prot_P-littoralis_Contig166.10.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig166.10.1
Unique Nameprot_P-littoralis_Contig166.10.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length228
Homology
BLAST of mRNA_P-littoralis_Contig166.10.1 vs. uniprot
Match: A0A6H5JWG1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWG1_9PHAE)

HSP 1 Score: 364 bits (935), Expect = 4.660e-121
Identity = 178/215 (82.79%), Postives = 195/215 (90.70%), Query Frame = 0
Query:    1 MMWLANETRPDILNAVRAVARYSHALKLVHWRAALHVLMYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLPRTQKSVTLSSTEAEYVALAERMKEAIFLRYLWNFILPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHARPALQRADFLTKALPKDAFCAHRDFVMNIR 215
            +MWLAN+TRPDILNAVRAVARYSHA K +HW AALHVLMYVR T+ +GITFQRG  GG+HMELFVDSDFA+KATDRRSVSGA+VMFAGAC+MYL RTQKSVTLSSTEAEYVA+++ MKEAIFLRYLW FI P  DVGCT V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARGEF+VVH R  LQRADFLTK LPK+ FCAHRDFVMNIR
Sbjct:  362 LMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTSGYGITFQRGTVGGDHMELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 576          
BLAST of mRNA_P-littoralis_Contig166.10.1 vs. uniprot
Match: A0A6H5KGK7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGK7_9PHAE)

HSP 1 Score: 364 bits (935), Expect = 1.850e-118
Identity = 178/215 (82.79%), Postives = 195/215 (90.70%), Query Frame = 0
Query:    1 MMWLANETRPDILNAVRAVARYSHALKLVHWRAALHVLMYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLPRTQKSVTLSSTEAEYVALAERMKEAIFLRYLWNFILPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHARPALQRADFLTKALPKDAFCAHRDFVMNIR 215
            +MWLAN+TRPDILNAVRAVARYSHA K +HW AALHVLMYVR T+ +GITFQRG  GG+HMELFVDSDFA+KATDRRSVSGA+VMFAGAC+MYL RTQKSVTLSSTEAEYVA+++ MKEAIFLRYLW FI P  DVGCT V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARGEF+VVH R  LQRADFLTK LPK+ FCAHRDFVMNIR
Sbjct:  586 LMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTSGYGITFQRGTVGGDHMELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 800          
BLAST of mRNA_P-littoralis_Contig166.10.1 vs. uniprot
Match: A0A6H5K5L3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5L3_9PHAE)

HSP 1 Score: 354 bits (908), Expect = 3.760e-117
Identity = 175/215 (81.40%), Postives = 191/215 (88.84%), Query Frame = 0
Query:    1 MMWLANETRPDILNAVRAVARYSHALKLVHWRAALHVLMYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLPRTQKSVTLSSTEAEYVALAERMKEAIFLRYLWNFILPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHARPALQRADFLTKALPKDAFCAHRDFVMNIR 215
            +MWLAN+TRPDILNAVRAVARYSHA K +HW AALHVLMYVR T+  GITFQRG  GG+HMEL VDSDFA+KATDRRSVSGA+VMFAGAC+MYL RTQKSVTLSSTEAEYVA+++ M EAIFLRYLW  I   LDVGCT V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARGEF+VVH R  LQRADFLTK LPK+ FCAHRDFVMNIR
Sbjct:  349 LMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTSGCGITFQRGTVGGDHMELLVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMTEAIFLRYLWKIIFSVLDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 563          
BLAST of mRNA_P-littoralis_Contig166.10.1 vs. uniprot
Match: A0A6H5KAC2_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAC2_9PHAE)

HSP 1 Score: 364 bits (935), Expect = 8.730e-113
Identity = 178/215 (82.79%), Postives = 195/215 (90.70%), Query Frame = 0
Query:    1 MMWLANETRPDILNAVRAVARYSHALKLVHWRAALHVLMYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLPRTQKSVTLSSTEAEYVALAERMKEAIFLRYLWNFILPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHARPALQRADFLTKALPKDAFCAHRDFVMNIR 215
            +MWLAN+TRPDILNAVRAVARYSHA K +HW AALHVLMYVR T+ +GITFQRG  GG+HMELFVDSDFA+KATDRRSVSGA+VMFAGAC+MYL RTQKSVTLSSTEAEYVA+++ MKEAIFLRYLW FI P  DVGCT V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARGEF+VVH R  LQRADFLTK LPK+ FCAHRDFVMNIR
Sbjct: 1662 LMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTSGYGITFQRGTVGGDHMELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 1876          
BLAST of mRNA_P-littoralis_Contig166.10.1 vs. uniprot
Match: A0A6H5JMP2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP2_9PHAE)

