mRNA_P-littoralis_Contig166.10.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig166.10.1
Unique NamemRNA_P-littoralis_Contig166.10.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig166.10.1 vs. uniprot
Match: A0A6H5JWG1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWG1_9PHAE)

HSP 1 Score: 376 bits (966), Expect = 5.320e-125
Identity = 184/221 (83.26%), Postives = 201/221 (90.95%), Query Frame = 1
Query:    1 RSLVGHMMWLANETRPDILNAVRAVARYSHALKLVHWRAALHVLMYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLPRTQKSVTLSSTEAEYVALAERMKEAIFLRYLWNFILPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHARPALQRADFLTKALPKDAFCAHRDFVMNIR 663
            RSLVGH+MWLAN+TRPDILNAVRAVARYSHA K +HW AALHVLMYVR T+ +GITFQRG  GG+HMELFVDSDFA+KATDRRSVSGA+VMFAGAC+MYL RTQKSVTLSSTEAEYVA+++ MKEAIFLRYLW FI P  DVGCT V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARGEF+VVH R  LQRADFLTK LPK+ FCAHRDFVMNIR
Sbjct:  356 RSLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTSGYGITFQRGTVGGDHMELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 576          
BLAST of mRNA_P-littoralis_Contig166.10.1 vs. uniprot
Match: A0A6H5KGK7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGK7_9PHAE)

HSP 1 Score: 376 bits (966), Expect = 2.380e-122
Identity = 184/221 (83.26%), Postives = 201/221 (90.95%), Query Frame = 1
Query:    1 RSLVGHMMWLANETRPDILNAVRAVARYSHALKLVHWRAALHVLMYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLPRTQKSVTLSSTEAEYVALAERMKEAIFLRYLWNFILPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHARPALQRADFLTKALPKDAFCAHRDFVMNIR 663
            RSLVGH+MWLAN+TRPDILNAVRAVARYSHA K +HW AALHVLMYVR T+ +GITFQRG  GG+HMELFVDSDFA+KATDRRSVSGA+VMFAGAC+MYL RTQKSVTLSSTEAEYVA+++ MKEAIFLRYLW FI P  DVGCT V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARGEF+VVH R  LQRADFLTK LPK+ FCAHRDFVMNIR
Sbjct:  580 RSLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTSGYGITFQRGTVGGDHMELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 800          
BLAST of mRNA_P-littoralis_Contig166.10.1 vs. uniprot
Match: A0A6H5K5L3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5L3_9PHAE)

HSP 1 Score: 366 bits (939), Expect = 4.280e-121
Identity = 181/221 (81.90%), Postives = 197/221 (89.14%), Query Frame = 1
Query:    1 RSLVGHMMWLANETRPDILNAVRAVARYSHALKLVHWRAALHVLMYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLPRTQKSVTLSSTEAEYVALAERMKEAIFLRYLWNFILPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHARPALQRADFLTKALPKDAFCAHRDFVMNIR 663
            RSLVGH+MWLAN+TRPDILNAVRAVARYSHA K +HW AALHVLMYVR T+  GITFQRG  GG+HMEL VDSDFA+KATDRRSVSGA+VMFAGAC+MYL RTQKSVTLSSTEAEYVA+++ M EAIFLRYLW  I   LDVGCT V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARGEF+VVH R  LQRADFLTK LPK+ FCAHRDFVMNIR
Sbjct:  343 RSLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTSGCGITFQRGTVGGDHMELLVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMTEAIFLRYLWKIIFSVLDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 563          
BLAST of mRNA_P-littoralis_Contig166.10.1 vs. uniprot
Match: A0A6H5JMP2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP2_9PHAE)

