mRNA_P-littoralis_Contig142.110.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig142.110.1 vs. uniprot
Match: D8LTY2_ECTSI (Signal recognition particle 54 kDa protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTY2_ECTSI) HSP 1 Score: 886 bits (2289), Expect = 0.000e+0 Identity = 461/499 (92.38%), Postives = 485/499 (97.19%), Query Frame = 3
Query: 90 MVLQELGSKLTSALRRLHTDTVVDKETIKAVVGDICRALLESDVNVQMVMKLRKSIEAKADSLVADQQDGSGRGGAGGVGAAQQRRSIQKAVVDELTGMLDPKTAPYKMKKGKSNVVMFVGLQGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFREEKYEVVIIVDTSGRHKQEEALFDEMKEIQEAVQPDNTTLIMDATQGQAVYDQAQAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMRGLAQQIQESQEGAVDPKEMMERMS-KGQFTLRDLYKQLQGAMKLGPMGKVMGMIPGMGEMAQMANNSSTQGMFKKNLYMMDSMTDDELDGKVDLSKCESRVLRIARGSGTHPDEVRGLLKLHKHFEKVFGKFGKNMKGEASKVKQLQRNPALAKQHLNQMDPKVVESLGGRAKVLEIIKNGGAG 1583
MVLQELGSKLTSALRRLHTDTVVD+ET+KAVVGDICRALLESDVNVQMVMKLRK++EAKA+SLVA+QQDG G GGVGAAQQRRSIQKAVVDELTGMLDPKTAPYKM+KG+SNVVMFVGLQGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQF++EKYEV IIVDTSGRHKQE+ALFDEMKEIQEAVQPDNTTLIMDATQGQAV+DQA+AFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDM+GL +QIQESQEG+ DPKEMMER+S KG+FTLRDLYKQL AMKLGPM KVMGMIPGMGEMAQMANNS+TQGMFKKNLY+MDSMTDDELDGKVDLS+CESR+LRIARGSGTHPD+VRGLLKLHKHFEKVFGK GKNMKG+ASK KQLQRNPALAKQHLNQMDPKVVESLGGRAKVLEIIKNGGAG
Sbjct: 1 MVLQELGSKLTSALRRLHTDTVVDRETVKAVVGDICRALLESDVNVQMVMKLRKNVEAKAESLVAEQQDG---GAGGGVGAAQQRRSIQKAVVDELTGMLDPKTAPYKMRKGRSNVVMFVGLQGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFKQEKYEV-IIVDTSGRHKQEDALFDEMKEIQEAVQPDNTTLIMDATQGQAVFDQAKAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMKGLMRQIQESQEGSGDPKEMMERISNKGKFTLRDLYKQLSSAMKLGPMNKVMGMIPGMGEMAQMANNSTTQGMFKKNLYIMDSMTDDELDGKVDLSQCESRLLRIARGSGTHPDQVRGLLKLHKHFEKVFGKVGKNMKGDASKAKQLQRNPALAKQHLNQMDPKVVESLGGRAKVLEIIKNGGAG 495
BLAST of mRNA_P-littoralis_Contig142.110.1 vs. uniprot
Match: A0A835YYR6_9STRA (Signal recognition particle 54 kDa protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYR6_9STRA) HSP 1 Score: 576 bits (1484), Expect = 3.370e-199 Identity = 321/536 (59.89%), Postives = 403/536 (75.19%), Query Frame = 3
Query: 90 MVLQELGSKLTSALRRLHTDTVVDKETIKAVVGDICRALLESDVNVQMVMKLRKSIEAKADSLVADQQDGSGRGGAGGVGAAQQRRSIQKAVVDELTGMLDPKTAPYKMKKGKSNVVMFVGLQGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFREEKYEVVIIVDTSGRHKQEEALFDEMKEIQEAVQPDNTTLIMDATQGQAVYDQAQAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMRGLAQQIQESQEGAVDPKEMMERMSKGQFTLRDLYKQLQGAMKLGPMGKVMG-MIPGMGEMAQMANNSSTQGMFKKNLYMMDSMTDDELDGKVDLSKCESRVLRIARGSGTHPDEVRGLLKLHKHFEKVFGKFGKNMK-------GEASKVKQLQRNP---ALAKQHLNQMDPKVVESLGGRAKVLEIIKN-GGAGAGAXXXXXXXXXXXAMLGGGMPGAAG 1661
