prot_P-littoralis_Contig142.110.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig142.110.1
Unique Nameprot_P-littoralis_Contig142.110.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length530
Homology
BLAST of mRNA_P-littoralis_Contig142.110.1 vs. uniprot
Match: D8LTY2_ECTSI (Signal recognition particle 54 kDa protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTY2_ECTSI)

HSP 1 Score: 886 bits (2289), Expect = 0.000e+0
Identity = 461/499 (92.38%), Postives = 485/499 (97.19%), Query Frame = 0
Query:    1 MVLQELGSKLTSALRRLHTDTVVDKETIKAVVGDICRALLESDVNVQMVMKLRKSIEAKADSLVADQQDGSGRGGAGGVGAAQQRRSIQKAVVDELTGMLDPKTAPYKMKKGKSNVVMFVGLQGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFREEKYEVVIIVDTSGRHKQEEALFDEMKEIQEAVQPDNTTLIMDATQGQAVYDQAQAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMRGLAQQIQESQEGAVDPKEMMERMS-KGQFTLRDLYKQLQGAMKLGPMGKVMGMIPGMGEMAQMANNSSTQGMFKKNLYMMDSMTDDELDGKVDLSKCESRVLRIARGSGTHPDEVRGLLKLHKHFEKVFGKFGKNMKGEASKVKQLQRNPALAKQHLNQMDPKVVESLGGRAKVLEIIKNGGAG 498
            MVLQELGSKLTSALRRLHTDTVVD+ET+KAVVGDICRALLESDVNVQMVMKLRK++EAKA+SLVA+QQDG   G  GGVGAAQQRRSIQKAVVDELTGMLDPKTAPYKM+KG+SNVVMFVGLQGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQF++EKYEV IIVDTSGRHKQE+ALFDEMKEIQEAVQPDNTTLIMDATQGQAV+DQA+AFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDM+GL +QIQESQEG+ DPKEMMER+S KG+FTLRDLYKQL  AMKLGPM KVMGMIPGMGEMAQMANNS+TQGMFKKNLY+MDSMTDDELDGKVDLS+CESR+LRIARGSGTHPD+VRGLLKLHKHFEKVFGK GKNMKG+ASK KQLQRNPALAKQHLNQMDPKVVESLGGRAKVLEIIKNGGAG
Sbjct:    1 MVLQELGSKLTSALRRLHTDTVVDRETVKAVVGDICRALLESDVNVQMVMKLRKNVEAKAESLVAEQQDG---GAGGGVGAAQQRRSIQKAVVDELTGMLDPKTAPYKMRKGRSNVVMFVGLQGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFKQEKYEV-IIVDTSGRHKQEDALFDEMKEIQEAVQPDNTTLIMDATQGQAVFDQAKAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMKGLMRQIQESQEGSGDPKEMMERISNKGKFTLRDLYKQLSSAMKLGPMNKVMGMIPGMGEMAQMANNSTTQGMFKKNLYIMDSMTDDELDGKVDLSQCESRLLRIARGSGTHPDQVRGLLKLHKHFEKVFGKVGKNMKGDASKAKQLQRNPALAKQHLNQMDPKVVESLGGRAKVLEIIKNGGAG 495          
BLAST of mRNA_P-littoralis_Contig142.110.1 vs. uniprot
Match: A0A835YYR6_9STRA (Signal recognition particle 54 kDa protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYR6_9STRA)

HSP 1 Score: 576 bits (1484), Expect = 1.170e-199
Identity = 321/536 (59.89%), Postives = 403/536 (75.19%), Query Frame = 0
Query:    1 MVLQELGSKLTSALRRLHTDTVVDKETIKAVVGDICRALLESDVNVQMVMKLRKSIEAKADSLVADQQDGSGRGGAGGVGAAQQRRSIQKAVVDELTGMLDPKTAPYKMKKGKSNVVMFVGLQGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFREEKYEVVIIVDTSGRHKQEEALFDEMKEIQEAVQPDNTTLIMDATQGQAVYDQAQAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMRGLAQQIQESQEGAVDPKEMMERMSKGQFTLRDLYKQLQGAMKLGPMGKVMG-MIPGMGEMAQMANNSSTQGMFKKNLYMMDSMTDDELDGKVDLSKCESRVLRIARGSGTHPDEVRGLLKLHKHFEKVFGKFGKNMK-------GEASKVKQLQRNP---ALAKQHLNQMDPKVVESLGGRAKVLEIIKN-GGAGAGAXXXXXXXXXXXAMLGGGMPGAAG 524