HSP 1 Score: 368 bits (944), Expect = 2.550e-116
Identity = 181/221 (81.90%), Postives = 198/221 (89.59%), Query Frame = 1
Query:    1 RSLVGHMMWLANETRPDILNAVRAVARYSHALKLVHWRAALHVLMYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLPRTQKSVTLSSTEAEYVALAERMKEAIFLRYLWNFILPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHARPALQRADFLTKALPKDAFCAHRDFVMNIR 663
            RSLVGH+MWLAN+TRPDILNAVRAVARYSHA K +HW AALHVLMYVR T+ +GITFQRG  GG+HMELFVDSDFA+KATDRRSVSGA+VMFAGAC+MYL RTQKS TLSSTEAEYVA+++ MKEAIFLRYLW FI P  DVGCT V EDNVGA++LASNPATTPNSK IDI+HHFIRERVARG F+VVH R  LQRADFLTK LPK+ FCAHRDFVMNIR
Sbjct:  884 RSLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTSGYGITFQRGTVGGDHMELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSGTLSSTEAEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKQIDIRHHFIRERVARGGFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 1104          
BLAST of mRNA_P-littoralis_Contig166.10.1 vs. uniprot
Match: A0A6H5KAC2_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAC2_9PHAE)

HSP 1 Score: 376 bits (966), Expect = 2.820e-116
Identity = 184/221 (83.26%), Postives = 201/221 (90.95%), Query Frame = 1
Query:    1 RSLVGHMMWLANETRPDILNAVRAVARYSHALKLVHWRAALHVLMYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLPRTQKSVTLSSTEAEYVALAERMKEAIFLRYLWNFILPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHARPALQRADFLTKALPKDAFCAHRDFVMNIR 663
            RSLVGH+MWLAN+TRPDILNAVRAVARYSHA K +HW AALHVLMYVR T+ +GITFQRG  GG+HMELFVDSDFA+KATDRRSVSGA+VMFAGAC+MYL RTQKSVTLSSTEAEYVA+++ MKEAIFLRYLW FI P  DVGCT V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARGEF+VVH R  LQRADFLTK LPK+ FCAHRDFVMNIR
Sbjct: 1656 RSLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTSGYGITFQRGTVGGDHMELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 1876          
BLAST of mRNA_P-littoralis_Contig166.10.1 vs. uniprot
Match: A0A6H5KAQ1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAQ1_9PHAE)

HSP 1 Score: 361 bits (927), Expect = 1.010e-114
Identity = 177/220 (80.45%), Postives = 197/220 (89.55%), Query Frame = 1
Query:    1 RSLVGHMMWLANETRPDILNAVRAVARYSHALKLVHWRAALHVLMYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLPRTQKSVTLSSTEAEYVALAERMKEAIFLRYLWNFILPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHARPALQRADFLTKALPKDAFCAHRDFVMNI 660
            R LVGH+MWLAN+TRPDILNAVRAVARYSHA K +HW AALHVLM+VR T+ +GITFQRG  GG+HMELFVDSDFA+KATDRRSVSGA+VMFAGAC+MYL RTQKSVTLSSTEAEYVA+++ MKEAIFLR+LW F+ P  DVGCT V EDNVGA +LAS  A+TPNSKHIDI+HHFIRERVARGEF+VVHAR  LQRADFLTK LPK+ FCAHRDFVMNI
Sbjct:  772 RLLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMFVRFTSGYGITFQRGTVGGDHMELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRHLWKFVFPGRDVGCTPVWEDNVGAFHLASKSASTPNSKHIDIRHHFIRERVARGEFKVVHARSDLQRADFLTKPLPKETFCAHRDFVMNI 991          
BLAST of mRNA_P-littoralis_Contig166.10.1 vs. uniprot
Match: A0A6H5L5Q2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Q2_9PHAE)

