVVQGTAADIVKTAMVLVARRLDAWRSSLE---EGLDCPRLIMQIHDELVLECPACEEDLERLKGLLAECMEVEAPAMLGIQCPLTVNMLVGMSWGSMRRV 3940
N G+S E L+ FL+ + S + +M++ D T T + T K C P C WNC+C Q RA QA+ P++GA+ P +SQ + E S + C +LLPL C D E GY+ LP+ C+ S RW I + + KV FNAQV LMP + D A ++ + S +Q + Y + ++D R+A+W+ + + LE E + K + +A+ G ++ A E AL + L+ + + ++E P VL+ ME G+ F P+++ R + L ++ L + A E DF L+SP QVA LF + L AP P + H STS + L +Q ++ +V +L FRG++K +TY+ + A A + S+I+ R IH W QT+ RTGRLSC +PNLQQ+P S V GV R AF S K L A DYSQ E+R+LA D L LF G DVY+++++ + GK + +TD ER+ AK + L I+YGMG VAK+L + + A+ RSF FP ++ +M T AR YV T++GRRR+L I N A +++QAERQA+N+++QG+AAD++K AM+ +A R+ WR E PR+++QIHDEL+ E A + D++RL+ ++ C E ++ PL + +G SWGSM+ +
Sbjct: 595 NAGSSTEALAAFLQMIKQSKQQKTYITWTMIFHDSTCSTPFLPCTKKYCTPKGPPCTMWNCTCDNQIRAMQASKPVVGAMFVFP-MNVNSSQESQESESLDTDSAHSSLDC-----------FLLPL--CPTVDPEVGTGPKDIDAGYERMAHFPFLPILCDTSLQARWDTFRSILIDRHVIKVTFNAQVGLMPY----HYHCANDIAATPTSTGSDKHENE-----------------------------SNSTNRNQNHYSGYLDMVLPNIWDLRLASWILSPHAEEETLEMENKKAGFSHLYPKPKCPIPPNATPHLTG------LIEAKEQLEFL----YALYPIVDGLLESNGLKHSFCEIESPVQSVLSAMECFGIGFKPDQLIRIQKQLEDTIDNLNQEARELTKDCDFMLSSPQQVASFLFDKMGLNAPERTRATATAKARPGNSKGQHRSTSEESLKAIQNEYKKKNGESLRIVELILTFRGLNKVLSTYIRPYPKLARDDNSNLIHSRKATKTRSKKKSKISNSSTTRTTAKIKKIHPMWMQTAVRTGRLSCRKPNLQQVPTGS-----VLGVCPRSAFTTSAKDSCLFACDYSQKEVRILAHMSGDANLMNLFTQPGTD--------------DVYKQMSSVISGKRSNEVTDKERSIAKQLTLAIMYGMGINSVAKQLGVNKESAKSFFRSFYGRFPDVKRWMDQTISSARTNKYVTTISGRRRYLDNITNEDRA-LRSQAERQAINTIIQGSAADLMKLAMLKMASRITDWRKERTGNGESNTPPRMLLQIHDELLFEIVANQADVDRLRSVVTRCCTEECVEEFRLKVPLKLKCSIGTSWGSMKEL 1377
BLAST of mRNA_P-littoralis_Contig17.149.3 vs. uniprot
Match: A0A7S2LIW8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LIW8_9STRA) HSP 1 Score: 269 bits (687), Expect = 4.470e-74 Identity = 182/487 (37.37%), Postives = 257/487 (52.77%), Query Frame = 2
Query: 2510 LALAGKISAELDRAKMLAACEQVEMPAIPVLAGMEVSGVVFLPERVTRFSEALGRHLEGLERTAVEAVGGRDFNLASPDQVADILFKHLKLPAPP------VKAGSVHASTSADVLARLQGK--HAVVAPVLEFRGVHKYKTTYVDKLAERALGAAAADSAVPASQIAGVGAVRIHAAWNQTSARTGRLSCSRPNLQQIPKSSDPLTGVEGVNVRDAFAASK-SFTLMAADYSQIEMRVLADACRDPGLRGLFASAGDGNTSNGANSGNKGRGDVYRKLAAQVFGKEESGITDAERTRAKVVCLGIIYGMGTPQVAKKLEITESQAQGLVRSFLRAFPGIEPFMAATRRCARETGYVCTLTGRRRHLPEINNSRNATMKAQAERQAVNSVVQGTAADIVKTAMVLVARRLDAWRSSLEEGLDC------PRLIMQIHDELVLECPACEEDLERLKGLLAECMEVEAPAMLGIQCPLTVNMLVGMSWG 3925