            MVLQELG KL++ALR+L + TVVD+E +KA++ +I RALLESDVN+++VM+L+K++EAK +      +D SG         A ++R IQ+AV++EL  MLDPKT PY+MKKG SNV+MFVGLQG+GKTTTIAKFAHY+QRKGW+VAMVCADTFRAGAFDQLKQNATKLR PFYGSY+EADPVRIA+EGV+QFR++++EV IIVDTSGRHKQE+ALF+EM+EIQ AVQPDN   +MDATQGQAV DQA+AFHEAV VGSV+ITKLDGHAKGGGA+SAVAAT SPITFLG GEHFDDLE F A SFVS++LGFGD   L +++Q++ +  +DPK+MM+RM+KGQFTLRD Y+Q+QG +KLGP+ K+MG M+PG+ + AQ           K+ LYMMDSM DDELDGKVD++  E RV RIARGSGT  +EV+ LL+ HK  EKV  + GK+           A+K+ QL +NP   A        M P++++ +GGR  V + ++  GG    A             +GGG  GA G
Sbjct:    1 MVLQELGGKLSAALRKLQSTTVVDEEVVKAIITEITRALLESDVNIKVVMELKKNVEAKINRS----EDASG---------ASKKRLIQQAVMEELVAMLDPKTPPYQMKKGASNVIMFVGLQGSGKTTTIAKFAHYYQRKGWRVAMVCADTFRAGAFDQLKQNATKLRVPFYGSYTEADPVRIAEEGVEQFRKDRFEV-IIVDTSGRHKQEDALFEEMREIQAAVQPDNCVFVMDATQGQAVADQARAFHEAVPVGSVVITKLDGHAKGGGAMSAVAATKSPITFLGSGEHFDDLEPFVASSFVSKMLGFGDFGSLLRELQDTNDPGMDPKKMMDRMTKGQFTLRDFYQQIQGVLKLGPLNKMMGGMMPGIPDTAQQ----------KRFLYMMDSMRDDELDGKVDIAGNEKRVTRIARGSGTRVEEVQLLLRQHKAREKVVAQMGKSGMMNAATDPAMAAKMAQLMQNPNSRASQAAMSKMMSPQMLKQMGGRDGVAKRMREMGGMPGMAGGGGMDMASMMQAMGGGGAGAGG 512          
BLAST of mRNA_P-littoralis_Contig142.110.1 vs. uniprot
Match: A0A4D9CXS1_9STRA (Signal recognition particle 54 kDa protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXS1_9STRA)

HSP 1 Score: 558 bits (1438), Expect = 7.160e-192
Identity = 306/513 (59.65%), Postives = 383/513 (74.66%), Query Frame = 0
Query:    1 MVLQELGSKLTSALRRLHTDTVVDKETIKAVVGDICRALLESDVNVQMVMKLRKSIEAKADSLVADQQDGSGRGGAGGVGAAQQRRSIQKAVVDELTGMLDPKTAPYKMKKGKSNVVMFVGLQGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFREEKYEVVIIVDTSGRHKQEEALFDEMKEIQEAVQPDNTTLIMDATQGQAVYDQAQAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMRGLAQQIQE--SQEGAVDPKEMM-ERMSKGQFTLRDLYKQLQGAMKLGPMGKVMGMIPGM-------GEMAQMANNSSTQGMFKKNLYMMDSMTDDELDGKVDLSKCESRVLRIARGSGTHPDEVRGLLKLHKHFEKVFGKFGKNMK--GEASKVKQLQRNPALAKQHLNQ-MDPKVVESLGGRAKVLEIIKNGGAGAG 500
            MVLQELG KLT ALRRL T TVV+ + +  ++ D+CRAL+ESDVN+++V  LRK I+ K +  +AD   G  R           R+ +Q+AV++EL  ++D  T PY+MKKGKSNV+MFVGLQG+GKTTTIAK+A+Y+QRKGWK  MVCADTFRAGAFDQLKQNATKLR PFYGSY+EADPVRIA+EGVQQFR E YEV IIVDTSGRHKQEEALF+EMKEIQ AV+PDN   +MDATQGQAV+DQAQ FH+A  VGSVI+TKLDGHAKGGGALSAVAAT +PI FLG GEHFDDL+ F+  SF+SRLLG GDMRG  +++    ++EG  + +E M +R+ KGQFTLRD+Y+Q +  MKLGP+ KVMGM+PG        GE  +   + +  G  K+ L MMDSMTD ELDGKVDL+K ESRV RIARGSG HP EV+ LLK +  F ++F K G  M   GE    +Q+ RNP      L++ +DP++++ +GG   +++++K  G G+G
Sbjct:    1 MVLQELGDKLTGALRRLQTTTVVNDDVLNDLLQDVCRALVESDVNIKVVATLRKGIKEKVN--LADAPAGLNR-----------RKMVQRAVMEELVRLVDSGTKPYQMKKGKSNVIMFVGLQGSGKTTTIAKYANYYQRKGWKTCMVCADTFRAGAFDQLKQNATKLRVPFYGSYTEADPVRIAEEGVQQFRSEGYEV-IIVDTSGRHKQEEALFEEMKEIQAAVRPDNVVYVMDATQGQAVFDQAQGFHQAATVGSVIVTKLDGHAKGGGALSAVAATGAPIIFLGSGEHFDDLDVFNPGSFISRLLGLGDMRGFLEEVSSLGAREGGKERQEAMAQRLVKGQFTLRDMYEQFENVMKLGPLSKVMGMLPGFPSFLMGGGEGGRGGQDEAATGRLKRFLTMMDSMTDAELDGKVDLNKSESRVNRIARGSGAHPMEVQFLLKTYAQFSQMFKKMGPMMLKGGEGGIQRQMARNPGGVMNQLSKAVDPRMLQQMGGAKGMMDMMKAMGGGSG 499          
