prot_P-littoralis_Contig142.140.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig142.140.1
Unique Nameprot_P-littoralis_Contig142.140.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length54
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig142.140.1 vs. uniprot
Match: D8LTZ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTZ0_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 3.430e-8
Identity = 31/42 (73.81%), Postives = 34/42 (80.95%), Query Frame = 0 
Query:   12 DSWDDDSAQATRGARGGSRFSTVLVIVGTFSQVLWLVSRLIE 53
            D  DD+SA+   G  GGSRF+TVLVIVGTFSQVLWLV RLIE
Sbjct:  232 DGEDDNSARG--GCEGGSRFATVLVIVGTFSQVLWLVGRLIE 271
[Close]
BLAST of mRNA_P-littoralis_Contig142.140.1 vs. uniprot
Match: A0A6H5JS55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS55_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 1.030e-7
Identity = 31/42 (73.81%), Postives = 34/42 (80.95%), Query Frame = 0 
Query:   12 DSWDDDSAQATRGARGGSRFSTVLVIVGTFSQVLWLVSRLIE 53
            D  DD+SA+   G  GGSRF+TVLVIVGTFSQVLWLV RLIE
Sbjct:  275 DGEDDNSARG--GGVGGSRFATVLVIVGTFSQVLWLVGRLIE 314
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig142.140.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTZ0_ECTSI3.430e-873.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JS55_9PHAE1.030e-773.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig142contigP-littoralis_Contig142:430633..430794 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig142.140.1mRNA_P-littoralis_Contig142.140.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig142 430477..431747 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig142.140.1 ID=prot_P-littoralis_Contig142.140.1|Name=mRNA_P-littoralis_Contig142.140.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=54bp
MEVNPRKKGGQDSWDDDSAQATRGARGGSRFSTVLVIVGTFSQVLWLVSR
LIE*
back to top