MVLQELG KL++ALR+L + TVVD+E +KA++ +I RALLESDVN+++VM+L+K++EAK + +D SG A ++R IQ+AV++EL MLDPKT PY+MKKG SNV+MFVGLQG+GKTTTIAKFAHY+QRKGW+VAMVCADTFRAGAFDQLKQNATKLR PFYGSY+EADPVRIA+EGV+QFR++++EV IIVDTSGRHKQE+ALF+EM+EIQ AVQPDN +MDATQGQAV DQA+AFHEAV VGSV+ITKLDGHAKGGGA+SAVAAT SPITFLG GEHFDDLE F A SFVS++LGFGD L +++Q++ + +DPK+MM+RM+KGQFTLRD Y+Q+QG +KLGP+ K+MG M+PG+ + AQ K+ LYMMDSM DDELDGKVD++ E RV RIARGSGT +EV+ LL+ HK EKV + GK+ A+K+ QL +NP A M P++++ +GGR V + ++ GG A +GGG GA G
Sbjct: 1 MVLQELGGKLSAALRKLQSTTVVDEEVVKAIITEITRALLESDVNIKVVMELKKNVEAKINRS----EDASG---------ASKKRLIQQAVMEELVAMLDPKTPPYQMKKGASNVIMFVGLQGSGKTTTIAKFAHYYQRKGWRVAMVCADTFRAGAFDQLKQNATKLRVPFYGSYTEADPVRIAEEGVEQFRKDRFEV-IIVDTSGRHKQEDALFEEMREIQAAVQPDNCVFVMDATQGQAVADQARAFHEAVPVGSVVITKLDGHAKGGGAMSAVAATKSPITFLGSGEHFDDLEPFVASSFVSKMLGFGDFGSLLRELQDTNDPGMDPKKMMDRMTKGQFTLRDFYQQIQGVLKLGPLNKMMGGMMPGIPDTAQQ----------KRFLYMMDSMRDDELDGKVDIAGNEKRVTRIARGSGTRVEEVQLLLRQHKAREKVVAQMGKSGMMNAATDPAMAAKMAQLMQNPNSRASQAAMSKMMSPQMLKQMGGRDGVAKRMREMGGMPGMAGGGGMDMASMMQAMGGGGAGAGG 512
BLAST of mRNA_P-littoralis_Contig142.110.1 vs. uniprot
Match: A0A4D9CXS1_9STRA (Signal recognition particle 54 kDa protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXS1_9STRA) HSP 1 Score: 558 bits (1438), Expect = 2.050e-191 Identity = 306/513 (59.65%), Postives = 383/513 (74.66%), Query Frame = 3
Query: 90 MVLQELGSKLTSALRRLHTDTVVDKETIKAVVGDICRALLESDVNVQMVMKLRKSIEAKADSLVADQQDGSGRGGAGGVGAAQQRRSIQKAVVDELTGMLDPKTAPYKMKKGKSNVVMFVGLQGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFREEKYEVVIIVDTSGRHKQEEALFDEMKEIQEAVQPDNTTLIMDATQGQAVYDQAQAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMRGLAQQIQE--SQEGAVDPKEMM-ERMSKGQFTLRDLYKQLQGAMKLGPMGKVMGMIPGM-------GEMAQMANNSSTQGMFKKNLYMMDSMTDDELDGKVDLSKCESRVLRIARGSGTHPDEVRGLLKLHKHFEKVFGKFGKNMK--GEASKVKQLQRNPALAKQHLNQ-MDPKVVESLGGRAKVLEIIKNGGAGAG 1589
MVLQELG KLT ALRRL T TVV+ + + ++ D+CRAL+ESDVN+++V LRK I+ K + +AD G R R+ +Q+AV++EL ++D T PY+MKKGKSNV+MFVGLQG+GKTTTIAK+A+Y+QRKGWK MVCADTFRAGAFDQLKQNATKLR PFYGSY+EADPVRIA+EGVQQFR E YEV IIVDTSGRHKQEEALF+EMKEIQ AV+PDN +MDATQGQAV+DQAQ FH+A VGSVI+TKLDGHAKGGGALSAVAAT +PI FLG GEHFDDL+ F+ SF+SRLLG GDMRG +++ ++EG + +E M +R+ KGQFTLRD+Y+Q + MKLGP+ KVMGM+PG GE + + + G K+ L MMDSMTD ELDGKVDL+K ESRV RIARGSG HP EV+ LLK + F ++F K G M GE +Q+ RNP L++ +DP++++ +GG +++++K G G+G
