prot_P-littoralis_Contig14.59.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig14.59.4
Unique Nameprot_P-littoralis_Contig14.59.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length2497
Homology
BLAST of mRNA_P-littoralis_Contig14.59.4 vs. uniprot
Match: D8LN85_ECTSI (Histone deacetylase superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN85_ECTSI)

HSP 1 Score: 718 bits (1853), Expect = 1.080e-220
Identity = 840/1578 (53.23%), Postives = 908/1578 (57.54%), Query Frame = 0
Query:  859 WVIHEKDAEEADPDFQKMHKFNYRAVDLDGEILECPWVCRGCLRRSTSCGCPEGFPAWLDSDVGQTRQSMLRRYNCRAGAADCSFCRRGPGHLILLGEWARDSQSIRGGQPPPSSRALFPTSQTSSTTVQDERQAIHDRLAPARAARAANALLRRXXXXXXXXPLQHEXXXXXXXXXELLEDE-----EGDLYARDYRYRVGGTRKRGRRDLDDDPPLALPVRSRGPGRPRLSERRGSSQVRGGSSGXXXXXXXXXXXGVGADIYGADMRPSWLSTVEVRLGFTGRRSVRLKLDNCAGPEEARVPAAAXXXXXXXXXXXXXXXXXXXXXXAGCVAGVGMVSAVGKYXXXXXXXXXXASGDGDLAAGKQTGGGEGAPTIPGSTGVALSAVAPPLTTAPATAAGWPL----------SKANVGGADGGXXXXXXXARHFFTPKPMAGPRPALGRGGWASLAASTAAATFFPTFGTGGGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAHKKQ----GEPEGTAKSAEEEVGSGSWWVNRPASVLRCLRELLFAAEEXXXXXXXSFPSPKSVRTRQAEDGGGKEKSFSPRKRGEEGACCSKSSADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPVGGXXXXXXXXXXXXXXXXXXXXXDYAAGLRRGPMEQLAGKIRLLLTARLSKGCGEEGGESVGAASVELGLEEFISLLEDVHRSVERTTRQLHEKLMQRRKAGREDGLGRLKERLRRLESKRGAIRADVDRLRRRMASKTERIKTLRGLADECWAEGEPSISRDTLDSLEAMIRKEKLHLSKFRARLKELAAQGSETEALLSGIKEDKAPPPSAAKPGGKSESPLPGTTAAAFAAAPTGAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPASVAVPAAXXXTVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAASKGGS--TLPRPPASTPTGARAGSGAVPALRAATLVSSSSSSGSGR-------------------------------SSTGACGAAVKPS--------SSSIAXPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGAVGRGLXXXXXXXXXXXXXXXXVGGVRFIQRDLDAAQLMVRARKLDLAAREWVGVRCLLLKRATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPKKGKKASEPRKKGLNRALQASLLATP---GLVMESQEEAAA-ATGTDEAVGVGWGGWNSRAGDEKQYLAQAHTHDFLANVSARGWGVWGAASAPAACVVRGVSAVLSGKCANALCLLETPGRHAPSGGYGVGQRAGGG---EGPC-SVNSVAVGALYAHVQWAVGRVAVVDLDAHLATGTADILCRTLDPAFLYASVAVSDGGSASSGAGTYEHALRLIDTSTNAGKLLTRAALEGRAAGEHAGGDGGGRGALAVLSASLEVFQPDLVMISAGLDGRKGHPCGRGDLVAGDYEWLTTEV 2368
            W + + +AEEADPDFQKMHKFNYRAVDL+GEILECPWVCRGCLRRSTSCGCPEGFPAWLDSDVGQ RQS+ RRYNCRAGAA CSFCRRGPGHLILLGEWARD Q+I  G PPPSSRAL  T+      V  +R AI DRLAPARAARAANALLR XXXXXXXX                LED      EGD YARDYR RVGGTRKRGRRDL DD                                XXXXXXXXXXX                          G   V + L         R P+AA                         + G   V      XXXX            LAA          PT   +TGV          TAP   A              +KA        XX     A  FFTP PMAGPRPAL RGGWASL ASTAAATF                 XXXXXXXXXXXXXXXXXXXXXXXXX      P+ K      G P            SG+WWVNRP SVLRCLRELL     XXXXXXX                 GK   +   KR   G   +     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   A                          D+AAGLR G +EQLAGK+RLLL A LS G   EG    G   +E+GLEE+ISL+EDVHR+VERTTRQ H+ LMQ RK  REDGLG+LKERLRRLESKRG+IRAD+DRLRRRM SKT+RIKTLR LADECWAEGEPSI RDTLD+LEAMIRKEK HLSKFRAR KEL