HSP 1 Score: 340 bits (871), Expect = 8.690e-114
Identity = 162/220 (73.64%), Postives = 193/220 (87.73%), Query Frame = 1
Query:    1 RSLVGHMMWLANETRPDILNAVRAVARYSHALKLVHWRAALHVLMYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLPRTQKSVTLSSTEAEYVALAERMKEAIFLRYLWNFILPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHARPALQRADFLTKALPKDAFCAHRDFVMNI 660
            RSLVGH+MWLAN+TRPDILNAVRAVARYS+A K VHW+AALH++MY+R T+ +GITFQRG  GG  +E++VDSD+ASKATDRRSVSG VVM AG+C+ +  RTQKSVTLSSTEAEY A+A+ MKEAIFLRYLW+FI PD DVGCT++ EDNVGA++LA+NPATTPNSKHID++HHFIRERV RGEF+VV+    LQ ADFLTK LPK+AF  HR+FVMN+
Sbjct:  126 RSLVGHLMWLANQTRPDILNAVRAVARYSYAPKSVHWKAALHIVMYIRCTSAYGITFQRGTAGGVSLEVYVDSDYASKATDRRSVSGGVVMCAGSCVSFFSRTQKSVTLSSTEAEYAAMADGMKEAIFLRYLWSFIFPDGDVGCTVIKEDNVGALHLANNPATTPNSKHIDVRHHFIRERVDRGEFKVVYVPSHLQHADFLTKPLPKEAFSVHRNFVMNL 345          
BLAST of mRNA_P-littoralis_Contig166.10.1 vs. uniprot
Match: A0A6H5KPR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPR3_9PHAE)

HSP 1 Score: 331 bits (848), Expect = 6.580e-112
Identity = 164/203 (80.79%), Postives = 180/203 (88.67%), Query Frame = 1
Query:    1 RSLVGHMMWLANETRPDILNAVRAVARYSHALKLVHWRAALHVLMYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLPRTQKSVTLSSTEAEYVALAERMKEAIFLRYLWNFILPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHARPALQRADFLTK 609
            RSLVGH+MWLAN+TRPDILNAVRAVARYSHA K +HW AALHVLMYVR T+ +GITFQRG  GG+HMEL VDSDFA+KATDRRSVSGA+VM AGAC+MYL R QKSVTLSSTEAEY+A+ + MKEAIFLRYLW FI P  DVGCT V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARGEF+VVH    LQRADFLTK
Sbjct:   22 RSLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTSGYGITFQRGTVGGDHMELLVDSDFANKATDRRSVSGALVMIAGACVMYLCRMQKSVTLSSTEAEYMAMFDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVPSDLQRADFLTK 224          
BLAST of mRNA_P-littoralis_Contig166.10.1 vs. uniprot
Match: A0A6H5JCD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCD8_9PHAE)

HSP 1 Score: 335 bits (859), Expect = 6.600e-104
Identity = 161/220 (73.18%), Postives = 191/220 (86.82%), Query Frame = 1
Query:    1 RSLVGHMMWLANETRPDILNAVRAVARYSHALKLVHWRAALHVLMYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLPRTQKSVTLSSTEAEYVALAERMKEAIFLRYLWNFILPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHARPALQRADFLTKALPKDAFCAHRDFVMNI 660
            RSLVGH+MWLAN+TRPDILNAVRAVARYS+A K VHW+AALH++MY+R T  +GIT QRG  GG  +E++VDSD+ASKATDRRSVSG VVM AG+C+ +  RTQKSVTLSSTEAEY A+A+ MKEAIFLRYLW+FI PD DVGCT++ EDNVGA++LA+NPATTPNSKHID++HHFIRERV RGEF+VV+    LQ ADFLTK LPK+AF  HR+FVMN+
Sbjct:  894 RSLVGHLMWLANQTRPDILNAVRAVARYSYAPKSVHWKAALHMVMYIRCTRAYGITLQRGTAGGVSLEVYVDSDYASKATDRRSVSGGVVMCAGSCVSFFSRTQKSVTLSSTEAEYAAMADGMKEAIFLRYLWSFISPDGDVGCTVIKEDNVGALHLANNPATTPNSKHIDVRHHFIRERVDRGEFKVVYVPSHLQHADFLTKPLPKEAFSVHRNFVMNL 1113          
BLAST of mRNA_P-littoralis_Contig166.10.1 vs. uniprot
Match: A0A6H5JHE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHE6_9PHAE)