Sbjct: 1 MVLQELGDKLTGALRRLQTTTVVNDDVLNDLLQDVCRALVESDVNIKVVATLRKGIKEKVN--LADAPAGLNR-----------RKMVQRAVMEELVRLVDSGTKPYQMKKGKSNVIMFVGLQGSGKTTTIAKYANYYQRKGWKTCMVCADTFRAGAFDQLKQNATKLRVPFYGSYTEADPVRIAEEGVQQFRSEGYEV-IIVDTSGRHKQEEALFEEMKEIQAAVRPDNVVYVMDATQGQAVFDQAQGFHQAATVGSVIVTKLDGHAKGGGALSAVAATGAPIIFLGSGEHFDDLDVFNPGSFISRLLGLGDMRGFLEEVSSLGAREGGKERQEAMAQRLVKGQFTLRDMYEQFENVMKLGPLSKVMGMLPGFPSFLMGGGEGGRGGQDEAATGRLKRFLTMMDSMTDAELDGKVDLNKSESRVNRIARGSGAHPMEVQFLLKTYAQFSQMFKKMGPMMLKGGEGGIQRQMARNPGGVMNQLSKAVDPRMLQQMGGAKGMMDMMKAMGGGSG 499
BLAST of mRNA_P-littoralis_Contig142.110.1 vs. uniprot
Match: F0Y473_AURAN (Signal recognition particle 54 kDa protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y473_AURAN) HSP 1 Score: 553 bits (1426), Expect = 4.630e-191 Identity = 299/497 (60.16%), Postives = 383/497 (77.06%), Query Frame = 3
Query: 90 MVLQELGSKLTSALRRLHTDTVVDKETIKAVVGDICRALLESDVNVQMVMKLRKSIEAKADSLVADQQDGSGRGGAGGVGAAQQRRSIQKAVVDELTGMLDPKTAPYKMKKGKSNVVMFVGLQGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFREEKYEVVIIVDTSGRHKQEEALFDEMKEIQEAVQPDNTTLIMDATQGQAVYDQAQAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMRGLAQQIQESQEGAVDPKEMMERMSKGQFTLRDLYKQLQGAMKLGPMGKVMGMIPGMGEMAQMANNSSTQGMFKKNLYMMDSMTDDELDGKVDLSKCESRVLRIARGSGTHPDEVRGLLKLHKHFEKVFGKFGKN--MKG-EASKVKQLQRNPALAKQHLNQ-MDPKVVESLGGRAKVLEIIK 1568
MVLQELGSKLT+AL ++ + TV+ +E + ++ DI ALLE+DVNV++VM+LRK+I+ +A+ + ++ G+ R R+ IQKAVV+EL GMLDP ++MKKG NV+MFVGLQGAGKTTTIAKFA+++ RKG+K MVCADTFRAGA+DQL+QNATKLRCPFYGSY+EADPVRIA EGV QF+ EKYEV IIVDTSGRHKQE ALF+EM+EI+ A++P N ++DATQGQAV++QA +FHEA+ +GSV+ITKLDGHAKGGGALSAVAAT +PI FLG GEHFDD E F+A SFVSRLLG GDMRGL +QI+++ P E+ME+ SKGQFTLRD+Y+Q + MKLGP+ KVM MIPG+ M + S + K+ +YMMDSMTDDELD KVDL+K SR+ R+ARGSG HP EV+ LLK HK FE V K GK+ MKG +A+ KQ+QRNP Q L++ MDP++++ +GG ++ +++
Sbjct: 1 MVLQELGSKLTAALHKMQSVTVISEEVLDKMLKDIAAALLEADVNVRVVMELRKAIKTRAN--LEEESAGTNR-----------RKMIQKAVVEELAGMLDPGVKAHEMKKGSPNVIMFVGLQGAGKTTTIAKFANHYLRKGFKCCMVCADTFRAGAYDQLRQNATKLRCPFYGSYTEADPVRIAQEGVDQFKAEKYEV-IIVDTSGRHKQETALFEEMQEIRAAIEPQNVIFVLDATQGQAVHEQASSFHEAIDIGSVVITKLDGHAKGGGALSAVAATGAPILFLGSGEHFDDFEPFNAHSFVSRLLGMGDMRGLVEQIKDTIGDDKQP-ELMEKFSKGQFTLRDMYEQFENVMKLGPLSKVMAMIPGIPSMMGGEGDESNNRL-KRFMYMMDSMTDDELDAKVDLNKSASRIERVARGSGCHPMEVQMLLKCHKQFESVVSKMGKSGLMKGGDAAMAKQMQRNPNQVMQQLHKAMDPRMLQQMGGAQNLMSMMQ 481