A G +TEALL+G+KEDK         GG   S LPGT+AAA   +PT    XXXXXXXXX    XXXXXXXX          P  V   AAXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P    G S  T         TG    S   PA        ++                                      ++TGAC A  +PS        +S++A P                                      DGA G                    GGVRFIQRDL+AAQLMV+ARKLDLAAREWVG+RCLLL+    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S      KA+   ++  ++ L A+L A+P   GLV+ES  EA     G  E   VGWGGW S  GDEK+YLAQAHT +FLA++SA G   WGAASA AACVVRGVSAVLSG+C NALCLLE PGRHAPSGGY VG   G     EG C +VNSVAVGALYAH+QW+VGRVAVVD   HLATGTADILCRTLDPAFLYA+VAVS                                                         A+LE F+PDLVMISAGLDGRKG PCGRGDLVA D+EWLT EV
Sbjct:  136 WGVEDAEAEEADPDFQKMHKFNYRAVDLEGEILECPWVCRGCLRRSTSCGCPEGFPAWLDSDVGQARQSLFRRYNCRAGAAGCSFCRRGPGHLILLGEWARDVQAISEGIPPPSSRALLQTTPQDRMGVLGDRTAIPDRLAPARAARAANALLRXXXXXXXXXXXXEGGG---------LEDXXXXGAEGDQYARDYRLRVGGTRKRGRRDLYDDASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVAAVAGMDRVAVSL---------RTPSAASL-----------------------LPGTDDVGGXXXXXXXX-----------QLAA---------VPTPATATGV----------TAPGAEAXXXXXXXXXXXALGAKAAXXXXXXXXXFSRGGAGPFFTPTPMAGPRPALARGGWASLFASTAAATFXXXXXAA-----VVKEDXXXXXXXXXXXXXXXXXXXXXXXXXAPEATGPSDKAMAVSAGSPAPXXXXXXXXXXSGAWWVNRPESVLRCLRELLXXXXXXXXXXXXXXXXD------------GKRHGYD--KRSGNGTADTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANAQ------------------------EDFAAGLRGGLLEQLAGKMRLLLRAGLSWGGNAEGDRGGGVMRLEMGLEEYISLVEDVHRAVERTTRQKHDSLMQERKNSREDGLGKLKERLRRLESKRGSIRADLDRLRRRMVSKTDRIKTLRTLADECWAEGEPSIGRDTLDNLEAMIRKEKTHLSKFRARAKELEAHGVDTEALLAGMKEDKG--------GGGEASSLPGTSAAA---SPTATXXXXXXXXXXXTGSDXXXXXXXXRGASSREDEKPVGVVRGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPTKKAGASPATAAAKXXXXXTGGCGESNGFPASAPXXXXXATKXXXXXXGALATXXXXXXXXXXXXXXXXXXXXXPAPPLAATGAC-APPRPSLAIMTTSTASALAAPALAVEVPSSGE---------------------------DGARG-----------GRANSNPVGGGVRFIQRDLEAAQLMVQARKLDLAAREWVGLRCLLLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAS---SFPKAATAVRRSWSKELDAALQASPEDAGLVVESPREAVPPGGGCGEEARVGWGGWGS-GGDEKRYLAQAHTQEFLAHMSAMGRQEWGAASASAACVVRGVSAVLSGRCTNALCLLENPGRHAPSGGYSVGHGCGVPKLKEGACCAVNSVAVGALYAHMQWSVGRVAVVDFGTHLATGTADILCRTLDPAFLYATVAVS---------------------------------------------------------AALEAFRPDLVMISAGLDGRKGDPCGRGDLVAEDFEWLTLEV 1488          
BLAST of mRNA_P-littoralis_Contig14.59.4 vs. uniprot
Match: A0A6H5JK20_9PHAE (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK20_9PHAE)

HSP 1 Score: 671 bits (1730), Expect = 5.050e-202
Identity = 898/1742 (51.55%), Postives = 978/1742 (56.14%), Query Frame = 0