LA+ IS + + + + +Q+E P VL+ ME GV FLP + L +E L A G F +SP QVA +L+ LKLP P S H STS +L ++ H ++ +LEFR ++K T+Y+ L A ++++ + I VRIH W QT+ RTGRLSC +PN+QQIPK S V RDAF A+ L + DYSQ E+R+LA D L LF NK D+Y+++++ V GK +T ER K V L I+YGMG QV+KKL I S+AQ SF F ++ T+ A++ G+V T+ GRRR+L EI S ++ +AQAERQAVNSV+QG+AAD++K AM+ + R+ W +EG PR+++QIHDEL+ E ++D++RLK + C E L ++ PL VN VG SWG
Sbjct: 112 LAMYPIISRSITKKGLADSLDQIEGPLQSVLSAMECIGVGFLPHTYQNIEQRLDNRIEELSLEARNIAGNNSFLCSSPQQVAQLLYDVLKLPVPKDTMPRTATTSSQHRSTSEAILEAIKSSTPHRIIDILLEFRSLNKLLTSYIKPLPFLARKPYLREASLSSKPI-----VRIHPMWMQTAVRTGRLSCRKPNMQQIPKDS-----TFDVAPRDAFCATAHDMCLFSFDYSQNEVRILAHMSEDQQLISLFL--------------NKDGLDIYKQMSSLVTGKTVDSVTIEERAITKQVVLAILYGMGISQVSKKLGINRSKAQHFFNSFFARFKQTRRWIDMTKESAKKLGFVTTIVGRRRYLDEIR-SNDSAKRAQAERQAVNSVIQGSAADLMKLAMLKIGSRITDWH---KEGHSAGGTGRHPRMLLQIHDELLFEIANNKDDIQRLKDAIICCCAEECELDLKLKVPLKVNCSVGSSWG 570
BLAST of mRNA_P-littoralis_Contig17.149.3 vs. uniprot
Match: B8C4R5_THAPS (DNA polymerase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4R5_THAPS) HSP 1 Score: 262 bits (669), Expect = 1.560e-72 Identity = 169/473 (35.73%), Postives = 246/473 (52.01%), Query Frame = 2
Query: 2555 MLAACEQVEMPAIPVLAGMEVSGVVFLPERVTRFSEALGRHLEGLERTAVEAVGGRDFNLASPDQVADILFKHLKLPAPP--VKAGSVHASTSADVLARLQGK-----HAVVAPVLEFRGVHKYKTTYVDKLAERALGAAAADSAVPASQIAGVGAVRIHAAWNQTSARTGRLSCSRPNLQQIPKSSDPLTGVEGVNVRDAFAASKSFT--LMAADYSQIEMRVLADACRDPGLRGLFASAGDGNTSNGANSGNKGRGDVYRKLAAQVFGKEESGITDAERTRAKVVCLGIIYGMGTPQVAKKLEITESQAQGLVRSFLRAFPGIEPFMAATRRCARETGYVCTLTGRRRHLPEINNSRNATMKAQAERQAVNSVVQGTAADIVKTAMVLVARRLDAWR--SSLEEGLDCPRLIMQIHDELVLECPACEEDLERLKGLLAECMEVEAPAMLGIQCPLTVNMLVGMSWGSMRRV 3940
+L + E +E P +LA ME GV F P + R +E LE A F L+SP Q+++ L+ LK+ P V+ STS + L L+ H ++ +LEFR ++K TTY+ L L RIH W++ + RTGRLSC +PNLQQ+PK +G +VR +F SK T L A DYSQ E+R+LA D L LF D N D+Y+++++ + K IT ER + K V L ++YGM QVAKKL IT+SQA ++ F R F G++ +M T+ AR YV T+ GRRR+L I++ N KAQAERQA+N+V+QG+AAD++K +M+ +A L W+ +S PR+++QIHDELVLE E D+ RL+ + + + + ++ PL + GMSW M+ +
Sbjct: 68 LLPSLENIEAPVQSILAAMECRGVAFYPNHLKRNEAQANERIEALEAQARTITNDSSFLLSSPQQISNYLYDILKMKVPSGLVQKTKSQRSTSEETLQALKAASNGSPHPIIDVILEFRTLNKLLTTYIKPLPTFCLPQ------------------RIHPQWSECAVRTGRLSCRQPNLQQVPKD-------DGASVRRSFVPSKKETMCLFACDYSQKEVRILAHMSGDKALISLFQM--DANV------------DIYKQMSSLIRNKPVESITAQERAQFKQVTLALLYGMSPNQVAKKLNITKSQAIQMMNDFFRRFQGVKNWMEDTKEFARRNHYVVTIAGRRRYLDGIDSDDNGA-KAQAERQAINTVIQGSAADLMKCSMINIAENLQRWQEDNSSNGTSSRPRILLQIHDELVLELNFVETDIRRLQAIATKSLTRDCEEYFHLKVPLLLTCSCGMSWHGMKAI 500
BLAST of mRNA_P-littoralis_Contig17.149.3 vs. uniprot
Match: A0A3A0G8D4_9BACT (DNA polymerase I (Fragment) n=1 Tax=bacterium TaxID=1869227 RepID=A0A3A0G8D4_9BACT) HSP 1 Score: 263 bits (673), Expect = 1.320e-71 Identity = 174/471 (36.94%), Postives = 256/471 (54.35%), Query Frame = 2