BLAST of mRNA_P-littoralis_Contig142.110.1 vs. uniprot
Match: A0A7S2WJL8_9STRA (Signal recognition particle 54 kDa protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJL8_9STRA) HSP 1 Score: 551 bits (1419), Expect = 6.570e-190 Identity = 298/499 (59.72%), Postives = 381/499 (76.35%), Query Frame = 3
Query: 90 MVLQELGSKLTSALRRLHTDTVVDKETIKAVVGDICRALLESDVNVQMVMKLRKSIEAKADSLVADQQDGSGRGGAGGVGAAQQRRSIQKAVVDELTGMLDPKTAPYKMKKGKSNVVMFVGLQGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFREEKYEVVIIVDTSGRHKQEEALFDEMKEIQEAVQPDNTTLIMDATQGQAVYDQAQAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMRGLAQQIQESQEGAVDPKEMMERMSKGQFTLRDLYKQLQGAMKLGPMGKVMGMIPGM--GEMAQMANNSSTQGMFKKNLYMMDSMTDDELDGKVDLSKCESRVLRIARGSGTHPDEVRGLLKLHKHFEKVFGKFGKNMK---GEASKVKQLQRNPALAKQHLNQ-MDPKVVESLGGRAKVLEIIK 1568
MVLQELG KL AL++LH TVVD+E + A++ DI RALLE+DVNV++V +L++SI+ + + + + G+ R RR IQKAV++EL +L P PY+MK+GK NV+MFVGLQG+GKTTTIAK+A+Y+ RKG+K MVCADTFRAGA+DQLKQNATKLRCPFYGSY+EADPV+IA +GV+QF+ EKYEV IIVDTSGRHKQE LF+EM+EI+ AV+PDN I+DATQGQAV+DQA +FHEAV +GS +ITKLDGHAKGGGALSAVAAT +PITFLG GEHFDDLE F A+SFVSRLLG GDMRGL + I+E+ +P E+M++ +KG FTLRD+Y+Q Q MKLGP+ KVM MIPG+ G M Q A + + K+ +YMMDSMTD ELDG+VDL K R+ RI+RGSGTHP EV+ LL+ HK FE V K GK+ G+A+ KQ+ RNP Q +++ MDP++++ +GG V++++K
Sbjct: 1 MVLQELGRKLEGALKKLHATTVVDEEVVTAMLNDIARALLEADVNVRVVGQLKQSIKMRVN--LEEAPSGNNR-----------RRMIQKAVMEELVAILQPDGEPYQMKRGKPNVIMFVGLQGSGKTTTIAKYANYYLRKGFKCCMVCADTFRAGAYDQLKQNATKLRCPFYGSYTEADPVQIAQDGVEQFKSEKYEV-IIVDTSGRHKQESVLFEEMQEIRAAVEPDNIVFILDATQGQAVHDQASSFHEAVDIGSCVITKLDGHAKGGGALSAVAATGAPITFLGSGEHFDDLEPFRAESFVSRLLGMGDMRGLVETIKETVGDDKNP-ELMDKFAKGVFTLRDMYEQFQNVMKLGPLSKVMSMIPGIPQGLMGQ-AGDQESSNRLKRFMYMMDSMTDAELDGQVDLEKSPGRIERISRGSGTHPMEVQQLLRTHKQFEGVVKKMGKSSMLRGGDANMAKQISRNPNQCLQQIHKVMDPRMLQQMGGAQNVMKMMK 483
BLAST of mRNA_P-littoralis_Contig142.110.1 vs. uniprot
Match: A0A448YZ54_9STRA (SRP54 domain-containing protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448YZ54_9STRA) HSP 1 Score: 553 bits (1424), Expect = 5.440e-189 Identity = 317/544 (58.27%), Postives = 388/544 (71.32%), Query Frame = 3