HSP 1 Score: 301 bits (771), Expect = 2.880e-99
Identity = 153/197 (77.66%), Postives = 166/197 (84.26%), Query Frame = 1
Query:    1 RSLVGHMMWLANETRPDILNAVRAVARYSHALKLVHWRAALHVLMYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLPRTQKSVTLSSTEAE-------------YVALAERMKEAIFLRYLWNFILPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARG 552
            RSLVGH+MWLAN+TRPDILNAVRAVARYSHA K +HW AALHVLMYVR T   GITFQRG  GG+HMELFVDSDFA+KATDRRSVSGA+VMFAGAC+MYL RTQKSVTLSSTEAE             YVA+++ MKEAIFLRYLW FI P  DVGCT V EDNVGA++LASNPATTPNSKHIDI+HHFI ERVARG
Sbjct:  101 RSLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTRGNGITFQRGTEGGDHMELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEXXXXXXXXXXXXEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIHERVARG 297          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig166.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWG1_9PHAE5.320e-12583.26Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KGK7_9PHAE2.380e-12283.26Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K5L3_9PHAE4.280e-12181.90Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JMP2_9PHAE2.550e-11681.90Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KAC2_9PHAE2.820e-11683.26Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5KAQ1_9PHAE1.010e-11480.45Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L5Q2_9PHAE8.690e-11473.64Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KPR3_9PHAE6.580e-11280.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCD8_9PHAE6.600e-10473.18Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JHE6_9PHAE2.880e-9977.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig166contigP-littoralis_Contig166:88668..89482 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog36914.XP_001526365.1
PFAMsRVT_2,Retrotran_gag_2,gag_pre-integrs,rve,zf-CCHC
Model size815
Max annot lvl4751|Fungi
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.44e-41
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,38DPC@33154|Opisthokonta,3NUZ7@4751|Fungi,3QNZW@4890|Ascomycota,3RTT4@4891|Saccharomycetes,47E39@766764|Debaryomycetaceae
DescriptionTransposable element
Cds size684
COG categoryL
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789801.7694101-UTR-P-littoralis_Contig166:88667..886851680789801.7694101-UTR-P-littoralis_Contig166:88667..88685Pylaiella littoralis U1_48UTRP-littoralis_Contig166 88668..88685 +
1680789801.7906475-UTR-P-littoralis_Contig166:89369..894821680789801.7906475-UTR-P-littoralis_Contig166:89369..89482Pylaiella littoralis U1_48UTRP-littoralis_Contig166 89370..89482 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789801.781615-CDS-P-littoralis_Contig166:88685..893691680789801.781615-CDS-P-littoralis_Contig166:88685..89369Pylaiella littoralis U1_48CDSP-littoralis_Contig166 88686..89369 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig166.10.1prot_P-littoralis_Contig166.10.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig166 88686..89369 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig166.10.1