BLAST of mRNA_P-littoralis_Contig142.110.1 vs. uniprot
Match: F0Y473_AURAN (Signal recognition particle 54 kDa protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y473_AURAN)

HSP 1 Score: 553 bits (1426), Expect = 1.620e-191
Identity = 299/497 (60.16%), Postives = 383/497 (77.06%), Query Frame = 0
Query:    1 MVLQELGSKLTSALRRLHTDTVVDKETIKAVVGDICRALLESDVNVQMVMKLRKSIEAKADSLVADQQDGSGRGGAGGVGAAQQRRSIQKAVVDELTGMLDPKTAPYKMKKGKSNVVMFVGLQGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFREEKYEVVIIVDTSGRHKQEEALFDEMKEIQEAVQPDNTTLIMDATQGQAVYDQAQAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMRGLAQQIQESQEGAVDPKEMMERMSKGQFTLRDLYKQLQGAMKLGPMGKVMGMIPGMGEMAQMANNSSTQGMFKKNLYMMDSMTDDELDGKVDLSKCESRVLRIARGSGTHPDEVRGLLKLHKHFEKVFGKFGKN--MKG-EASKVKQLQRNPALAKQHLNQ-MDPKVVESLGGRAKVLEIIK 493
            MVLQELGSKLT+AL ++ + TV+ +E +  ++ DI  ALLE+DVNV++VM+LRK+I+ +A+  + ++  G+ R           R+ IQKAVV+EL GMLDP    ++MKKG  NV+MFVGLQGAGKTTTIAKFA+++ RKG+K  MVCADTFRAGA+DQL+QNATKLRCPFYGSY+EADPVRIA EGV QF+ EKYEV IIVDTSGRHKQE ALF+EM+EI+ A++P N   ++DATQGQAV++QA +FHEA+ +GSV+ITKLDGHAKGGGALSAVAAT +PI FLG GEHFDD E F+A SFVSRLLG GDMRGL +QI+++      P E+ME+ SKGQFTLRD+Y+Q +  MKLGP+ KVM MIPG+  M     + S   + K+ +YMMDSMTDDELD KVDL+K  SR+ R+ARGSG HP EV+ LLK HK FE V  K GK+  MKG +A+  KQ+QRNP    Q L++ MDP++++ +GG   ++ +++
Sbjct:    1 MVLQELGSKLTAALHKMQSVTVISEEVLDKMLKDIAAALLEADVNVRVVMELRKAIKTRAN--LEEESAGTNR-----------RKMIQKAVVEELAGMLDPGVKAHEMKKGSPNVIMFVGLQGAGKTTTIAKFANHYLRKGFKCCMVCADTFRAGAYDQLRQNATKLRCPFYGSYTEADPVRIAQEGVDQFKAEKYEV-IIVDTSGRHKQETALFEEMQEIRAAIEPQNVIFVLDATQGQAVHEQASSFHEAIDIGSVVITKLDGHAKGGGALSAVAATGAPILFLGSGEHFDDFEPFNAHSFVSRLLGMGDMRGLVEQIKDTIGDDKQP-ELMEKFSKGQFTLRDMYEQFENVMKLGPLSKVMAMIPGIPSMMGGEGDESNNRL-KRFMYMMDSMTDDELDAKVDLNKSASRIERVARGSGCHPMEVQMLLKCHKQFESVVSKMGKSGLMKGGDAAMAKQMQRNPNQVMQQLHKAMDPRMLQQMGGAQNLMSMMQ 481          
BLAST of mRNA_P-littoralis_Contig142.110.1 vs. uniprot
Match: A0A7S2WJL8_9STRA (Signal recognition particle 54 kDa protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJL8_9STRA)

HSP 1 Score: 551 bits (1419), Expect = 2.300e-190
Identity = 298/499 (59.72%), Postives = 381/499 (76.35%), Query Frame = 0
Query:    1 MVLQELGSKLTSALRRLHTDTVVDKETIKAVVGDICRALLESDVNVQMVMKLRKSIEAKADSLVADQQDGSGRGGAGGVGAAQQRRSIQKAVVDELTGMLDPKTAPYKMKKGKSNVVMFVGLQGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFREEKYEVVIIVDTSGRHKQEEALFDEMKEIQEAVQPDNTTLIMDATQGQAVYDQAQAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMRGLAQQIQESQEGAVDPKEMMERMSKGQFTLRDLYKQLQGAMKLGPMGKVMGMIPGM--GEMAQMANNSSTQGMFKKNLYMMDSMTDDELDGKVDLSKCESRVLRIARGSGTHPDEVRGLLKLHKHFEKVFGKFGKNMK---GEASKVKQLQRNPALAKQHLNQ-MDPKVVESLGGRAKVLEIIK 493