Query: 90 MVLQELGSKLTSALRRLHTDTV-VDKETIKAVVGDICRALLESDVNVQMVMKLRKSIEAKADSLVADQQDGSGRGGAGGVGAAQQRRS-----IQKAVVDELTGMLDPKTAPYKMKKGKSNVVMFVGLQGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFREEKYEVVIIVDTSGRHKQEEALFDEMKEIQEAVQPDNTTLIMDATQGQAVYDQAQAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMRGLAQQIQESQEGAVDPKE-MMERMSKGQFTLRDLYKQLQGAMKLGPMGKVMGMIPGMGE-MAQMANNSSTQGMFKKNLYMMDSMTDDELDGKVDLSKCE-----SRVLRIARGSGTHPDEVRGLLKLHKHFEKVFGKFGKN-MKGEASKVKQ------LQRNPALAKQHLNQMDPKVVESLGGRAKVLEIIKNGGAGAGAXXXXXXXXXXXAMLGGGMPGAAG 1661
MVL ELG KL +LR+LHT + V + V+ ++ RAL+ESDVNV++VM LR +++ K + L+ D +D + +QR S +QKAVVDEL G+L+P PY MK+GK NV++FVGLQGAGKTTTIAKFA+Y+QR+GWK AMVCADTFRAGAFDQLKQNATKLR PFYGSY++ADPV IA+EGV QF +E YEV IIVDTSGRH+QE L +EM+EI AV PDN L+MDATQGQAV+DQAQAF AV VGSV+ITKLDGHAKGGGALSAVAAT SPI FLG GEHFDDLE F+AQSF+S+LLGFGD+RGL E+ G+ D KE +ME+MSKG+FTLRD+YKQ Q M +GP+ K+MGM+PGM E + +S + KK LYMMDSMTD ELDGKVD S E SR+ RIA GSG HP EV+ LL++HK FE + K GK+ M G+ + +Q ++RNP Q LNQMDPK++E +GGR +V ++N G G X M G GMPG G
Sbjct: 1 MVLAELGGKLRESLRKLHTSSGHVTATKLNQVLTEVTRALIESDVNVRLVMTLRNNVKKKVERLIEDDEDSETEEDSDX--KKEQRASNVSKMVQKAVVDELVGLLEPSRKPYGMKRGKPNVILFVGLQGAGKTTTIAKFANYYQRRGWKTAMVCADTFRAGAFDQLKQNATKLRVPFYGSYTQADPVAIAEEGVDQFVKEHYEV-IIVDTSGRHRQEAGLLEEMQEISAAVAPDNVVLVMDATQGQAVFDQAQAFSNAVDVGSVVITKLDGHAKGGGALSAVAATESPIIFLGSGEHFDDLEPFNAQSFISKLLGFGDVRGLM----EAMNGSPDDKEELMEKMSKGEFTLRDMYKQFQRVMNMGPLNKMMGMVPGMPEYLVPKGGDSDSNNRLKKFLYMMDSMTDKELDGKVDFSDHEEPQTMSRIRRIAAGSGNHPKEVQMLLQVHKQFEGMVSKMGKSGMVGKQAXAQQQALAAQMRRNPNFINQRLNQMDPKLLEQMGGREQVKSHMENMARGGGGGXG---------MPGMGMPGMGG 528
BLAST of mRNA_P-littoralis_Contig142.110.1 vs. uniprot
Match: A0A7S4VL55_9STRA (Signal recognition particle 54 kDa protein (Fragment) n=6 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VL55_9STRA) HSP 1 Score: 549 bits (1414), Expect = 1.400e-188 Identity = 299/517 (57.83%), Postives = 384/517 (74.27%), Query Frame = 3
Query: 90 MVLQELGSKLTSALRRLHTDT-VVDKETIKAVVGDICRALLESDVNVQMVMKLRKSIEAKADSLVADQQDGSGRGGAGGVGAAQQRRSIQKAVVDELTGMLDPK-TAPYKMKKGKSNVVMFVGLQGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFREEKYEVVIIVDTSGRHKQEEALFDEMKEIQEAVQPDNTTLIMDATQGQAVYDQAQAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMRGLAQQIQESQEGAVDPKEMMERMSKGQFTLRDLYKQLQGAMKLGPMGKVMGMIPGMGE--MAQMANNSSTQGMFKKNLYMMDSMTDDELDGKVDLSK-----CESRVLRIARGSGTHPDEVRGLLKLHKHFEKVFGKFGKN-MKGEASK------VKQLQRNPALAKQHLNQMDPKVVESLGGRAKVLEIIK---NGGAG 1583
