prot_P-littoralis_Contig142.2.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig142.2.1
Unique Nameprot_P-littoralis_Contig142.2.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length184
Homology
BLAST of mRNA_P-littoralis_Contig142.2.1 vs. uniprot
Match: A0A6H5L4L9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4L9_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 2.580e-14
Identity = 57/174 (32.76%), Postives = 82/174 (47.13%), Query Frame = 0
Query:    8 PLAFAPIPSIHCTTRCNTNSCTSSITMNPAAVNRRQLFQDVRALPLSSTRAHARQDALDLDDRETDRQRSLRIGQQIDKIRQNDLEGFHGVE-PCSPEMFSQFVASLRNVTNDVLTLSDSEREQSILSERWAPGWSHHLRKRVRNGI-RNPTANADTPSLVDDVFQQAAQHSLK 179
            PL  +P      +   + NS T  I + P       L QD   LPL+STRA ARQ+ALD  D        +RI  ++DK++    +    +     P+ F++F +S + V  ++L  SD +R+Q+  S  W  GW   LRKRVR  +    T N  T   +D  F Q   H  K
Sbjct:  160 PLVVSPHSLQRASVLIDPNSATGHI-VEPPGQAASPLPQDDAGLPLTSTRARARQEALDAADAAATEADIIRIQDKMDKLKPEQRDSIIRLPLGPDPDEFARFASSCKGVVTEILNKSDVKRKQTFNSSTWVTGWLPLLRKRVRAAVVEGQTTNRATLEFLDATFLQVENHLRK 332          
BLAST of mRNA_P-littoralis_Contig142.2.1 vs. uniprot
Match: A0A6H5KHE6_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE6_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 3.710e-14
Identity = 56/176 (31.82%), Postives = 86/176 (48.86%), Query Frame = 0
Query:    6 KPPLAFAPIPSIHCTTRCNTNSCTSSITMNPAAVNRRQLFQDVRALPLSSTRAHARQDALDLDDRETDRQRSLRIGQQIDKIRQNDLEGFHGVE-PCSPEMFSQFVASLRNVTNDVLTLSDSEREQSILSERWAPGWSHHLRKRVRNGI-RNPTANADTPSLVDDVFQQAAQHSLK 179
            +P L  +P+P    +   + +S T  I + P +     + QD   LPLSST A ARQ+AL   D       ++RI  ++DK++   L+    +     P+ F++F +S + V  ++L  SD +R+Q+  S  W  GW   LRKRVR  +    T N  T   +D  F Q   H  K
Sbjct:  699 QPSLVVSPLPLQRASVLSDPDSATGHI-VEPPSQAASPVPQDDAGLPLSSTGARARQEALHAADAAAAEADTIRIQDKMDKLKPERLDSVTRLPLGPDPDEFARFASSCKGVVTEILNKSDVKRKQTFNSSTWVTGWLPLLRKRVRAAVVEGQTTNRATLEFLDATFLQVENHLRK 873          
BLAST of mRNA_P-littoralis_Contig142.2.1 vs. uniprot
Match: A0A6H5K8W4_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W4_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 6.620e-14
Identity = 56/174 (32.18%), Postives = 84/174 (48.28%), Query Frame = 0
Query:    8 PLAFAPIPSIHCTTRCNTNSCTSSITMNPAAVNRRQLFQDVRALPLSSTRAHARQDALDLDDRETDRQRSLRIGQQIDKIRQNDLEGFHGVE-PCSPEMFSQFVASLRNVTNDVLTLSDSEREQSILSERWAPGWSHHLRKRVRNGI-RNPTANADTPSLVDDVFQQAAQHSLK 179
            PL  +P P    +   + +S T  I + P +     + QD   LPLSST A ARQ+AL   D       ++RI  ++DK++   L+    +     P+ F++F +S + V  ++L  SD +R+Q+  S  W  GW   LRKRVR  +    T N  T   +D  F Q   H  K
Sbjct:   59 PLVVSPPPLQRASVLIDPDSATGHI-VEPPSQAASPVPQDDAGLPLSSTGARARQEALKAADAAAAEADTIRIQDKMDKLKPEQLDSVTRLPLGPDPDEFARFASSCKGVVTEILNKSDVKRKQTFNSSTWVTGWLPLLRKRVRAAVVEGQTTNRATLEFLDATFLQVENHLRK 231          
BLAST of mRNA_P-littoralis_Contig142.2.1 vs. uniprot
Match: A0A6H5KQN2_9PHAE (NADAR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQN2_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 3.850e-11
Identity = 52/161 (32.30%), Postives = 79/161 (49.07%), Query Frame = 0
Query:    8 PLAFAPIPSIHCTTRCNTNSCTSSITMNPAAVNRRQLFQDVRALPLSSTRAHARQDALDLDDRETDRQRSLRIGQQIDKIRQNDLEGFHGVE-PCSPEMFSQFVASLRNVTNDVLTLSDSEREQSILSERWAPGWSHHLRKRVRNGI-RNPTANADTPSLV 166
            PL  +P P        + NS T   ++ P +     L QD   LPLSST A ARQ+AL   D       ++RI  ++DK++   L+    +     P+ F++F +S + V  ++L  SD +R+Q+  S  W  GW   LRKRVR  +    T N  T  ++
Sbjct:   59 PLVVSPPPLQRAFVLIDPNSATGH-SVEPPSQAASPLPQDDAGLPLSSTGARARQEALHAADAAAAEADTIRIQDKMDKLKPEQLDSVTRLPLGPDPDEFARFASSCKGVVTEILNKSDVKRKQTFNSSTWVTGWLPLLRKRVRAAVVEGQTTNRATLEIL 218          
BLAST of mRNA_P-littoralis_Contig142.2.1 vs. uniprot
Match: A0A6H5KYW7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYW7_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 2.380e-5
Identity = 34/96 (35.42%), Postives = 51/96 (53.12%), Query Frame = 0
Query:   47 DVRALPLSSTRAHARQDALDLDDRETDRQRSLRIGQQIDKIRQNDLEGFHGVE-PCSPEMFSQFVASLRNVTNDVLTLSDSEREQSILSERWAPGW 141
            D   LPLSST A ARQ+ALD  D       ++RI  ++DK++   L+    +     P+ FS+F  S + V  ++L  SD +R+Q+  S     GW
Sbjct:  279 DDAGLPLSSTGARARQEALDAADAAAAEADTIRIQDKMDKLKPEQLDSVTRLPLGPDPDEFSRFAPSCKGVVTEILKKSDVKRKQTFKSSTSVTGW 374          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig142.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L4L9_9PHAE2.580e-1432.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHE6_9PHAE3.710e-1431.82Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5K8W4_9PHAE6.620e-1432.18Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KQN2_9PHAE3.850e-1132.30NADAR domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KYW7_9PHAE2.380e-535.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig142contigP-littoralis_Contig142:8956..9507 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig142.2.1mRNA_P-littoralis_Contig142.2.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig142 8956..10200 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig142.2.1 ID=prot_P-littoralis_Contig142.2.1|Name=mRNA_P-littoralis_Contig142.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=184bp
MNLCRKPPLAFAPIPSIHCTTRCNTNSCTSSITMNPAAVNRRQLFQDVRA
LPLSSTRAHARQDALDLDDRETDRQRSLRIGQQIDKIRQNDLEGFHGVEP
CSPEMFSQFVASLRNVTNDVLTLSDSEREQSILSERWAPGWSHHLRKRVR
NGIRNPTANADTPSLVDDVFQQAAQHSLKPGNFG
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