            MVLQELG KL  AL++LH  TVVD+E + A++ DI RALLE+DVNV++V +L++SI+ + +  + +   G+ R           RR IQKAV++EL  +L P   PY+MK+GK NV+MFVGLQG+GKTTTIAK+A+Y+ RKG+K  MVCADTFRAGA+DQLKQNATKLRCPFYGSY+EADPV+IA +GV+QF+ EKYEV IIVDTSGRHKQE  LF+EM+EI+ AV+PDN   I+DATQGQAV+DQA +FHEAV +GS +ITKLDGHAKGGGALSAVAAT +PITFLG GEHFDDLE F A+SFVSRLLG GDMRGL + I+E+     +P E+M++ +KG FTLRD+Y+Q Q  MKLGP+ KVM MIPG+  G M Q A +  +    K+ +YMMDSMTD ELDG+VDL K   R+ RI+RGSGTHP EV+ LL+ HK FE V  K GK+     G+A+  KQ+ RNP    Q +++ MDP++++ +GG   V++++K
Sbjct:    1 MVLQELGRKLEGALKKLHATTVVDEEVVTAMLNDIARALLEADVNVRVVGQLKQSIKMRVN--LEEAPSGNNR-----------RRMIQKAVMEELVAILQPDGEPYQMKRGKPNVIMFVGLQGSGKTTTIAKYANYYLRKGFKCCMVCADTFRAGAYDQLKQNATKLRCPFYGSYTEADPVQIAQDGVEQFKSEKYEV-IIVDTSGRHKQESVLFEEMQEIRAAVEPDNIVFILDATQGQAVHDQASSFHEAVDIGSCVITKLDGHAKGGGALSAVAATGAPITFLGSGEHFDDLEPFRAESFVSRLLGMGDMRGLVETIKETVGDDKNP-ELMDKFAKGVFTLRDMYEQFQNVMKLGPLSKVMSMIPGIPQGLMGQ-AGDQESSNRLKRFMYMMDSMTDAELDGQVDLEKSPGRIERISRGSGTHPMEVQQLLRTHKQFEGVVKKMGKSSMLRGGDANMAKQISRNPNQCLQQIHKVMDPRMLQQMGGAQNVMKMMK 483          
BLAST of mRNA_P-littoralis_Contig142.110.1 vs. uniprot
Match: A0A448YZ54_9STRA (SRP54 domain-containing protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448YZ54_9STRA)

HSP 1 Score: 553 bits (1424), Expect = 1.900e-189
Identity = 317/544 (58.27%), Postives = 388/544 (71.32%), Query Frame = 0
Query:    1 MVLQELGSKLTSALRRLHTDTV-VDKETIKAVVGDICRALLESDVNVQMVMKLRKSIEAKADSLVADQQDGSGRGGAGGVGAAQQRRS-----IQKAVVDELTGMLDPKTAPYKMKKGKSNVVMFVGLQGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFREEKYEVVIIVDTSGRHKQEEALFDEMKEIQEAVQPDNTTLIMDATQGQAVYDQAQAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMRGLAQQIQESQEGAVDPKE-MMERMSKGQFTLRDLYKQLQGAMKLGPMGKVMGMIPGMGE-MAQMANNSSTQGMFKKNLYMMDSMTDDELDGKVDLSKCE-----SRVLRIARGSGTHPDEVRGLLKLHKHFEKVFGKFGKN-MKGEASKVKQ------LQRNPALAKQHLNQMDPKVVESLGGRAKVLEIIKNGGAGAGAXXXXXXXXXXXAMLGGGMPGAAG 524
            MVL ELG KL  +LR+LHT +  V    +  V+ ++ RAL+ESDVNV++VM LR +++ K + L+ D +D      +      +QR S     +QKAVVDEL G+L+P   PY MK+GK NV++FVGLQGAGKTTTIAKFA+Y+QR+GWK AMVCADTFRAGAFDQLKQNATKLR PFYGSY++ADPV IA+EGV QF +E YEV IIVDTSGRH+QE  L +EM+EI  AV PDN  L+MDATQGQAV+DQAQAF  AV VGSV+ITKLDGHAKGGGALSAVAAT SPI FLG GEHFDDLE F+AQSF+S+LLGFGD+RGL     E+  G+ D KE +ME+MSKG+FTLRD+YKQ Q  M +GP+ K+MGM+PGM E +     +S +    KK LYMMDSMTD ELDGKVD S  E     SR+ RIA GSG HP EV+ LL++HK FE +  K GK+ M G+ +  +Q      ++RNP    Q LNQMDPK++E +GGR +V   ++N   G G  X          M G GMPG  G
Sbjct:    1 MVLAELGGKLRESLRKLHTSSGHVTATKLNQVLTEVTRALIESDVNVRLVMTLRNNVKKKVERLIEDDEDSETEEDSDX--KKEQRASNVSKMVQKAVVDELVGLLEPSRKPYGMKRGKPNVILFVGLQGAGKTTTIAKFANYYQRRGWKTAMVCADTFRAGAFDQLKQNATKLRVPFYGSYTQADPVAIAEEGVDQFVKEHYEV-IIVDTSGRHRQEAGLLEEMQEISAAVAPDNVVLVMDATQGQAVFDQAQAFSNAVDVGSVVITKLDGHAKGGGALSAVAATESPIIFLGSGEHFDDLEPFNAQSFISKLLGFGDVRGLM----EAMNGSPDDKEELMEKMSKGEFTLRDMYKQFQRVMNMGPLNKMMGMVPGMPEYLVPKGGDSDSNNRLKKFLYMMDSMTDKELDGKVDFSDHEEPQTMSRIRRIAAGSGNHPKEVQMLLQVHKQFEGMVSKMGKSGMVGKQAXAQQQALAAQMRRNPNFINQRLNQMDPKLLEQMGGREQVKSHMENMARGGGGGXG---------MPGMGMPGMGG 528          
BLAST of mRNA_P-littoralis_Contig142.110.1 vs. uniprot
