prot_P-littoralis_Contig142.127.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig142.127.2
Unique Nameprot_P-littoralis_Contig142.127.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length72
Homology
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BLAST of mRNA_P-littoralis_Contig142.127.2 vs. uniprot
Match: A0A6H5JSB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSB0_9PHAE)

HSP 1 Score: 50.8 bits (120), Expect = 1.890e-6
Identity = 28/63 (44.44%), Postives = 34/63 (53.97%), Query Frame = 0 
Query:    1 MFGAGRGFRGFRPRNSTSQGVHLGILTVIGVTS------EASTSVYARADAVPLGEKVKVKRG 57
            MFG  RGFRGFRPRNST Q +H+  LTV+GV +      E   +  A   A   GE+     G
Sbjct:    1 MFGRSRGFRGFRPRNSTHQALHVATLTVVGVVTGYYIFNEPLKTAVAEVKAKEAGERAAAGGG 63
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig142.127.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JSB0_9PHAE1.890e-644.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig142contigP-littoralis_Contig142:406781..407724 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig142.127.2mRNA_P-littoralis_Contig142.127.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig142 406639..407724 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig142.127.2 ID=prot_P-littoralis_Contig142.127.2|Name=mRNA_P-littoralis_Contig142.127.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=72bp
MFGAGRGFRGFRPRNSTSQGVHLGILTVIGVTSEASTSVYARADAVPLGE
KVKVKRGACRLPNHVPGYNGA*
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