mRNA_P-littoralis_Contig14.59.4 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig14.59.4 vs. uniprot
Match: D8LN85_ECTSI (Histone deacetylase superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN85_ECTSI) HSP 1 Score: 718 bits (1853), Expect = 1.210e-220 Identity = 840/1578 (53.23%), Postives = 908/1578 (57.54%), Query Frame = 1
Query: 2587 WVIHEKDAEEADPDFQKMHKFNYRAVDLDGEILECPWVCRGCLRRSTSCGCPEGFPAWLDSDVGQTRQSMLRRYNCRAGAADCSFCRRGPGHLILLGEWARDSQSIRGGQPPPSSRALFPTSQTSSTTVQDERQAIHDRLAPARAARAANALLRRXXXXXXXXPLQHEXXXXXXXXXELLEDE-----EGDLYARDYRYRVGGTRKRGRRDLDDDPPLALPVRSRGPGRPRLSERRGSSQVRGGSSGXXXXXXXXXXXGVGADIYGADMRPSWLSTVEVRLGFTGRRSVRLKLDNCAGPEEARVPAAAXXXXXXXXXXXXXXXXXXXXXXAGCVAGVGMVSAVGKYXXXXXXXXXXASGDGDLAAGKQTGGGEGAPTIPGSTGVALSAVAPPLTTAPATAAGWPL----------SKANVGGADGGXXXXXXXARHFFTPKPMAGPRPALGRGGWASLAASTAAATFFPTFGTGGGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAHKKQ----GEPEGTAKSAEEEVGSGSWWVNRPASVLRCLRELLFAAEEXXXXXXXSFPSPKSVRTRQAEDGGGKEKSFSPRKRGEEGACCSKSSADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPVGGXXXXXXXXXXXXXXXXXXXXXDYAAGLRRGPMEQLAGKIRLLLTARLSKGCGEEGGESVGAASVELGLEEFISLLEDVHRSVERTTRQLHEKLMQRRKAGREDGLGRLKERLRRLESKRGAIRADVDRLRRRMASKTERIKTLRGLADECWAEGEPSISRDTLDSLEAMIRKEKLHLSKFRARLKELAAQGSETEALLSGIKEDKAPPPSAAKPGGKSESPLPGTTAAAFAAAPTGAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPASVAVPAAXXXTVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAASKGGS--TLPRPPASTPTGARAGSGAVPALRAATLVSSSSSSGSGR-------------------------------SSTGACGAAVKPS--------SSSIAXPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGAVGRGLXXXXXXXXXXXXXXXXVGGVRFIQRDLDAAQLMVRARKLDLAAREWVGVRCLLLKRATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPKKGKKASEPRKKGLNRALQASLLATP---GLVMESQEEAAA-ATGTDEAVGVGWGGWNSRAGDEKQYLAQAHTHDFLANVSARGWGVWGAASAPAACVVRGVSAVLSGKCANALCLLETPGRHAPSGGYGVGQRAGGG---EGPC-SVNSVAVGALYAHVQWAVGRVAVVDLDAHLATGTADILCRTLDPAFLYASVAVSDGGSASSGAGTYEHALRLIDTSTNAGKLLTRAALEGRAAGEHAGGDGGGRGALAVLSASLEVFQPDLVMISAGLDGRKGHPCGRGDLVAGDYEWLTTEV 7116
W + + +AEEADPDFQKMHKFNYRAVDL+GEILECPWVCRGCLRRSTSCGCPEGFPAWLDSDVGQ RQS+ RRYNCRAGAA CSFCRRGPGHLILLGEWARD Q+I G PPPSSRAL T+ V +R AI DRLAPARAARAANALLR XXXXXXXX LED EGD YARDYR RVGGTRKRGRRDL DD XXXXXXXXXXX G V + L R P+AA + G V XXXX LAA PT +TGV TAP A +KA XX A FFTP PMAGPRPAL RGGWASL ASTAAATF XXXXXXXXXXXXXXXXXXXXXXXXX P+ K G P SG+WWVNRP SVLRCLRELL XXXXXXX GK + KR G + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A D+AAGLR G +EQLAGK+RLLL A LS G EG G +E+GLEE+ISL+EDVHR+VERTTRQ H+ LMQ RK REDGLG+LKERLRRLESKRG+IRAD+DRLRRRM SKT+RIKTLR LADECWAEGEPSI RDTLD+LEAMIRKEK HLSKFRAR KEL A G +TEALL+G+KEDK GG S LPGT+AAA +PT XXXXXXXXX XXXXXXXX P V AAXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P G S T TG S PA ++ ++TGAC A +PS +S++A P DGA G GGVRFIQRDL+AAQLMV+ARKLDLAAREWVG+RCLLL+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S KA+ ++ ++ L A+L A+P GLV+ES EA G E VGWGGW S GDEK+YLAQAHT +FLA++SA G WGAASA AACVVRGVSAVLSG+C NALCLLE PGRHAPSGGY VG G EG C +VNSVAVGALYAH+QW+VGRVAVVD HLATGTADILCRTLDPAFLYA+VAVS A+LE F+PDLVMISAGLDGRKG PCGRGDLVA D+EWLT EV
Sbjct: 136 WGVEDAEAEEADPDFQKMHKFNYRAVDLEGEILECPWVCRGCLRRSTSCGCPEGFPAWLDSDVGQARQSLFRRYNCRAGAAGCSFCRRGPGHLILLGEWARDVQAISEGIPPPSSRALLQTTPQDRMGVLGDRTAIPDRLAPARAARAANALLRXXXXXXXXXXXXEGGG---------LEDXXXXGAEGDQYARDYRLRVGGTRKRGRRDLYDDASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVAAVAGMDRVAVSL---------RTPSAASL-----------------------LPGTDDVGGXXXXXXXX-----------QLAA---------VPTPATATGV----------TAPGAEAXXXXXXXXXXXALGAKAAXXXXXXXXXFSRGGAGPFFTPTPMAGPRPALARGGWASLFASTAAATFXXXXXAA-----VVKEDXXXXXXXXXXXXXXXXXXXXXXXXXAPEATGPSDKAMAVSAGSPAPXXXXXXXXXXSGAWWVNRPESVLRCLRELLXXXXXXXXXXXXXXXXD------------GKRHGYD--KRSGNGTADTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANAQ------------------------EDFAAGLRGGLLEQLAGKMRLLLRAGLSWGGNAEGDRGGGVMRLEMGLEEYISLVEDVHRAVERTTRQKHDSLMQERKNSREDGLGKLKERLRRLESKRGSIRADLDRLRRRMVSKTDRIKTLRTLADECWAEGEPSIGRDTLDNLEAMIRKEKTHLSKFRARAKELEAHGVDTEALLAGMKEDKG--------GGGEASSLPGTSAAA---SPTATXXXXXXXXXXXTGSDXXXXXXXXRGASSREDEKPVGVVRGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPTKKAGASPATAAAKXXXXXTGGCGESNGFPASAPXXXXXATKXXXXXXGALATXXXXXXXXXXXXXXXXXXXXXPAPPLAATGAC-APPRPSLAIMTTSTASALAAPALAVEVPSSGE---------------------------DGARG-----------GRANSNPVGGGVRFIQRDLEAAQLMVQARKLDLAAREWVGLRCLLLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAS---SFPKAATAVRRSWSKELDAALQASPEDAGLVVESPREAVPPGGGCGEEARVGWGGWGS-GGDEKRYLAQAHTQEFLAHMSAMGRQEWGAASASAACVVRGVSAVLSGRCTNALCLLENPGRHAPSGGYSVGHGCGVPKLKEGACCAVNSVAVGALYAHMQWSVGRVAVVDFGTHLATGTADILCRTLDPAFLYATVAVS---------------------------------------------------------AALEAFRPDLVMISAGLDGRKGDPCGRGDLVAEDFEWLTLEV 1488
BLAST of mRNA_P-littoralis_Contig14.59.4 vs. uniprot