Match: A0A7S4VL55_9STRA (Signal recognition particle 54 kDa protein (Fragment) n=6 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VL55_9STRA)

HSP 1 Score: 549 bits (1414), Expect = 4.910e-189
Identity = 299/517 (57.83%), Postives = 384/517 (74.27%), Query Frame = 0
Query:    1 MVLQELGSKLTSALRRLHTDT-VVDKETIKAVVGDICRALLESDVNVQMVMKLRKSIEAKADSLVADQQDGSGRGGAGGVGAAQQRRSIQKAVVDELTGMLDPK-TAPYKMKKGKSNVVMFVGLQGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFREEKYEVVIIVDTSGRHKQEEALFDEMKEIQEAVQPDNTTLIMDATQGQAVYDQAQAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMRGLAQQIQESQEGAVDPKEMMERMSKGQFTLRDLYKQLQGAMKLGPMGKVMGMIPGMGE--MAQMANNSSTQGMFKKNLYMMDSMTDDELDGKVDLSK-----CESRVLRIARGSGTHPDEVRGLLKLHKHFEKVFGKFGKN-MKGEASK------VKQLQRNPALAKQHLNQMDPKVVESLGGRAKVLEIIK---NGGAG 498
            MVL ELG KL  +LR++H+ +  +D E +  ++ +I RAL+ESDVNV++VM +R++I+ +   LV   ++G       G G+    R +QK+V++ELT ML PK   PY M++GK NV++FVGLQGAGKTT+I K+A+Y+QR+GWK  MVCADTFRAGAFDQLKQNATKLR PFYGSY+EADPV IA+EGV QF E+ YEV IIVDTSGRH+QE ALF+EM+EI  AV PDNT  +MDATQGQAVYDQAQAFH++V VGSVI+TKLDGHAKGGGALSAVAATNSPI FLG GEHFDD + F+AQSFVS+LLGFGD+RG  ++++   +     +E+ME+MSKG+FTLRD+YKQ Q  MK+GP+ KVMGM+PG+ E  + + A++  T  + KK +YMMDSMTD ELDGKVD+ K      ESR+ RIARGSGTHP EV+ +L+ HK FE V  + GK+ M G+A          Q++RNP      L  MDPK+++ +GG   V  ++K   +GG G
Sbjct:    1 MVLAELGGKLRESLRKIHSSSGAIDSEQLNVILSEITRALIESDVNVKLVMTMRENIKNRVGELVEKAEEG-------GAGSHNVNRLVQKSVMEELTSMLTPKENKPYVMRRGKPNVILFVGLQGAGKTTSIGKYANYYQRRGWKTCMVCADTFRAGAFDQLKQNATKLRVPFYGSYTEADPVAIAEEGVAQFAEDGYEV-IIVDTSGRHRQESALFEEMQEISAAVSPDNTVFVMDATQGQAVYDQAQAFHDSVPVGSVIVTKLDGHAKGGGALSAVAATNSPIIFLGSGEHFDDFDPFNAQSFVSKLLGFGDVRGFMEEMKSVHDSKTQ-EELMEKMSKGEFTLRDMYKQFQSIMKMGPLNKVMGMMPGVPEYLIPKSADDEGTLRL-KKFMYMMDSMTDAELDGKVDMHKKYDPAVESRIKRIARGSGTHPKEVQMMLQAHKQFESVISRMGKSGMMGKAGAENQRKLAAQMKRNPNQVMSQLKNMDPKILKQMGGEENVRNMMKQYQSGGMG 507          
BLAST of mRNA_P-littoralis_Contig142.110.1 vs. uniprot
Match: A0A7S3ZR98_9STRA (Signal recognition particle 54 kDa protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZR98_9STRA)

HSP 1 Score: 546 bits (1407), Expect = 9.990e-189
Identity = 296/497 (59.56%), Postives = 384/497 (77.26%), Query Frame = 0
Query:    1 MVLQELGSKLTSALRRLHTDTVVDKETIKAVVGDICRALLESDVNVQMVMKLRKSIEAKADSLVADQQDGSGRGGAGGVGAAQQRRSIQKAVVDELTGMLDPKTAPYKMKKGKSNVVMFVGLQGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFREEKYEVVIIVDTSGRHKQEEALFDEMKEIQEAVQPDNTTLIMDATQGQAVYDQAQAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMRGLAQQIQESQEGAVDPKEMMERMSKGQFTLRDLYKQLQGAMKLGPMGKVMGMIPGMGEMAQMANNSSTQGMFKKNLYMMDSMTDDELDGKVDLSKCESRVLRIARGSGTHPDEVRGLLKLHKHFEKVFGKFGKN--MKG-EASKVKQLQRNPALAKQHLNQ-MDPKVVESLGGRAKVLEIIK 493