Query:  932 YNCRAGAADCSFCRRGPGHLILLGEWARDSQSIRGGQPPPSSRALFPTSQTSSTTVQDERQAIHDRLAPARAARAANALLRRXXXXXXXXPLQHEXXXXXXXXXELLEDEEGDLYARDYRYRVGGTRKRGRRDLDDDP----------PLALPVRSRGPGRPRLSERRGSSQVRGGSSGXXXXXXXXXXXGVGADIYGADMRPSWLSTVEVRLGFTGRRSVRLKLDNCAGPEEARVPAAAXXXXXXXXXXXXXXXXXXXXXXAGCVAGVGMVSAVGKYXXXXXXXXXXASGDGDLAAGKQTGGGEGAPTIPGSTGVALSAVAPPLTTA-PAT-----------------------------------------------AAGWPLSKANVGGADGGXXXXXXXARHFFTPKPMAGPRPALGRGGWASLAASTAAATFFPTFGTGGGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAHKKQGEPEGTAKSAEEEVGSGSWWVNRPASVLRCLRELLFAAEEXXXXXXXSFPSPKSVRTRQAEDGGGKEKSFSPRKRGEEGACCSKSSADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPVGGXXXXXXXXXXXXXXXXXXXXXDYAAGLRRGPMEQLAGKIRLLLTARLSKGCGEEGGESVGAASVELGLEEFISLLEDVHRSVERTTRQLHEKLMQRRKAGREDGLGRLKERLRRLESKRGAIRADVDRLRRRMASKTERIKTLRGLADECWAEGEPSISRDTLDSLEAMIRKEKLHLSKFRARLKELAAQGSETEALLSGIKEDKAPPPSAA--KPGGKSESPLPGTTAAAFAAAPTGAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPASVAVPAAXXXTVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAASK-----------------------------------------------------GGSTLPRPPASTPT---------------------------------------------GARAGSGAVPALRAATLVSSSSSSGSGRSSTGACGAAVKPSSSSIAXPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGAVGRGLXXXXXXXXXXXXXXXXVGGVRFIQRDLDAAQLMVRARKLDLAAREWVGVRCLLLKRATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPKKGKKASEPRKKGLNRALQASLLATP---GLVMESQEEAAA-ATGTDEAVGVGWGGWNSRAGDEKQYLAQAHTHDFLANVSARGWGVWGAASAPAACVVRGVSAVLSGKCANALCLLETPGRHAPSGGYGVGQRAG---GGEGPC-SVNSVAVGALYAHVQWAVGRVAVVDLDAHLATGTADILCRTLDPAFLYASVAVSDGGSASSGAGTYEHALRLIDT--STNAGKLLTRAALEGRAAGEHAGGDGGGRGALAVLSASLEVFQPDLVMISAGLDGRKGHPCGRGDLVAGDYEWLTTEVVRMAERLCGGRVVSVVERQC--AEAD-QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVPRVLGDGLRQ---DPGTREDSGDNRMDVDSGGDEGRKGGASPSGESAXXXXX----SSELECLKGHIRGLRSGCVGF 2495
            YNCRAGAA CSFCRRGPGHLILLGEWARD ++I  G PPPS+RAL  T+      V  +R AI DRLAPARAARAANALLR XXXXXXXX     XXXXXXXXX      EGD YARDYR RVGGTRKRGRRDL DD           P    +  RGPGRPRL+ERRG S  RGGS       XXXXXX   AD YG + RP+W  TVEVRL FTG+RSVRLKLDNC    EARVP   XXXXXXXXXXXXXXXXXXXXXX                XXXXXXXXXX        A            + G   VA+S   P + +  P T                                                                XX     A  FFTP PMAGPRPAL  GGWASL ASTAA              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                       +WWVNRP SVLRCLRELL ++         S PS      R   D          R+ G         +AD    XXXXXXXXXXXXXXXXXXX                                AS V       XXXXXXXXXXX     D+AAGLR G +E+LAGK+RLLL A LS G   EG    G   +E+GLEE+ISL+EDVHR+VERTTRQ H+ LMQ+RK  +EDGLG+LKERLRRLESKRGAIRAD+DRLRRRM SKT+RIKTLR LADECWAEGEPSI RDTLD+LEAMIRKEK HLS+FRAR KEL A G +TEALL+G+KEDK    + A  +     E+ L    A      P     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         XXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                          G       PASTP+                                             GA A     P L A                TGACG    P   S+A                                        DGA G                    GGVRFIQRDL+AAQLMVRARKLDLAAREWVG+RCLLL+ ATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      P     KA+   ++  ++ L A+L A+P   GLV+ES +EA     G  E   +GWGGW S  GDEK+YLAQAHT ++LA++SA G   WGAASA AACVVRGVSAVLSG+C NALCLLE PGRHAPSGGY VG R G     EG C SVNSVAVGALYAH QW+VGRVAVVD    LATGTADILCRTLDPAFLYA+VAV D  +A++G G +EHALRL+    S                             A+AVL A+LE F+PDLVMISAGLDGRKG PCGRGDLVA D+EWLT EVV+MAERLCGGRVVSVVER C  A+AD         XXXXXXXXX             AA  R  G    +   D G+ ED         SG  +  + GA   GE A         SSELECLKGHIRGLRSGCVG 