HSP 1 Score: 356 bits (913), Expect = 1.570e-112
Identity = 175/215 (81.40%), Postives = 192/215 (89.30%), Query Frame = 0
Query:    1 MMWLANETRPDILNAVRAVARYSHALKLVHWRAALHVLMYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLPRTQKSVTLSSTEAEYVALAERMKEAIFLRYLWNFILPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHARPALQRADFLTKALPKDAFCAHRDFVMNIR 215
            +MWLAN+TRPDILNAVRAVARYSHA K +HW AALHVLMYVR T+ +GITFQRG  GG+HMELFVDSDFA+KATDRRSVSGA+VMFAGAC+MYL RTQKS TLSSTEAEYVA+++ MKEAIFLRYLW FI P  DVGCT V EDNVGA++LASNPATTPNSK IDI+HHFIRERVARG F+VVH R  LQRADFLTK LPK+ FCAHRDFVMNIR
Sbjct:  890 LMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTSGYGITFQRGTVGGDHMELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSGTLSSTEAEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKQIDIRHHFIRERVARGGFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 1104          
BLAST of mRNA_P-littoralis_Contig166.10.1 vs. uniprot
Match: A0A6H5KAQ1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAQ1_9PHAE)

HSP 1 Score: 352 bits (902), Expect = 8.850e-112
Identity = 172/214 (80.37%), Postives = 192/214 (89.72%), Query Frame = 0
Query:    1 MMWLANETRPDILNAVRAVARYSHALKLVHWRAALHVLMYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLPRTQKSVTLSSTEAEYVALAERMKEAIFLRYLWNFILPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHARPALQRADFLTKALPKDAFCAHRDFVMNI 214
            +MWLAN+TRPDILNAVRAVARYSHA K +HW AALHVLM+VR T+ +GITFQRG  GG+HMELFVDSDFA+KATDRRSVSGA+VMFAGAC+MYL RTQKSVTLSSTEAEYVA+++ MKEAIFLR+LW F+ P  DVGCT V EDNVGA +LAS  A+TPNSKHIDI+HHFIRERVARGEF+VVHAR  LQRADFLTK LPK+ FCAHRDFVMNI
Sbjct:  778 LMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMFVRFTSGYGITFQRGTVGGDHMELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRHLWKFVFPGRDVGCTPVWEDNVGAFHLASKSASTPNSKHIDIRHHFIRERVARGEFKVVHARSDLQRADFLTKPLPKETFCAHRDFVMNI 991          
BLAST of mRNA_P-littoralis_Contig166.10.1 vs. uniprot
Match: A0A6H5L5Q2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Q2_9PHAE)

HSP 1 Score: 328 bits (840), Expect = 8.340e-110
Identity = 156/214 (72.90%), Postives = 187/214 (87.38%), Query Frame = 0
Query:    1 MMWLANETRPDILNAVRAVARYSHALKLVHWRAALHVLMYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLPRTQKSVTLSSTEAEYVALAERMKEAIFLRYLWNFILPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHARPALQRADFLTKALPKDAFCAHRDFVMNI 214
            +MWLAN+TRPDILNAVRAVARYS+A K VHW+AALH++MY+R T+ +GITFQRG  GG  +E++VDSD+ASKATDRRSVSG VVM AG+C+ +  RTQKSVTLSSTEAEY A+A+ MKEAIFLRYLW+FI PD DVGCT++ EDNVGA++LA+NPATTPNSKHID++HHFIRERV RGEF+VV+    LQ ADFLTK LPK+AF  HR+FVMN+
Sbjct:  132 LMWLANQTRPDILNAVRAVARYSYAPKSVHWKAALHIVMYIRCTSAYGITFQRGTAGGVSLEVYVDSDYASKATDRRSVSGGVVMCAGSCVSFFSRTQKSVTLSSTEAEYAAMADGMKEAIFLRYLWSFIFPDGDVGCTVIKEDNVGALHLANNPATTPNSKHIDVRHHFIRERVDRGEFKVVYVPSHLQHADFLTKPLPKEAFSVHRNFVMNL 345          
BLAST of mRNA_P-littoralis_Contig166.10.1 vs. uniprot
Match: A0A6H5KPR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPR3_9PHAE)