            MVLQELG KLT+AL+++ + TV+ +E +  ++ DI  ALLE+DVNV++V +LRK+I+ +A    A +++         V  A +R+ IQ+AVVDEL  ++DP   P+++KKGK NV+MFVGLQGAGKTTTIAKFA+Y+QRKG+K  MVCADTFRAGA+DQLKQNATKLRCPFYGSY+EADPV IA EGV QFR+EKYEV IIVDTSGRH+QE ALF+EM+EI+ A++PDN   ++DATQGQAV++QA +FHEA+ +GSV++TKLDGHAKGGGALSAVAAT +PI FLG GEHFDD E F A+SFVSRLLG GDM  L +QI+++  G     EMME+ SKG+FTLRD+Y+Q +  MKLGP+ KVM MIPG+ +M    +    +   K+ +YMMDSMTDDELDG+VDL++  SRV R+ARGSGTHP EV+ LL+ HK FE V  K GK+  MKG +   VKQ+QRNP    Q L++ MDP++++ +GG   ++ ++K
Sbjct:    1 MVLQELGGKLTAALQKMQSVTVISEEVLDKMLKDIAAALLEADVNVRVVGQLRKAIKTRA----ALEEE---------VAGANRRKLIQRAVVDELVNIVDPGVTPHEVKKGKPNVIMFVGLQGAGKTTTIAKFANYYQRKGFKCCMVCADTFRAGAYDQLKQNATKLRCPFYGSYTEADPVAIAAEGVAQFRKEKYEV-IIVDTSGRHRQEAALFEEMQEIRVAIEPDNVVFVLDATQGQAVHEQATSFHEAIDIGSVVVTKLDGHAKGGGALSAVAATGAPILFLGSGEHFDDFEPFVARSFVSRLLGMGDMSTLVKQIKDT-IGDDKNDEMMEKFSKGEFTLRDMYEQFENVMKLGPLSKVMAMIPGIPQMGGEGDEGGNR--LKRFMYMMDSMTDDELDGRVDLNRAPSRVDRVARGSGTHPMEVQMLLRCHKQFEGVVTKMGKSGLMKGGDEQMVKQMQRNPNQVLQQLHKTMDPRMLQQMGGAQNLMNMMK 480          
BLAST of mRNA_P-littoralis_Contig142.110.1 vs. uniprot
Match: A0A7R9W6K7_9STRA (Signal recognition particle 54 kDa protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W6K7_9STRA)

HSP 1 Score: 541 bits (1394), Expect = 1.450e-185
Identity = 303/510 (59.41%), Postives = 383/510 (75.10%), Query Frame = 0
Query:    1 MVLQELGSKLTSALRRLHTDT-VVDKETIKAVVGDICRALLESDVNVQMVMKLRKSIEAKADSLVADQQDGSGRGGAGGVGAAQQRRSIQKAVVDELTGMLDPKT--APYKMKKGKSNVVMFVGLQGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFREEKYEVVIIVDTSGRHKQEEALFDEMKEIQEAVQPDNTTLIMDATQGQAVYDQAQAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMRGLAQQIQESQEGAVDPK---EMMERMSKGQFTLRDLYKQLQGAMKLGPMGKVMGMIPGMGE--MAQMANNSSTQGMFKKNLYMMDSMTDDELDGKVDLSK-----CESRVLRIARGSGTHPDEVRGLLKLHKHFEKVFGKFGKN-MKGEASKVKQLQ------RNPALAKQHLNQMDPKVVESLGGRAKVLE 490
            MVL ELG KL ++LR+L +    VD   +  ++ DI RAL+E+DVNV++VM LR +++ +   +V D        GA   G+A   R +Q+AVVDELT ML P     P+ M++GK NV++FVGLQGAGKTT+IAK+A+Y+QR+GWK AMVCADTFRAGAFDQLKQNATKLR PFYGSY+EADPV IA++GV QF +E YEV IIVDTSGRH+QE ALF+EM+EI  AV+PDNT  +MDATQGQAVYDQA AF EAV VGSVI+TKLDGHAKGGGALSAVAAT+SPI FLG GEHFDD + F+A+SFVS+LLG+GD+RGL ++++  Q    DPK   E+ME+M+KGQFTLRD+Y Q Q  MK+G MGKVMGM+PG+ E  + +  ++ ST+ + KK +YMMDSMTD ELDGKVD+ K      ESR+ RIA+GSGTHP EV+ LL+ HK FE V  K GK+ M G+A   +Q Q      +NPAL +Q L  MDP V++S+GG   +++
Sbjct:    1 MVLAELGGKLRNSLRKLSSGGGSVDTALLNEILSDIGRALIEADVNVKLVMSLRTNVKNRVGKIVEDSA------GAESSGSANVSRLVQRAVVDELTSMLTPNADVKPHTMRRGKPNVILFVGLQGAGKTTSIAKYANYYQRRGWKTAMVCADTFRAGAFDQLKQNATKLRVPFYGSYTEADPVAIAEDGVAQFADEGYEV-IIVDTSGRHRQESALFEEMQEISSAVRPDNTVFVMDATQGQAVYDQALAFQEAVDVGSVIVTKLDGHAKGGGALSAVAATDSPIIFLGSGEHFDDFDPFNAKSFVSKLLGYGDVRGLMEEMKSVQ----DPKTQEELMEKMAKGQFTLRDMYNQFQNMMKMGGMGKVMGMMPGIPEYLIPKSGDDESTRRL-KKFMYMMDSMTDKELDGKVDMHKKGDPTVESRIRRIAKGSGTHPKEVQMLLQCHKQFEGVVSKMGKSGMMGKAGSARQKQVMEQMRKNPALMQQQLKNMDPNVLKSMGGSGNMMQ 498          
BLAST of mRNA_P-littoralis_Contig142.110.1 vs. uniprot
Match: A0A1E7FHW5_9STRA (SRP54-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FHW5_9STRA)

HSP 1 Score: 528 bits (1360), Expect = 2.830e-181