Sbjct:   14 YNCRAGAAGCSFCRRGPGHLILLGEWARDVKAISEGIPPPSTRALLQTTPQDRMGVLGDRTAIPDRLAPARAARAANALLRXXXXXXXXXXXXXXXXXXXXXXXXA----EGDQYARDYRLRVGGTRKRGRRDLYDDASAAAAGGTGAPAEAGLVKRGPGRPRLAERRGVSAGRGGSGSVGIVGXXXXXXX--ADPYGVERRPAWSGTVEVRLAFTGQRSVRLKLDNCPS-SEARVPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAVA-----------AVAGIDRVAVSLRTPAVASLLPGTDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSRGGAGPFFTPTPMAGPRPALASGGWASLFASTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------XXXXAWWVNRPESVLRCLRELLLSS---------SSPSSSKDGKRHGYD----------RRNG-------NGTADTADAXXXXXXXXXXXXXXXXXXXSLLLETAGGCGGTPSTSAGGAK----------ASTV----WQEXXXXXXXXXXXASAQEDFAAGLRGGLLEELAGKMRLLLRAGLSWGGDAEGDCGRGVMRLEMGLEEYISLVEDVHRAVERTTRQKHDSLMQQRKNSKEDGLGKLKERLRRLESKRGAIRADLDRLRRRMVSKTDRIKTLRTLADECWAEGEPSIGRDTLDNLEAMIRKEKTHLSRFRARAKELEAHGVDTEALLAGMKEDKVRRLADAHRRERAAEEALLLQVQAPPVPTVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTKXXXXXXXXXXXXXXXXXXGGCGESNGSPASTPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPA-----PPLAA----------------TGACG----PPRPSLAI----------------VTTSTASALAAPALAVEFPSSGEDGAKG-----------GRANSNPVGGGVRFIQRDLEAAQLMVRARKLDLAAREWVGLRCLLLRGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSASSFP-----KAATAVRRSWSKELDAALQASPEDAGLVVESPQEAVPPGGGCGEEARMGWGGWGS-GGDEKRYLAQAHTQEYLAHMSAMGRQEWGAASASAACVVRGVSAVLSGRCTNALCLLENPGRHAPSGGYSVGHRCGVPKPKEGACCSVNSVAVGALYAHRQWSVGRVAVVDFGTQLATGTADILCRTLDPAFLYATVAVCDAATATTGVGAHEHALRLLGAGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAVLYAALEAFRPDLVMISAGLDGRKGDPCGRGDLVAEDFEWLTLEVVKMAERLCGGRVVSVVERHCVAAQADTNADPGGAPXXXXXXXXXVGGDSEKEGGPRNAAAGRDDGSDAMETSGDSGSCEDGAGEGATPPSGEKKRHEKGARQMGERAPHDDDDGGPSSELECLKGHIRGLRSGCVGL 1625          
BLAST of mRNA_P-littoralis_Contig14.59.4 vs. uniprot
Match: D8LN86_ECTSI (Similar to DNA (Cytosine-5-)-methyltransferase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN86_ECTSI)

HSP 1 Score: 209 bits (531), Expect = 6.020e-53
Identity = 95/109 (87.16%), Postives = 97/109 (88.99%), Query Frame = 0
Query:  510 PPLPTYSFTGTEPLRFGKHDKALLATHGAKQPKGKHPGYIITLYGKKVRRCGACPPCLSLDCGQCRYCEDMPKHGGRGSYKQPCEARKCDWVEFDRKAKAVIMQLSNEQ 618
            P LPTYS TGT+P RFGK DKALLATHGAKQPKGKHPGYIITLYGKKVRRCG C PC S DCGQCRYC DMPKHGGRGSYKQPCEARKC WVEFDRKAK VI QLS+EQ
Sbjct:  438 PRLPTYSTTGTQPPRFGKQDKALLATHGAKQPKGKHPGYIITLYGKKVRRCGECAPCRSADCGQCRYCVDMPKHGGRGSYKQPCEARKCAWVEFDRKAKTVITQLSSEQ 546          
BLAST of mRNA_P-littoralis_Contig14.59.4 vs. uniprot
Match: D7G062_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G062_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 2.660e-36
Identity = 63/67 (94.03%), Postives = 66/67 (98.51%), Query Frame = 0
Query:    1 MLERMESPHPADEGVDPRYMCLVVFLCEGGHHVTDWVSPGSMRPYLRHAAAYPYKKKAYAGTARLQV 67
            MLERME+P PADEGVDPR+MCLVVFLCEGGHHVTDWV+PGSMRPYLRHAAAYPYKKKAYAGTARLQV
Sbjct:    1 MLERMENPDPADEGVDPRHMCLVVFLCEGGHHVTDWVAPGSMRPYLRHAAAYPYKKKAYAGTARLQV 67          