HSP 1 Score: 319 bits (817), Expect = 6.520e-108
Identity = 158/197 (80.20%), Postives = 174/197 (88.32%), Query Frame = 0
Query:    1 MMWLANETRPDILNAVRAVARYSHALKLVHWRAALHVLMYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLPRTQKSVTLSSTEAEYVALAERMKEAIFLRYLWNFILPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHARPALQRADFLTK 197
            +MWLAN+TRPDILNAVRAVARYSHA K +HW AALHVLMYVR T+ +GITFQRG  GG+HMEL VDSDFA+KATDRRSVSGA+VM AGAC+MYL R QKSVTLSSTEAEY+A+ + MKEAIFLRYLW FI P  DVGCT V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARGEF+VVH    LQRADFLTK
Sbjct:   28 LMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTSGYGITFQRGTVGGDHMELLVDSDFANKATDRRSVSGALVMIAGACVMYLCRMQKSVTLSSTEAEYMAMFDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVPSDLQRADFLTK 224          
BLAST of mRNA_P-littoralis_Contig166.10.1 vs. uniprot
Match: A0A6H5JCD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCD8_9PHAE)

HSP 1 Score: 323 bits (828), Expect = 3.730e-100
Identity = 155/214 (72.43%), Postives = 185/214 (86.45%), Query Frame = 0
Query:    1 MMWLANETRPDILNAVRAVARYSHALKLVHWRAALHVLMYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLPRTQKSVTLSSTEAEYVALAERMKEAIFLRYLWNFILPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHARPALQRADFLTKALPKDAFCAHRDFVMNI 214
            +MWLAN+TRPDILNAVRAVARYS+A K VHW+AALH++MY+R T  +GIT QRG  GG  +E++VDSD+ASKATDRRSVSG VVM AG+C+ +  RTQKSVTLSSTEAEY A+A+ MKEAIFLRYLW+FI PD DVGCT++ EDNVGA++LA+NPATTPNSKHID++HHFIRERV RGEF+VV+    LQ ADFLTK LPK+AF  HR+FVMN+
Sbjct:  900 LMWLANQTRPDILNAVRAVARYSYAPKSVHWKAALHMVMYIRCTRAYGITLQRGTAGGVSLEVYVDSDYASKATDRRSVSGGVVMCAGSCVSFFSRTQKSVTLSSTEAEYAAMADGMKEAIFLRYLWSFISPDGDVGCTVIKEDNVGALHLANNPATTPNSKHIDVRHHFIRERVDRGEFKVVYVPSHLQHADFLTKPLPKEAFSVHRNFVMNL 1113          
BLAST of mRNA_P-littoralis_Contig166.10.1 vs. uniprot
Match: A0A6H5KZC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZC8_9PHAE)

HSP 1 Score: 295 bits (755), Expect = 2.310e-99
Identity = 144/177 (81.36%), Postives = 159/177 (89.83%), Query Frame = 0
Query:   39 MYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLPRTQKSVTLSSTEAEYVALAERMKEAIFLRYLWNFILPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHARPALQRADFLTKALPKDAFCAHRDFVMNIR 215
            MY+R T+ +GITFQ G  GG+HMELFVDSDFA+KATDRRSVSGA+VMFAGAC+MYL RTQKSVTLSSTEAEYVA+++ MKEAIFLRYLW FI P  DVGCT V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARGEF+VVH R  LQRADFLTK LPK+ FCAHRDFVMNIR
Sbjct:    1 MYIRFTSGYGITFQSGTVGGDHMELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 177          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig166.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWG1_9PHAE4.660e-12182.79Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KGK7_9PHAE1.850e-11882.79Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K5L3_9PHAE3.760e-11781.40Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KAC2_9PHAE8.730e-11382.79Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JMP2_9PHAE1.570e-11281.40Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KAQ1_9PHAE8.850e-11280.37Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L5Q2_9PHAE8.340e-11072.90Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KPR3_9PHAE6.520e-10880.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCD8_9PHAE3.730e-10072.43Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KZC8_9PHAE2.310e-9981.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 76..209
NoneNo IPR availablePANTHERPTHR11439:SF338GAG-POL POLYPROTEIN-LIKE PROTEINcoord: 76..209
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 64..202
e-value: 7.07771E-52
score: 162.638

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig166contigP-littoralis_Contig166:88686..89369 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig166.10.1mRNA_P-littoralis_Contig166.10.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig166 88668..89482 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig166.10.1 ID=prot_P-littoralis_Contig166.10.1|Name=mRNA_P-littoralis_Contig166.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=228bp
MMWLANETRPDILNAVRAVARYSHALKLVHWRAALHVLMYVRGTTDFGIT
FQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLPRTQKS
VTLSSTEAEYVALAERMKEAIFLRYLWNFILPDLDVGCTLVHEDNVGAVY
LASNPATTPNSKHIDIKHHFIRERVARGEFRVVHARPALQRADFLTKALP
KDAFCAHRDFVMNIRWFVRVALFALSF*
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