Match: A0A6H5JK20_9PHAE (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK20_9PHAE) HSP 1 Score: 671 bits (1730), Expect = 5.540e-202 Identity = 898/1742 (51.55%), Postives = 978/1742 (56.14%), Query Frame = 1
Query: 2806 YNCRAGAADCSFCRRGPGHLILLGEWARDSQSIRGGQPPPSSRALFPTSQTSSTTVQDERQAIHDRLAPARAARAANALLRRXXXXXXXXPLQHEXXXXXXXXXELLEDEEGDLYARDYRYRVGGTRKRGRRDLDDDP----------PLALPVRSRGPGRPRLSERRGSSQVRGGSSGXXXXXXXXXXXGVGADIYGADMRPSWLSTVEVRLGFTGRRSVRLKLDNCAGPEEARVPAAAXXXXXXXXXXXXXXXXXXXXXXAGCVAGVGMVSAVGKYXXXXXXXXXXASGDGDLAAGKQTGGGEGAPTIPGSTGVALSAVAPPLTTA-PAT-----------------------------------------------AAGWPLSKANVGGADGGXXXXXXXARHFFTPKPMAGPRPALGRGGWASLAASTAAATFFPTFGTGGGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAHKKQGEPEGTAKSAEEEVGSGSWWVNRPASVLRCLRELLFAAEEXXXXXXXSFPSPKSVRTRQAEDGGGKEKSFSPRKRGEEGACCSKSSADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPVGGXXXXXXXXXXXXXXXXXXXXXDYAAGLRRGPMEQLAGKIRLLLTARLSKGCGEEGGESVGAASVELGLEEFISLLEDVHRSVERTTRQLHEKLMQRRKAGREDGLGRLKERLRRLESKRGAIRADVDRLRRRMASKTERIKTLRGLADECWAEGEPSISRDTLDSLEAMIRKEKLHLSKFRARLKELAAQGSETEALLSGIKEDKAPPPSAA--KPGGKSESPLPGTTAAAFAAAPTGAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPASVAVPAAXXXTVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAASK-----------------------------------------------------GGSTLPRPPASTPT---------------------------------------------GARAGSGAVPALRAATLVSSSSSSGSGRSSTGACGAAVKPSSSSIAXPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGAVGRGLXXXXXXXXXXXXXXXXVGGVRFIQRDLDAAQLMVRARKLDLAAREWVGVRCLLLKRATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPKKGKKASEPRKKGLNRALQASLLATP---GLVMESQEEAAA-ATGTDEAVGVGWGGWNSRAGDEKQYLAQAHTHDFLANVSARGWGVWGAASAPAACVVRGVSAVLSGKCANALCLLETPGRHAPSGGYGVGQRAG---GGEGPC-SVNSVAVGALYAHVQWAVGRVAVVDLDAHLATGTADILCRTLDPAFLYASVAVSDGGSASSGAGTYEHALRLIDT--STNAGKLLTRAALEGRAAGEHAGGDGGGRGALAVLSASLEVFQPDLVMISAGLDGRKGHPCGRGDLVAGDYEWLTTEVVRMAERLCGGRVVSVVERQC--AEAD-QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVPRVLGDGLRQ---DPGTREDSGDNRMDVDSGGDEGRKGGASPSGESAXXXXX----SSELECLKGHIRGLRSGCVGF 7497
YNCRAGAA CSFCRRGPGHLILLGEWARD ++I G PPPS+RAL T+ V +R AI DRLAPARAARAANALLR XXXXXXXX XXXXXXXXX EGD YARDYR RVGGTRKRGRRDL DD P + RGPGRPRL+ERRG S RGGS XXXXXX AD YG + RP+W TVEVRL FTG+RSVRLKLDNC EARVP XXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXX A + G VA+S P + + P T XX A FFTP PMAGPRPAL GGWASL ASTAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +WWVNRP SVLRCLRELL ++ S PS R D R+ G +AD XXXXXXXXXXXXXXXXXXX AS V XXXXXXXXXXX D+AAGLR G +E+LAGK+RLLL A LS G EG G +E+GLEE+ISL+EDVHR+VERTTRQ H+ LMQ+RK +EDGLG+LKERLRRLESKRGAIRAD+DRLRRRM SKT+RIKTLR LADECWAEGEPSI RDTLD+LEAMIRKEK HLS+FRAR KEL A G +TEALL+G+KEDK + A + E+ L A P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G PASTP+ GA A P L A TGACG P S+A DGA G GGVRFIQRDL+AAQLMVRARKLDLAAREWVG+RCLLL+ ATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P KA+ ++ ++ L A+L A+P GLV+ES +EA G E +GWGGW S GDEK+YLAQAHT ++LA++SA G WGAASA AACVVRGVSAVLSG+C NALCLLE PGRHAPSGGY VG R G EG C SVNSVAVGALYAH QW+VGRVAVVD LATGTADILCRTLDPAFLYA+VAV D +A++G G +EHALRL+ S A+AVL A+LE F+PDLVMISAGLDGRKG PCGRGDLVA D+EWLT EVV+MAERLCGGRVVSVVER C A+AD XXXXXXXXX AA R G + D G+ ED SG + + GA GE A SSELECLKGHIRGLRSGCVG
Sbjct: 14 YNCRAGAAGCSFCRRGPGHLILLGEWARDVKAISEGIPPPSTRALLQTTPQDRMGVLGDRTAIPDRLAPARAARAANALLRXXXXXXXXXXXXXXXXXXXXXXXXA----EGDQYARDYRLRVGGTRKRGRRDLYDDASAAAAGGTGAPAEAGLVKRGPGRPRLAERRGVSAGRGGSGSVGIVGXXXXXXX--ADPYGVERRPAWSGTVEVRLAFTGQRSVRLKLDNCPS-SEARVPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAVA-----------AVAGIDRVAVSLRTPAVASLLPGTDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSRGGAGPFFTPTPMAGPRPALASGGWASLFASTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------XXXXAWWVNRPESVLRCLRELLLSS---------SSPSSSKDGKRHGYD----------RRNG-------NGTADTADAXXXXXXXXXXXXXXXXXXXSLLLETAGGCGGTPSTSAGGAK----------ASTV----WQEXXXXXXXXXXXASAQEDFAAGLRGGLLEELAGKMRLLLRAGLSWGGDAEGDCGRGVMRLEMGLEEYISLVEDVHRAVERTTRQKHDSLMQQRKNSKEDGLGKLKERLRRLESKRGAIRADLDRLRRRMVSKTDRIKTLRTLADECWAEGEPSIGRDTLDNLEAMIRKEKTHLSRFRARAKELEAHGVDTEALLAGMKEDKVRRLADAHRRERAAEEALLLQVQAPPVPTVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTKXXXXXXXXXXXXXXXXXXGGCGESNGSPASTPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPA-----PPLAA----------------TGACG----PPRPSLAI----------------VTTSTASALAAPALAVEFPSSGEDGAKG-----------GRANSNPVGGGVRFIQRDLEAAQLMVRARKLDLAAREWVGLRCLLLRGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSASSFP-----KAATAVRRSWSKELDAALQASPEDAGLVVESPQEAVPPGGGCGEEARMGWGGWGS-GGDEKRYLAQAHTQEYLAHMSAMGRQEWGAASASAACVVRGVSAVLSGRCTNALCLLENPGRHAPSGGYSVGHRCGVPKPKEGACCSVNSVAVGALYAHRQWSVGRVAVVDFGTQLATGTADILCRTLDPAFLYATVAVCDAATATTGVGAHEHALRLLGAGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAVLYAALEAFRPDLVMISAGLDGRKGDPCGRGDLVAEDFEWLTLEVVKMAERLCGGRVVSVVERHCVAAQADTNADPGGAPXXXXXXXXXVGGDSEKEGGPRNAAAGRDDGSDAMETSGDSGSCEDGAGEGATPPSGEKKRHEKGARQMGERAPHDDDDGGPSSELECLKGHIRGLRSGCVGL 1625