BLAST of mRNA_P-littoralis_Contig14.59.4 vs. uniprot
Match: A0A6H5JKB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKB5_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 2.110e-29
Identity = 62/66 (93.94%), Postives = 65/66 (98.48%), Query Frame = 0
Query:    1 MLERMESPHPADEGVDPRYMCLVVFLCEGGHHVTDWVSPGSMRPYLRHAAAYPYKKKAYAGTARLQ 66
            MLERME+P PADEGVDPR+MCLVVFLCEGGHHVTDWV+PGSMRPYLRHAAAYPYKKKAYAGTARLQ
Sbjct:  621 MLERMENPDPADEGVDPRHMCLVVFLCEGGHHVTDWVAPGSMRPYLRHAAAYPYKKKAYAGTARLQ 686          
BLAST of mRNA_P-littoralis_Contig14.59.4 vs. uniprot
Match: A0A6H5L3L8_9PHAE (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3L8_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 1.300e-25
Identity = 98/273 (35.90%), Postives = 135/273 (49.45%), Query Frame = 0
Query: 2120 DEAVGVGWGGWNSRAGDEKQYLAQAHTHDFLANVSARGWGVWGAASAPAACVVRGVSAVLSGKCANALCLLETPGRHAPSGGYGVGQRAGGGEGPCSVNSVAVGALYAHVQWAVGRVAVVDLDAHLATGTADILCRTLDPAFLYASVAVSDGGSASSGAGTYEHALRLIDTSTNAGKLLTRAALEGRAAGEHAG---GD----GGGRGALAVLSASLEVFQPDLVMISAGLDGRKGHPCGRGDLVAGDYEWLTTEVVRMAERLCGGRVVSVVE 2385
            D+  G+G G    R G +++ +A  +  D + N  +     W AA   A  V+  V  VL G+  NA C +  PG HA    + +G  + G    C +N+VA+ ALYAH    V RVAVVD D H   GT D+LCRT  P FLYAS+   + G   +               T+  K+      EG A G       GD     G   A A + A+L+ F+P+L+++SAG D  +  P   G L A D+E  T  +V  AERLC GR+VSV+E
Sbjct:  180 DDLGGLGGG---DRGGPQERAMA-VYGRDTVGNKRS-----WEAAMTAAGAVLEAVDRVLHGEAHNAFCAVRPPGHHAGVELHCMGAVSNG---FCILNNVALAALYAHHYGNVARVAVVDFDVHHGNGTQDVLCRTEHPGFLYASIHAFNRGEGEN---------------TSQAKIFPGTGAEGEAHGNVLNIPLGDQVHPAGFHSATARVVAALDKFKPNLILVSAGFDAHQADPSHLGTLCARDFEVFTRRMVTAAERLCAGRMVSVLE 425          
BLAST of mRNA_P-littoralis_Contig14.59.4 vs. uniprot
Match: A0A1E7EJK8_9STRA (Arginase/deacetylase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EJK8_9STRA)

HSP 1 Score: 103 bits (257), Expect = 7.240e-21
Identity = 77/230 (33.48%), Postives = 109/230 (47.39%), Query Frame = 0
Query: 2161 WGAASAPAACVVRGVSAVLSGKCANALCLLETPGRHAPSGGYGVGQRAGGGEGPCSVNSVAVGALYAH---VQWAVG--RVAVVDLDAHLATGTADILCRTLDPAFLYASVAVSDGGSASSGAGTYEHALRLIDTSTNAGKLLTRAALEGRAAGEHAGGDGGGRGALAVLSASLEVFQPDLVMISAGLDGRKGHPCGRGDLVAGDYEWLTTEVVRMAERLCGGRVVSVVE 2385
            W AA +     ++GV  +++G+C NA C    PG HA   G  +        G C +N+VA  ALYA    +Q  +G  RV ++D+D H   GT DILC T DP FLY  +     G  S   G     L         G  +T  AL              G   +  ++ +++ F P+L++ISAG D  K  P   G L A D+  LT  V ++A + C GRV+SV+E
Sbjct:    2 WNAAISGVGAALQGVDMIMNGECLNAFCATRPPGHHA---GRELHAMKAVSNGFCILNTVACAALYATAPILQGGLGLSRVCIIDIDVHHGNGTQDILCSTYDPRFLYKGIFPGRCGDISPHKGVLNIPL---------GGRVTPHAL--------------GTALVTKVTPTVDKFNPELIIISAGFDAHKNDPLNMGGLTAEDFGTLTEVVCKLAYKCCSGRVLSVLE 205          
BLAST of mRNA_P-littoralis_Contig14.59.4 vs. uniprot
Match: A0A6H5JMT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMT6_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 4.470e-18
Identity = 45/53 (84.91%), Postives = 46/53 (86.79%), Query Frame = 0
Query:  506 TVTSPPLPTYSFTGTEPLRFGKHDKALLATHGAKQPKGKHPGYIITLYGKKVR 558