MVL ELG KL +LR++H+ + +D E + ++ +I RAL+ESDVNV++VM +R++I+ + LV ++G G G+ R +QK+V++ELT ML PK PY M++GK NV++FVGLQGAGKTT+I K+A+Y+QR+GWK MVCADTFRAGAFDQLKQNATKLR PFYGSY+EADPV IA+EGV QF E+ YEV IIVDTSGRH+QE ALF+EM+EI AV PDNT +MDATQGQAVYDQAQAFH++V VGSVI+TKLDGHAKGGGALSAVAATNSPI FLG GEHFDD + F+AQSFVS+LLGFGD+RG ++++ + +E+ME+MSKG+FTLRD+YKQ Q MK+GP+ KVMGM+PG+ E + + A++ T + KK +YMMDSMTD ELDGKVD+ K ESR+ RIARGSGTHP EV+ +L+ HK FE V + GK+ M G+A Q++RNP L MDPK+++ +GG V ++K +GG G
Sbjct: 1 MVLAELGGKLRESLRKIHSSSGAIDSEQLNVILSEITRALIESDVNVKLVMTMRENIKNRVGELVEKAEEG-------GAGSHNVNRLVQKSVMEELTSMLTPKENKPYVMRRGKPNVILFVGLQGAGKTTSIGKYANYYQRRGWKTCMVCADTFRAGAFDQLKQNATKLRVPFYGSYTEADPVAIAEEGVAQFAEDGYEV-IIVDTSGRHRQESALFEEMQEISAAVSPDNTVFVMDATQGQAVYDQAQAFHDSVPVGSVIVTKLDGHAKGGGALSAVAATNSPIIFLGSGEHFDDFDPFNAQSFVSKLLGFGDVRGFMEEMKSVHDSKTQ-EELMEKMSKGEFTLRDMYKQFQSIMKMGPLNKVMGMMPGVPEYLIPKSADDEGTLRL-KKFMYMMDSMTDAELDGKVDMHKKYDPAVESRIKRIARGSGTHPKEVQMMLQAHKQFESVISRMGKSGMMGKAGAENQRKLAAQMKRNPNQVMSQLKNMDPKILKQMGGEENVRNMMKQYQSGGMG 507
BLAST of mRNA_P-littoralis_Contig142.110.1 vs. uniprot
Match: A0A7S3ZR98_9STRA (Signal recognition particle 54 kDa protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZR98_9STRA) HSP 1 Score: 546 bits (1407), Expect = 2.840e-188 Identity = 296/497 (59.56%), Postives = 384/497 (77.26%), Query Frame = 3
Query: 90 MVLQELGSKLTSALRRLHTDTVVDKETIKAVVGDICRALLESDVNVQMVMKLRKSIEAKADSLVADQQDGSGRGGAGGVGAAQQRRSIQKAVVDELTGMLDPKTAPYKMKKGKSNVVMFVGLQGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFREEKYEVVIIVDTSGRHKQEEALFDEMKEIQEAVQPDNTTLIMDATQGQAVYDQAQAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMRGLAQQIQESQEGAVDPKEMMERMSKGQFTLRDLYKQLQGAMKLGPMGKVMGMIPGMGEMAQMANNSSTQGMFKKNLYMMDSMTDDELDGKVDLSKCESRVLRIARGSGTHPDEVRGLLKLHKHFEKVFGKFGKN--MKG-EASKVKQLQRNPALAKQHLNQ-MDPKVVESLGGRAKVLEIIK 1568
MVLQELG KLT+AL+++ + TV+ +E + ++ DI ALLE+DVNV++V +LRK+I+ +A A +++ V A +R+ IQ+AVVDEL ++DP P+++KKGK NV+MFVGLQGAGKTTTIAKFA+Y+QRKG+K MVCADTFRAGA+DQLKQNATKLRCPFYGSY+EADPV IA EGV QFR+EKYEV IIVDTSGRH+QE ALF+EM+EI+ A++PDN ++DATQGQAV++QA +FHEA+ +GSV++TKLDGHAKGGGALSAVAAT +PI FLG GEHFDD E F A+SFVSRLLG GDM L +QI+++ G EMME+ SKG+FTLRD+Y+Q + MKLGP+ KVM MIPG+ +M + + K+ +YMMDSMTDDELDG+VDL++ SRV R+ARGSGTHP EV+ LL+ HK FE V K GK+ MKG + VKQ+QRNP Q L++ MDP++++ +GG ++ ++K
Sbjct: 1 MVLQELGGKLTAALQKMQSVTVISEEVLDKMLKDIAAALLEADVNVRVVGQLRKAIKTRA----ALEEE---------VAGANRRKLIQRAVVDELVNIVDPGVTPHEVKKGKPNVIMFVGLQGAGKTTTIAKFANYYQRKGFKCCMVCADTFRAGAYDQLKQNATKLRCPFYGSYTEADPVAIAAEGVAQFRKEKYEV-IIVDTSGRHRQEAALFEEMQEIRVAIEPDNVVFVLDATQGQAVHEQATSFHEAIDIGSVVVTKLDGHAKGGGALSAVAATGAPILFLGSGEHFDDFEPFVARSFVSRLLGMGDMSTLVKQIKDT-IGDDKNDEMMEKFSKGEFTLRDMYEQFENVMKLGPLSKVMAMIPGIPQMGGEGDEGGNR--LKRFMYMMDSMTDDELDGRVDLNRAPSRVDRVARGSGTHPMEVQMLLRCHKQFEGVVTKMGKSGLMKGGDEQMVKQMQRNPNQVLQQLHKTMDPRMLQQMGGAQNLMNMMK 480