BLAST of mRNA_P-littoralis_Contig14.59.4 vs. uniprot
Match: D8LN86_ECTSI (Similar to DNA (Cytosine-5-)-methyltransferase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN86_ECTSI) HSP 1 Score: 209 bits (531), Expect = 6.050e-53 Identity = 95/109 (87.16%), Postives = 97/109 (88.99%), Query Frame = 1
Query: 1540 PPLPTYSFTGTEPLRFGKHDKALLATHGAKQPKGKHPGYIITLYGKKVRRCGACPPCLSLDCGQCRYCEDMPKHGGRGSYKQPCEARKCDWVEFDRKAKAVIMQLSNEQ 1866
P LPTYS TGT+P RFGK DKALLATHGAKQPKGKHPGYIITLYGKKVRRCG C PC S DCGQCRYC DMPKHGGRGSYKQPCEARKC WVEFDRKAK VI QLS+EQ
Sbjct: 438 PRLPTYSTTGTQPPRFGKQDKALLATHGAKQPKGKHPGYIITLYGKKVRRCGECAPCRSADCGQCRYCVDMPKHGGRGSYKQPCEARKCAWVEFDRKAKTVITQLSSEQ 546
BLAST of mRNA_P-littoralis_Contig14.59.4 vs. uniprot
Match: D7G062_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G062_ECTSI) HSP 1 Score: 142 bits (357), Expect = 3.640e-36 Identity = 63/67 (94.03%), Postives = 66/67 (98.51%), Query Frame = 1
Query: 13 MLERMESPHPADEGVDPRYMCLVVFLCEGGHHVTDWVSPGSMRPYLRHAAAYPYKKKAYAGTARLQV 213
MLERME+P PADEGVDPR+MCLVVFLCEGGHHVTDWV+PGSMRPYLRHAAAYPYKKKAYAGTARLQV
Sbjct: 1 MLERMENPDPADEGVDPRHMCLVVFLCEGGHHVTDWVAPGSMRPYLRHAAAYPYKKKAYAGTARLQV 67
BLAST of mRNA_P-littoralis_Contig14.59.4 vs. uniprot
Match: A0A6H5JKB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKB5_9PHAE) HSP 1 Score: 142 bits (358), Expect = 7.210e-30 Identity = 63/70 (90.00%), Postives = 68/70 (97.14%), Query Frame = 1
Query: 1 SRTQMLERMESPHPADEGVDPRYMCLVVFLCEGGHHVTDWVSPGSMRPYLRHAAAYPYKKKAYAGTARLQ 210
S+ +MLERME+P PADEGVDPR+MCLVVFLCEGGHHVTDWV+PGSMRPYLRHAAAYPYKKKAYAGTARLQ
Sbjct: 617 SKREMLERMENPDPADEGVDPRHMCLVVFLCEGGHHVTDWVAPGSMRPYLRHAAAYPYKKKAYAGTARLQ 686
BLAST of mRNA_P-littoralis_Contig14.59.4 vs. uniprot
Match: A0A6H5L3L8_9PHAE (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3L8_9PHAE) HSP 1 Score: 124 bits (311), Expect = 1.310e-25 Identity = 98/273 (35.90%), Postives = 135/273 (49.45%), Query Frame = 1
Query: 6370 DEAVGVGWGGWNSRAGDEKQYLAQAHTHDFLANVSARGWGVWGAASAPAACVVRGVSAVLSGKCANALCLLETPGRHAPSGGYGVGQRAGGGEGPCSVNSVAVGALYAHVQWAVGRVAVVDLDAHLATGTADILCRTLDPAFLYASVAVSDGGSASSGAGTYEHALRLIDTSTNAGKLLTRAALEGRAAGEHAG---GD----GGGRGALAVLSASLEVFQPDLVMISAGLDGRKGHPCGRGDLVAGDYEWLTTEVVRMAERLCGGRVVSVVE 7167