            T   P LPTYS TGT+P RFGK DKALLATHGAKQPKGKHPGYIITLYGKKVR
Sbjct:  201 TAVPPRLPTYSTTGTQPPRFGKQDKALLATHGAKQPKGKHPGYIITLYGKKVR 253          
BLAST of mRNA_P-littoralis_Contig14.59.4 vs. uniprot
Match: UPI001054B031 (histone deacetylase family protein n=1 Tax=Marinomonas flavescens TaxID=2529379 RepID=UPI001054B031)

HSP 1 Score: 97.4 bits (241), Expect = 8.050e-18
Identity = 75/224 (33.48%), Postives = 112/224 (50.00%), Query Frame = 0
Query: 2163 AASAPAACVVRGVSAVLSGKCANALCLLETPGRHAPSGGYGVGQRAGGGEGPCSVNSVAVGALYAHVQWAVGRVAVVDLDAHLATGTADILCRTLDPAFLYASVAVSDGGSASSGAGTYEHALRL-IDTSTNAGKLLTRAALEGRAAGEHAGGDGGGRGALAVLSASLEVFQPDLVMISAGLDGRKGHPCGRGDLVAGDYEWLTTEVVRMAERLCGGRVVSVVE 2385
            AA+  A  V++GV  V++GK  NA C +  PG HA         RA    G C  N++AVGA +A   + + RVA+VD D H   GT DI     D + LYAS         +    ++++ L + +D  T  G  + R+ +                     L   LE+FQP ++MISAG D  K  P G+  L   D++W+T +++ +A+R C GR+VSV+E
Sbjct:   93 AATHAAGAVIQGVDLVMNGKMDNAFCAVRPPGHHAEI------DRA---MGFCFFNNIAVGAKHALQHYGLKRVAIVDFDVHHGNGTEDIFKS--DTSVLYASSYQHPFYPYADPGASHDNILHMPLDAGT--GSDVFRSVISD------------------TLLPRLELFQPQIIMISAGFDAHKSDPMGQLRLEDSDFQWITEQLIDVADRHCQGRIVSVLE 285          
BLAST of mRNA_P-littoralis_Contig14.59.4 vs. uniprot
Match: A0A6N6VHY3_9HYPH (Histone deacetylase family protein n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VHY3_9HYPH)

HSP 1 Score: 97.4 bits (241), Expect = 8.350e-18
Identity = 81/224 (36.16%), Postives = 105/224 (46.88%), Query Frame = 0
Query: 2163 AASAPAACVVRGVSAVLSGKCANALCLLETPGRHAPSGGYGVGQRAGGGEGPCSVNSVAVGALYAHVQWAVGRVAVVDLDAHLATGTADILCRTLDPAFLYASVAVSDGGSASSGAGTYEHALRLIDTSTNAGKLLTRAALEGRAAGEHAGGDGGGRGALA-VLSASLEVFQPDLVMISAGLDGRKGHPCGRGDLVAGDYEWLTTEVVRMAERLCGGRVVSVVE 2385
            AA   A  V   V  V+SG+  NA C +  PG HA         RA    G C  N+VA+GAL+A     + R+AVVD D H   GT    C   DP   YAS         +  AG  EH L         G +L R    G  + E        R A + V+  +LE+FQP+ ++ISAG D     P     L   D+ W+TTE+VR+A + C GRVVS +E
Sbjct:   92 AALRAAGAVTFAVDEVMSGRVRNAFCAIRPPGHHAEP------DRA---MGFCFFNNVAIGALHARHVHGLSRIAVVDFDVHHGNGTQ--ACFETDPNLFYASTHQWPLYPGTGRAG--EHGL---------GNILNRTLPPGSGSAEF-------REAFSDVILPALEMFQPEFLLISAGFDAHTADPLANLRLTEDDFAWVTTELVRLANKFCNGRVVSTLE 286          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig14.59.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN85_ECTSI1.080e-22053.23Histone deacetylase superfamily n=1 Tax=Ectocarpus... [more]
A0A6H5JK20_9PHAE5.050e-20251.55Hist_deacetyl domain-containing protein n=1 Tax=Ec... [more]
D8LN86_ECTSI6.020e-5387.16Similar to DNA (Cytosine-5-)-methyltransferase (Pa... [more]
D7G062_ECTSI2.660e-3694.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JKB5_9PHAE2.110e-2993.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L3L8_9PHAE1.300e-2535.90Hist_deacetyl domain-containing protein n=1 Tax=Ec... [more]
A0A1E7EJK8_9STRA7.240e-2133.48Arginase/deacetylase (Fragment) n=1 Tax=Fragilario... [more]