Query: 2537 ELDRAKMLAACEQVEMPAIPVLAGMEVSGVVFLPERVTRFSEALGRHLEGLERTAVEAVGGRDFNLASPDQVADILFKHLKLPAPPVKAGSV-HASTSADVLARLQGKHAVVAPVLEFRGVHKYKTTYVDKLAERALGAAAADSAVPASQIAGVGAVRIHAAWNQTSARTGRLSCSRPNLQQIPKSSDPLTGVEGVNVRDAFAASKSFTLMAADYSQIEMRVLADACRDPGLRGLFASAGDGNTSNGANSGNKGRGDVYRKLAAQVFGKEESGITDAERTRAKVVCLGIIYGMGTPQVAKKLEITESQAQGLVRSFLRAFPGIEPFMAATRRCARETGYVCTLTGRRRHLP----EINNSRNATMKAQAERQAVNSVVQGTAADIVKTAMVLVARRLDAWRSSLEEGLDCPRLIMQIHDELVLECPACEEDLERLKGLLAECMEVEAPAMLGIQCPLTVNMLVGMSWGSMR 3934
ELDR + +++++P +PVL ME++GV+ + + R SE L L +E V A+ G FNL SP Q+ +LF LKL AP + + AS +ADVL L+G H ++ +LE R + K K TY+D L ++ R+H +NQT A +GRL+ PNLQ IP ++ G VR AF A + L++ADYSQ+E+R+ A C+DPGLR FA+ D ++R AA V G +T +R AKVV GI+YGMG +A++ T +AQ + + FP I+ ++ T+R ARE GYV TL GRRR+ P + ++R M+A AER+A+N +QG+AADI+K AM+ + L E GL RL++Q+HDELVLE P ++++E + L+ ME P + PL V++ VG SW ++
Sbjct: 218 ELDRVGLRRLLDEIDLPLVPVLLDMELAGVLVDTDLLARLSERLAVRLAEIE-AEVYALVGAPFNLNSPQQLGAVLFDQLKLKAPGGRQTATGQASVAADVLETLRGSHPIIDLILEQRQLTKLKGTYLDAL----------------PKLVNPRTGRVHTNFNQTGAVSGRLASQDPNLQNIPIRTEL-----GREVRRAFVAPPGWKLVSADYSQVELRIAAHICQDPGLRAAFAAGAD----------------IHRATAATVLGIPPEAVTADQRRFAKVVNFGILYGMGAQALAQQTGSTTKEAQAFIEVYFAGFPNIKRYIEDTKRQAREQGYVETLLGRRRYFPVLGVQTRDNRTRLMQASAEREAINHPMQGSAADIIKVAMIRIHATL------AERGLRA-RLLLQVHDELVLEAP--DDEVEAVVALVRNLMEGAYP----LDPPLKVDIGVGSSWDEVK 637 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig17.149.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig17.149.3 >prot_P-littoralis_Contig17.149.3 ID=prot_P-littoralis_Contig17.149.3|Name=mRNA_P-littoralis_Contig17.149.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1284bp MNNDGQRAVEWNLVPPESPPSGPALHNQAKNKPFALLKSLEAPRGPEYFAback to top mRNA from alignment at P-littoralis_Contig17:664371..685287- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig17.149.3 ID=mRNA_P-littoralis_Contig17.149.3|Name=mRNA_P-littoralis_Contig17.149.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=20917bp|location=Sequence derived from alignment at P-littoralis_Contig17:664371..685287- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig17:664371..685287- >mRNA_P-littoralis_Contig17.149.3 ID=mRNA_P-littoralis_Contig17.149.3|Name=mRNA_P-littoralis_Contig17.149.3|organism=Pylaiella littoralis U1_48|type=CDS|length=3852bp|location=Sequence derived from alignment at P-littoralis_Contig17:664371..685287- (Pylaiella littoralis U1_48)back to top |