BLAST of mRNA_P-littoralis_Contig142.110.1 vs. uniprot
Match: A0A7R9W6K7_9STRA (Signal recognition particle 54 kDa protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W6K7_9STRA) HSP 1 Score: 541 bits (1394), Expect = 4.130e-185 Identity = 303/510 (59.41%), Postives = 383/510 (75.10%), Query Frame = 3
Query: 90 MVLQELGSKLTSALRRLHTDT-VVDKETIKAVVGDICRALLESDVNVQMVMKLRKSIEAKADSLVADQQDGSGRGGAGGVGAAQQRRSIQKAVVDELTGMLDPKT--APYKMKKGKSNVVMFVGLQGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFREEKYEVVIIVDTSGRHKQEEALFDEMKEIQEAVQPDNTTLIMDATQGQAVYDQAQAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMRGLAQQIQESQEGAVDPK---EMMERMSKGQFTLRDLYKQLQGAMKLGPMGKVMGMIPGMGE--MAQMANNSSTQGMFKKNLYMMDSMTDDELDGKVDLSK-----CESRVLRIARGSGTHPDEVRGLLKLHKHFEKVFGKFGKN-MKGEASKVKQLQ------RNPALAKQHLNQMDPKVVESLGGRAKVLE 1559
MVL ELG KL ++LR+L + VD + ++ DI RAL+E+DVNV++VM LR +++ + +V D GA G+A R +Q+AVVDELT ML P P+ M++GK NV++FVGLQGAGKTT+IAK+A+Y+QR+GWK AMVCADTFRAGAFDQLKQNATKLR PFYGSY+EADPV IA++GV QF +E YEV IIVDTSGRH+QE ALF+EM+EI AV+PDNT +MDATQGQAVYDQA AF EAV VGSVI+TKLDGHAKGGGALSAVAAT+SPI FLG GEHFDD + F+A+SFVS+LLG+GD+RGL ++++ Q DPK E+ME+M+KGQFTLRD+Y Q Q MK+G MGKVMGM+PG+ E + + ++ ST+ + KK +YMMDSMTD ELDGKVD+ K ESR+ RIA+GSGTHP EV+ LL+ HK FE V K GK+ M G+A +Q Q +NPAL +Q L MDP V++S+GG +++
Sbjct: 1 MVLAELGGKLRNSLRKLSSGGGSVDTALLNEILSDIGRALIEADVNVKLVMSLRTNVKNRVGKIVEDSA------GAESSGSANVSRLVQRAVVDELTSMLTPNADVKPHTMRRGKPNVILFVGLQGAGKTTSIAKYANYYQRRGWKTAMVCADTFRAGAFDQLKQNATKLRVPFYGSYTEADPVAIAEDGVAQFADEGYEV-IIVDTSGRHRQESALFEEMQEISSAVRPDNTVFVMDATQGQAVYDQALAFQEAVDVGSVIVTKLDGHAKGGGALSAVAATDSPIIFLGSGEHFDDFDPFNAKSFVSKLLGYGDVRGLMEEMKSVQ----DPKTQEELMEKMAKGQFTLRDMYNQFQNMMKMGGMGKVMGMMPGIPEYLIPKSGDDESTRRL-KKFMYMMDSMTDKELDGKVDMHKKGDPTVESRIRRIAKGSGTHPKEVQMLLQCHKQFEGVVSKMGKSGMMGKAGSARQKQVMEQMRKNPALMQQQLKNMDPNVLKSMGGSGNMMQ 498
BLAST of mRNA_P-littoralis_Contig142.110.1 vs. uniprot
Match: A0A1E7FHW5_9STRA (SRP54-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FHW5_9STRA) HSP 1 Score: 528 bits (1360), Expect = 7.990e-181 Identity = 293/507 (57.79%), Postives = 369/507 (72.78%), Query Frame = 3