A0A6H5JMT6_9PHAE4.470e-1884.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001054B0318.050e-1833.48histone deacetylase family protein n=1 Tax=Marinom... [more]
A0A6N6VHY3_9HYPH8.350e-1836.16Histone deacetylase family protein n=1 Tax=Parviba... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1024..1044
NoneNo IPR availableCOILSCoilCoilcoord: 773..829
NoneNo IPR availableCOILSCoilCoilcoord: 1618..1659
NoneNo IPR availableCOILSCoilCoilcoord: 1001..1021
NoneNo IPR availablePIRSRPIRSR037911-1PIRSR037911-1coord: 2163..2385
e-value: 1.1E-12
score: 44.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2434..2456
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1708..1862
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1341..1357
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2393..2408
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..309
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1011..1042
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..145
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1012..1034
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 611..860
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 390..413
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2464..2479
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 777..830
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 430..521
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2392..2481
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 965..989
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 612..639
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 750..768
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1406..1446
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 162..184
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1340..1375
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 837..856
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 682..721
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1059..1112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 323..413
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1423..1445
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1831..1849
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1514..1535
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 962..991
NoneNo IPR availablePANTHERPTHR45634HISTONE DEACETYLASEcoord: 2161..2386
IPR002857Zinc finger, CXXC-typePFAMPF02008zf-CXXCcoord: 555..598
e-value: 4.4E-10
score: 39.4
IPR002857Zinc finger, CXXC-typePROSITEPS51058ZF_CXXCcoord: 552..599
score: 11.904232
IPR023801Histone deacetylase domainPFAMPF00850Hist_deacetylcoord: 2159..2385
e-value: 6.5E-24
score: 84.9
IPR037138Histone deacetylase domain superfamilyGENE3D3.40.800.20Histone deacetylase domaincoord: 2130..2386
e-value: 1.0E-36
score: 128.7
IPR023696Ureohydrolase domain superfamilySUPERFAMILY52768Arginase/deacetylasecoord: 2139..2385