Identity = 293/507 (57.79%), Postives = 369/507 (72.78%), Query Frame = 0
Query:    1 MVLQELGSKLTSALRRLHTDTV-VDKETIKAVVGDICRALLESDVNVQMVMKLRKSIEAKADSLVADQQDGSGRGGAGGVGAAQQRRS-----IQKAVVDELTGMLDPKTAPYKMKKGKSNVVMFVGLQGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFREEKYEVVIIVDTSGRHKQEEALFDEMKEIQEAVQPDNTTLIMDATQGQAVYDQAQAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMRGLAQQIQESQEGAVDPKEMMERMSKGQFTLRDLYKQLQGAMKLGPMGKVMGMIPGMGE-MAQMANNSSTQGMFKKNLYMMDSMTDDELDGKVDLSK-----CESRVLRIARGSGTHPDEVRGLLKLHKHFEKVFGKFGKN-MKGEASK------VKQLQRNPALAKQHLNQMDPKVVESLGGRAKV 488
            MVL ELG KL  +LR+LHT +  V    + +V+ D+ RAL+ESDV+V++VM LR +++ K + L+ +                +QR S     +QKAVVDELT +L+P   P+ MK+GK NV++FVGLQGAGKTTTIAK+A+Y+Q++GWK AMVCADTFRAGAFDQLKQNATKLR PFYGSY++ADPV IA+EGV QF +E YEV IIVDTSGRH+QE  L +EM+EI  AV PDN  L+MDATQGQ++YDQA AF  AV VGSV+ITKLDGHAKGGGALSAVAAT SPI FLG GEHFDDLE F+AQSFVS+LLG GD+RGL + +  +       +E+ME+MSKG+FTLRD+Y Q Q  M +GP+ KVMGM+PGM E +     + ++    KK LYMMDSMTD ELDGKVD S       +SR+ RIA GSGTHP EV+ LL++HK FE +  K GK+ M G+ ++      V Q+++NP    Q LNQMDPK++  +GGR +V
Sbjct:    1 MVLAELGGKLRDSLRKLHTRSGRVTTTQLNSVLSDVARALIESDVSVKLVMTLRDNVKQKVERLI-EXXXXXXXXXXXXXXXXEQRASNVSKMVQKAVVDELTSLLEPARKPHTMKRGKPNVILFVGLQGAGKTTTIAKYANYYQKRGWKTAMVCADTFRAGAFDQLKQNATKLRVPFYGSYTQADPVAIAEEGVDQFIKEHYEV-IIVDTSGRHRQEAGLLEEMQEISAAVDPDNVILVMDATQGQSLYDQALAFSNAVDVGSVVITKLDGHAKGGGALSAVAATESPIVFLGSGEHFDDLEPFNAQSFVSKLLGLGDVRGLMEAMNGAGPDGKTHEELMEKMSKGEFTLRDMYSQFQRVMNMGPLNKVMGMVPGMPEYLVPKGGDDNSNTRLKKFLYMMDSMTDKELDGKVDFSDHDDAPIQSRIRRIAAGSGTHPKEVQMLLQVHKQFEGMVNKMGKSGMMGKQAQAQQQQMVAQMRKNPNFINQRLNQMDPKMLAQMGGREQV 505          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig142.110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTY2_ECTSI0.000e+092.38Signal recognition particle 54 kDa protein (Fragme... [more]
A0A835YYR6_9STRA1.170e-19959.89Signal recognition particle 54 kDa protein n=1 Tax... [more]
A0A4D9CXS1_9STRA7.160e-19259.65Signal recognition particle 54 kDa protein n=2 Tax... [more]
F0Y473_AURAN1.620e-19160.16Signal recognition particle 54 kDa protein n=1 Tax... [more]
A0A7S2WJL8_9STRA2.300e-19059.72Signal recognition particle 54 kDa protein n=1 Tax... [more]
A0A448YZ54_9STRA1.900e-18958.27SRP54 domain-containing protein n=2 Tax=Pseudo-nit... [more]
A0A7S4VL55_9STRA4.910e-18957.83Signal recognition particle 54 kDa protein (Fragme... [more]
A0A7S3ZR98_9STRA9.990e-18959.56Signal recognition particle 54 kDa protein n=2 Tax... [more]
A0A7R9W6K7_9STRA1.450e-18559.41Signal recognition particle 54 kDa protein n=1 Tax... [more]
A0A1E7FHW5_9STRA2.830e-18157.79SRP54-domain-containing protein n=1 Tax=Fragilario... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 113..315
e-value: 1.1E-7
score: 41.5
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainSMARTSM00962SRP54_3coord: 114..310
e-value: 1.0E-92
score: 324.0
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainPFAMPF00448SRP54coord: 115..310