Query: 90 MVLQELGSKLTSALRRLHTDTV-VDKETIKAVVGDICRALLESDVNVQMVMKLRKSIEAKADSLVADQQDGSGRGGAGGVGAAQQRRS-----IQKAVVDELTGMLDPKTAPYKMKKGKSNVVMFVGLQGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFREEKYEVVIIVDTSGRHKQEEALFDEMKEIQEAVQPDNTTLIMDATQGQAVYDQAQAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMRGLAQQIQESQEGAVDPKEMMERMSKGQFTLRDLYKQLQGAMKLGPMGKVMGMIPGMGE-MAQMANNSSTQGMFKKNLYMMDSMTDDELDGKVDLSK-----CESRVLRIARGSGTHPDEVRGLLKLHKHFEKVFGKFGKN-MKGEASK------VKQLQRNPALAKQHLNQMDPKVVESLGGRAKV 1553
MVL ELG KL +LR+LHT + V + +V+ D+ RAL+ESDV+V++VM LR +++ K + L+ + +QR S +QKAVVDELT +L+P P+ MK+GK NV++FVGLQGAGKTTTIAK+A+Y+Q++GWK AMVCADTFRAGAFDQLKQNATKLR PFYGSY++ADPV IA+EGV QF +E YEV IIVDTSGRH+QE L +EM+EI AV PDN L+MDATQGQ++YDQA AF AV VGSV+ITKLDGHAKGGGALSAVAAT SPI FLG GEHFDDLE F+AQSFVS+LLG GD+RGL + + + +E+ME+MSKG+FTLRD+Y Q Q M +GP+ KVMGM+PGM E + + ++ KK LYMMDSMTD ELDGKVD S +SR+ RIA GSGTHP EV+ LL++HK FE + K GK+ M G+ ++ V Q+++NP Q LNQMDPK++ +GGR +V
Sbjct: 1 MVLAELGGKLRDSLRKLHTRSGRVTTTQLNSVLSDVARALIESDVSVKLVMTLRDNVKQKVERLI-EXXXXXXXXXXXXXXXXEQRASNVSKMVQKAVVDELTSLLEPARKPHTMKRGKPNVILFVGLQGAGKTTTIAKYANYYQKRGWKTAMVCADTFRAGAFDQLKQNATKLRVPFYGSYTQADPVAIAEEGVDQFIKEHYEV-IIVDTSGRHRQEAGLLEEMQEISAAVDPDNVILVMDATQGQSLYDQALAFSNAVDVGSVVITKLDGHAKGGGALSAVAATESPIVFLGSGEHFDDLEPFNAQSFVSKLLGLGDVRGLMEAMNGAGPDGKTHEELMEKMSKGEFTLRDMYSQFQRVMNMGPLNKVMGMVPGMPEYLVPKGGDDNSNTRLKKFLYMMDSMTDKELDGKVDFSDHDDAPIQSRIRRIAAGSGTHPKEVQMLLQVHKQFEGMVNKMGKSGMMGKQAQAQQQQMVAQMRKNPNFINQRLNQMDPKMLAQMGGREQV 505 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig142.110.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig142.110.1 >prot_P-littoralis_Contig142.110.1 ID=prot_P-littoralis_Contig142.110.1|Name=mRNA_P-littoralis_Contig142.110.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=530bp MVLQELGSKLTSALRRLHTDTVVDKETIKAVVGDICRALLESDVNVQMVMback to top mRNA from alignment at P-littoralis_Contig142:341524..353693- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig142.110.1 ID=mRNA_P-littoralis_Contig142.110.1|Name=mRNA_P-littoralis_Contig142.110.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=12170bp|location=Sequence derived from alignment at P-littoralis_Contig142:341524..353693- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig142:341524..353693- >mRNA_P-littoralis_Contig142.110.1 ID=mRNA_P-littoralis_Contig142.110.1|Name=mRNA_P-littoralis_Contig142.110.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1590bp|location=Sequence derived from alignment at P-littoralis_Contig142:341524..353693- (Pylaiella littoralis U1_48)back to top |