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig14contigP-littoralis_Contig14:280511..311465 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig14.59.4mRNA_P-littoralis_Contig14.59.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig14 280499..311477 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig14.59.4 ID=prot_P-littoralis_Contig14.59.4|Name=mRNA_P-littoralis_Contig14.59.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=2497bp
MLERMESPHPADEGVDPRYMCLVVFLCEGGHHVTDWVSPGSMRPYLRHAA
AYPYKKKAYAGTARLQVGRTTSVEGDVEDGGVVSEVDHPPTATGAGAGAG
AGARARARATAAPLKQGAAQRPSSPSSSSIPRPEPSGTLTGGGSSSDAPG
GAGAGAGGTASSDAEKERRRAGGTQKRQREGATAEDVSKGGGGGVGAGGE
VEEEHPAKSAAGKTGAPAAVGGSAAAVAVGSAPAGPSATTKTVTSVAAAP
VLRAEKATSAVPPKPSSREPSVVTAAPAAPASGAAVRAPAGGGSGGGLPS
VSAPRIVDTAAVSSAAAAATAAAKTNAIAKAQAKESGSFGNGAAAAAAVA
GGDKKPTLAPTADADADADAACGGAPTQTRGERSRGGVRSGRCSTRSRPS
EGGSATATSASRWPPTASFFLGCAGNTRSRGGGGGGGGGGGGRAGSSRSS
GGGVGGGFRGGRGRGGGRGSGGGGGGRGGDSIGKGADDSARAGAGAGGGG
GKGGGTVTSPPLPTYSFTGTEPLRFGKHDKALLATHGAKQPKGKHPGYII
TLYGKKVRRCGACPPCLSLDCGQCRYCEDMPKHGGRGSYKQPCEARKCDW
VEFDRKAKAVIMQLSNEQQQRENGGSGKSNANSGGRKASVSPRGSGRGRG
GPAASAAATAGGRGRGRGGAGAGAGAADQRGVPSPSSFSQSPRGGNGGGG
ETGGSSNCLSPASQASSSGTAALKGKRRRCHSLGRTPGKVRSPRFGLEEE
EDPDHEEEGLEEEERDEDSGSDMRMFRDDEEEEEQEEEEEEEEEEEEEEE
EEEEEEEEEEEEDAEGQEEEEEEEDLRDREDLLGGEEAPRVEEEEEEEEG
LEDGGDDEWVIHEKDAEEADPDFQKMHKFNYRAVDLDGEILECPWVCRGC
LRRSTSCGCPEGFPAWLDSDVGQTRQSMLRRYNCRAGAADCSFCRRGPGH
LILLGEWARDSQSIRGGQPPPSSRALFPTSQTSSTTVQDERQAIHDRLAP
ARAARAANALLRRQREQQQGQPLQHELQQQQQQQRELLEDEEGDLYARDY
RYRVGGTRKRGRRDLDDDPPLALPVRSRGPGRPRLSERRGSSQVRGGSSG
SGGGGGGGGGSGVGADIYGADMRPSWLSTVEVRLGFTGRRSVRLKLDNCA
GPEEARVPAAAAAAAAAAAAAAAVAAKAKAKAEAGCVAGVGMVSAVGKYA
AAANTAAAAASGDGDLAAGKQTGGGEGAPTIPGSTGVALSAVAPPLTTAP
ATAAGWPLSKANVGGADGGGGGEGGGARHFFTPKPMAGPRPALGRGGWAS
LAASTAAATFFPTFGTGGGLDSNNSEGGGGIGGSVNNAKKDGGGDISNGS
TTTAAVVVPAHKKQGEPEGTAKSAEEEVGSGSWWVNRPASVLRCLRELLF
AAEEPPSSSSSSFPSPKSVRTRQAEDGGGKEKSFSPRKRGEEGACCSKSS
ADADADADAAVKAGGGGGFGGLPSQSSPSAALVSLFVEAGFGGGGGGIGG
VGVGVGVASPVGGSATTSTLQQRQPKGQDEEEEEDYAAGLRRGPMEQLAG
KIRLLLTARLSKGCGEEGGESVGAASVELGLEEFISLLEDVHRSVERTTR
QLHEKLMQRRKAGREDGLGRLKERLRRLESKRGAIRADVDRLRRRMASKT
ERIKTLRGLADECWAEGEPSISRDTLDSLEAMIRKEKLHLSKFRARLKEL
AAQGSETEALLSGIKEDKAPPPSAAKPGGKSESPLPGTTAAAFAAAPTGA
PAVAAGAVGAGANGGGGNRPGPSPATGEGRGKGPASVAVPAAAAATVSGG
GVSGSSSSAEEMKKEEEEEASPPPPPSSSYLSSHPAASKGGSTLPRPPAS
TPTGARAGSGAVPALRAATLVSSSSSSGSGRSSTGACGAAVKPSSSSIAA
PVVGSNGSTAPPATGASVAKAPSRSFATAGATSAFSFSADGAVGRGLGLG
GGGGAGAGGGGGGVGGVRFIQRDLDAAQLMVRARKLDLAAREWVGVRCLL
LKRATAAAAASSAAPASASAGPTLLLRPTAVATAAAAAAAAAAAAAAAAA
AAASPAAAAAAAGASASASASATASPPKKGKKASEPRKKGLNRALQASLL
ATPGLVMESQEEAAAATGTDEAVGVGWGGWNSRAGDEKQYLAQAHTHDFL
ANVSARGWGVWGAASAPAACVVRGVSAVLSGKCANALCLLETPGRHAPSG
GYGVGQRAGGGEGPCSVNSVAVGALYAHVQWAVGRVAVVDLDAHLATGTA
DILCRTLDPAFLYASVAVSDGGSASSGAGTYEHALRLIDTSTNAGKLLTR
AALEGRAAGEHAGGDGGGRGALAVLSASLEVFQPDLVMISAGLDGRKGHP
CGRGDLVAGDYEWLTTEVVRMAERLCGGRVVSVVERQCAEADQDNDTQTA
QQALAATTTPPAPAPARAAPAPAAVPRVLGDGLRQDPGTREDSGDNRMDV
DSGGDEGRKGGASPSGESASSSSSSSELECLKGHIRGLRSGCVGFS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002857Znf_CXXC
IPR023801His_deacetylse_dom
IPR037138His_deacetylse_dom_sf
IPR023696Ureohydrolase_dom_sf