e-value: 1.4E-76
score: 256.6
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainPROSITEPS00300SRP54coord: 283..296
IPR013822Signal recognition particle SRP54, helical bundleSMARTSM00963SRP54_N_2coord: 2..100
e-value: 3.4E-11
score: 53.2
IPR013822Signal recognition particle SRP54, helical bundlePFAMPF02881SRP54_Ncoord: 6..96
e-value: 1.1E-16
score: 60.8
IPR042101Signal recognition particle SRP54, N-terminal domain superfamilyGENE3D1.20.120.140coord: 5..319
e-value: 5.4E-114
score: 382.1
IPR004125Signal recognition particle, SRP54 subunit, M-domainPFAMPF02978SRP_SPBcoord: 342..442
e-value: 2.7E-28
score: 98.6
IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilyGENE3D1.10.260.30coord: 328..459
e-value: 1.9E-34
score: 120.6
IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilySUPERFAMILY47446Signal peptide-binding domaincoord: 312..446
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 104..299
e-value: 5.4E-114
score: 382.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 110..312
NoneNo IPR availablePANTHERPTHR11564:SF5SIGNAL RECOGNITION PARTICLE 54 KDA PROTEINcoord: 1..505
NoneNo IPR availableCDDcd17875SRP54_Gcoord: 115..308
e-value: 2.49185E-128
score: 370.37
IPR022941Signal recognition particle, SRP54 subunitPANTHERPTHR11564SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54coord: 1..505
IPR022941Signal recognition particle, SRP54 subunitHAMAPMF_00306SRP54coord: 6..515
score: 32.821491
IPR036225SRP/SRP receptor, N-terminalSUPERFAMILY47364Domain of the SRP/SRP receptor G-proteinscoord: 1..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig142contigP-littoralis_Contig142:341524..353604 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig142.110.1mRNA_P-littoralis_Contig142.110.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig142 341524..353693 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig142.110.1 ID=prot_P-littoralis_Contig142.110.1|Name=mRNA_P-littoralis_Contig142.110.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=530bp
MVLQELGSKLTSALRRLHTDTVVDKETIKAVVGDICRALLESDVNVQMVM
KLRKSIEAKADSLVADQQDGSGRGGAGGVGAAQQRRSIQKAVVDELTGML
DPKTAPYKMKKGKSNVVMFVGLQGAGKTTTIAKFAHYWQRKGWKVAMVCA
DTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFREEKYEVV
IIVDTSGRHKQEEALFDEMKEIQEAVQPDNTTLIMDATQGQAVYDQAQAF
HEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFD
AQSFVSRLLGFGDMRGLAQQIQESQEGAVDPKEMMERMSKGQFTLRDLYK
QLQGAMKLGPMGKVMGMIPGMGEMAQMANNSSTQGMFKKNLYMMDSMTDD
ELDGKVDLSKCESRVLRIARGSGTHPDEVRGLLKLHKHFEKVFGKFGKNM
KGEASKVKQLQRNPALAKQHLNQMDPKVVESLGGRAKVLEIIKNGGAGAG
AAGGDAQAAAMAAMLGGGMPGAAGGAPGLG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR000897SRP54_GTPase_dom
IPR013822Signal_recog_particl_SRP54_hlx
IPR042101SRP54_N_sf
IPR004125Signal_recog_particle_SRP54_M
IPR036891Signal_recog_part_SRP54_M_sf
IPR027417P-loop_NTPase
IPR022941SRP54
IPR036225SRP/SRP_N