>prot_P-littoralis_Contig166.10.1 ID=prot_P-littoralis_Contig166.10.1|Name=mRNA_P-littoralis_Contig166.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=228bp
MMWLANETRPDILNAVRAVARYSHALKLVHWRAALHVLMYVRGTTDFGIT
FQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLPRTQKS
VTLSSTEAEYVALAERMKEAIFLRYLWNFILPDLDVGCTLVHEDNVGAVY
LASNPATTPNSKHIDIKHHFIRERVARGEFRVVHARPALQRADFLTKALP
KDAFCAHRDFVMNIRWFVRVALFALSF*
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mRNA from alignment at P-littoralis_Contig166:88668..89482+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig166.10.1 ID=mRNA_P-littoralis_Contig166.10.1|Name=mRNA_P-littoralis_Contig166.10.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=815bp|location=Sequence derived from alignment at P-littoralis_Contig166:88668..89482+ (Pylaiella littoralis U1_48)
CGGTCGTTGGTGGGGCACATGATGTGGCTGGCGAATGAGACTCGTCCGGA TATTCTCAACGCGGTGCGGGCCGTGGCGAGGTATTCTCACGCGCTGAAGC TGGTGCATTGGCGGGCGGCGTTGCATGTCTTGATGTATGTTCGGGGAACC ACTGATTTCGGCATCACTTTTCAGAGAGGTGTACCAGGAGGAGAGCACAT GGAGCTTTTTGTCGATTCGGATTTCGCCAGCAAGGCAACCGACCGGCGGT CTGTTTCTGGTGCGGTGGTGATGTTTGCTGGTGCATGTTTGATGTATTTG CCTAGGACGCAAAAGAGCGTCACACTCTCGTCGACGGAGGCGGAGTACGT AGCCCTAGCTGAAAGGATGAAGGAGGCGATTTTCTTGCGGTATCTCTGGA ATTTTATCCTTCCGGACCTCGATGTAGGGTGCACTTTGGTCCACGAGGAC AACGTCGGGGCCGTTTACCTGGCAAGCAATCCGGCCACAACCCCCAACTC AAAGCACATCGACATCAAGCACCATTTCATTCGCGAACGCGTGGCACGGG GGGAGTTCAGGGTAGTTCACGCACGTCCTGCTTTGCAGCGTGCTGATTTC TTGACCAAAGCACTGCCCAAAGACGCTTTTTGCGCGCACCGTGACTTTGT GATGAACATTCGGTGGTTTGTGCGTGTTGCGTTGTTCGCCCTGAGTTTCT AGCCGTTCTGCGGCTATCGTCTCTGTTTTTGGCACCGCAGCATGTATGTT GCTTTTCTCTGTTTAAAATCACGGGGGGGGGGAATATTGTGCCATGATTT TATGTTTTCGTTTTT
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Coding sequence (CDS) from alignment at P-littoralis_Contig166:88668..89482+

>mRNA_P-littoralis_Contig166.10.1 ID=mRNA_P-littoralis_Contig166.10.1|Name=mRNA_P-littoralis_Contig166.10.1|organism=Pylaiella littoralis U1_48|type=CDS|length=684bp|location=Sequence derived from alignment at P-littoralis_Contig166:88668..89482+ (Pylaiella littoralis U1_48)
ATGATGTGGCTGGCGAATGAGACTCGTCCGGATATTCTCAACGCGGTGCG
GGCCGTGGCGAGGTATTCTCACGCGCTGAAGCTGGTGCATTGGCGGGCGG
CGTTGCATGTCTTGATGTATGTTCGGGGAACCACTGATTTCGGCATCACT
TTTCAGAGAGGTGTACCAGGAGGAGAGCACATGGAGCTTTTTGTCGATTC
GGATTTCGCCAGCAAGGCAACCGACCGGCGGTCTGTTTCTGGTGCGGTGG
TGATGTTTGCTGGTGCATGTTTGATGTATTTGCCTAGGACGCAAAAGAGC
GTCACACTCTCGTCGACGGAGGCGGAGTACGTAGCCCTAGCTGAAAGGAT
GAAGGAGGCGATTTTCTTGCGGTATCTCTGGAATTTTATCCTTCCGGACC
TCGATGTAGGGTGCACTTTGGTCCACGAGGACAACGTCGGGGCCGTTTAC
CTGGCAAGCAATCCGGCCACAACCCCCAACTCAAAGCACATCGACATCAA
GCACCATTTCATTCGCGAACGCGTGGCACGGGGGGAGTTCAGGGTAGTTC
ACGCACGTCCTGCTTTGCAGCGTGCTGATTTCTTGACCAAAGCACTGCCC
AAAGACGCTTTTTGCGCGCACCGTGACTTTGTGATGAACATTCGGTGGTT
TGTGCGTGTTGCGTTGTTCGCCCTGAGTTTCTAG
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