D+ G+G G R G +++ +A + D + N + W AA A V+ V VL G+ NA C + PG HA + +G + G C +N+VA+ ALYAH V RVAVVD D H GT D+LCRT P FLYAS+ + G + T+ K+ EG A G GD G A A + A+L+ F+P+L+++SAG D + P G L A D+E T +V AERLC GR+VSV+E
Sbjct: 180 DDLGGLGGG---DRGGPQERAMA-VYGRDTVGNKRS-----WEAAMTAAGAVLEAVDRVLHGEAHNAFCAVRPPGHHAGVELHCMGAVSNG---FCILNNVALAALYAHHYGNVARVAVVDFDVHHGNGTQDVLCRTEHPGFLYASIHAFNRGEGEN---------------TSQAKIFPGTGAEGEAHGNVLNIPLGDQVHPAGFHSATARVVAALDKFKPNLILVSAGFDAHQADPSHLGTLCARDFEVFTRRMVTAAERLCAGRMVSVLE 425
BLAST of mRNA_P-littoralis_Contig14.59.4 vs. uniprot
Match: A0A1E7EJK8_9STRA (Arginase/deacetylase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EJK8_9STRA) HSP 1 Score: 103 bits (257), Expect = 7.260e-21 Identity = 77/230 (33.48%), Postives = 109/230 (47.39%), Query Frame = 1
Query: 6493 WGAASAPAACVVRGVSAVLSGKCANALCLLETPGRHAPSGGYGVGQRAGGGEGPCSVNSVAVGALYAH---VQWAVG--RVAVVDLDAHLATGTADILCRTLDPAFLYASVAVSDGGSASSGAGTYEHALRLIDTSTNAGKLLTRAALEGRAAGEHAGGDGGGRGALAVLSASLEVFQPDLVMISAGLDGRKGHPCGRGDLVAGDYEWLTTEVVRMAERLCGGRVVSVVE 7167
W AA + ++GV +++G+C NA C PG HA G + G C +N+VA ALYA +Q +G RV ++D+D H GT DILC T DP FLY + G S G L G +T AL G + ++ +++ F P+L++ISAG D K P G L A D+ LT V ++A + C GRV+SV+E
Sbjct: 2 WNAAISGVGAALQGVDMIMNGECLNAFCATRPPGHHA---GRELHAMKAVSNGFCILNTVACAALYATAPILQGGLGLSRVCIIDIDVHHGNGTQDILCSTYDPRFLYKGIFPGRCGDISPHKGVLNIPL---------GGRVTPHAL--------------GTALVTKVTPTVDKFNPELIIISAGFDAHKNDPLNMGGLTAEDFGTLTEVVCKLAYKCCSGRVLSVLE 205
BLAST of mRNA_P-littoralis_Contig14.59.4 vs. uniprot
Match: A0A6H5JMT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMT6_9PHAE) HSP 1 Score: 97.1 bits (240), Expect = 4.480e-18 Identity = 45/53 (84.91%), Postives = 46/53 (86.79%), Query Frame = 1
Query: 1528 TVTSPPLPTYSFTGTEPLRFGKHDKALLATHGAKQPKGKHPGYIITLYGKKVR 1686
T P LPTYS TGT+P RFGK DKALLATHGAKQPKGKHPGYIITLYGKKVR
Sbjct: 201 TAVPPRLPTYSTTGTQPPRFGKQDKALLATHGAKQPKGKHPGYIITLYGKKVR 253
BLAST of mRNA_P-littoralis_Contig14.59.4 vs. uniprot
Match: UPI001054B031 (histone deacetylase family protein n=1 Tax=Marinomonas flavescens TaxID=2529379 RepID=UPI001054B031) HSP 1 Score: 97.4 bits (241), Expect = 8.080e-18 Identity = 75/224 (33.48%), Postives = 112/224 (50.00%), Query Frame = 1
Query: 6499 AASAPAACVVRGVSAVLSGKCANALCLLETPGRHAPSGGYGVGQRAGGGEGPCSVNSVAVGALYAHVQWAVGRVAVVDLDAHLATGTADILCRTLDPAFLYASVAVSDGGSASSGAGTYEHALRL-IDTSTNAGKLLTRAALEGRAAGEHAGGDGGGRGALAVLSASLEVFQPDLVMISAGLDGRKGHPCGRGDLVAGDYEWLTTEVVRMAERLCGGRVVSVVE 7167
AA+ A V++GV V++GK NA C + PG HA RA G C N++AVGA +A + + RVA+VD D H GT DI D + LYAS + ++++ L + +D T G + R+ + L LE+FQP ++MISAG D K P G+ L D++W+T +++ +A+R C GR+VSV+E
Sbjct: 93 AATHAAGAVIQGVDLVMNGKMDNAFCAVRPPGHHAEI------DRA---MGFCFFNNIAVGAKHALQHYGLKRVAIVDFDVHHGNGTEDIFKS--DTSVLYASSYQHPFYPYADPGASHDNILHMPLDAGT--GSDVFRSVISD------------------TLLPRLELFQPQIIMISAGFDAHKSDPMGQLRLEDSDFQWITEQLIDVADRHCQGRIVSVLE 285
BLAST of mRNA_P-littoralis_Contig14.59.4 vs. uniprot
Match: A0A6N6VHY3_9HYPH (Histone deacetylase family protein n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VHY3_9HYPH) HSP 1 Score: 97.4 bits (241), Expect = 8.370e-18 Identity = 81/224 (36.16%), Postives = 105/224 (46.88%), Query Frame = 1
Query: 6499 AASAPAACVVRGVSAVLSGKCANALCLLETPGRHAPSGGYGVGQRAGGGEGPCSVNSVAVGALYAHVQWAVGRVAVVDLDAHLATGTADILCRTLDPAFLYASVAVSDGGSASSGAGTYEHALRLIDTSTNAGKLLTRAALEGRAAGEHAGGDGGGRGALA-VLSASLEVFQPDLVMISAGLDGRKGHPCGRGDLVAGDYEWLTTEVVRMAERLCGGRVVSVVE 7167
AA A V V V+SG+ NA C + PG HA RA G C N+VA+GAL+A + R+AVVD D H GT C DP YAS + AG EH L G +L R G + E R A + V+ +LE+FQP+ ++ISAG D P L D+ W+TTE+VR+A + C GRVVS +E
Sbjct: 92 AALRAAGAVTFAVDEVMSGRVRNAFCAIRPPGHHAEP------DRA---MGFCFFNNVAIGALHARHVHGLSRIAVVDFDVHHGNGTQ--ACFETDPNLFYASTHQWPLYPGTGRAG--EHGL---------GNILNRTLPPGSGSAEF-------REAFSDVILPALEMFQPEFLLISAGFDAHTADPLANLRLTEDDFAWVTTELVRLANKFCNGRVVSTLE 286 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig14.59.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig14.59.4 >prot_P-littoralis_Contig14.59.4 ID=prot_P-littoralis_Contig14.59.4|Name=mRNA_P-littoralis_Contig14.59.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=2497bp MLERMESPHPADEGVDPRYMCLVVFLCEGGHHVTDWVSPGSMRPYLRHAAback to top mRNA from alignment at P-littoralis_Contig14:280499..311477+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig14.59.4 ID=mRNA_P-littoralis_Contig14.59.4|Name=mRNA_P-littoralis_Contig14.59.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=30979bp|location=Sequence derived from alignment at P-littoralis_Contig14:280499..311477+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig14:280499..311477+ >mRNA_P-littoralis_Contig14.59.4 ID=mRNA_P-littoralis_Contig14.59.4|Name=mRNA_P-littoralis_Contig14.59.4|organism=Pylaiella littoralis U1_48|type=CDS|length=7491bp|location=Sequence derived from alignment at P-littoralis_Contig14:280499..311477+ (Pylaiella littoralis U1_48)back to top |