prot_P-littoralis_Contig1328.8.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig1328.8.1
Unique Name	prot_P-littoralis_Contig1328.8.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	111

Homology

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BLAST of mRNA_P-littoralis_Contig1328.8.1 vs. uniprot
Match: A0A6H5JYD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD3_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 3.300e-35
Identity = 64/108 (59.26%), Postives = 83/108 (76.85%), Query Frame = 0

Query:    4 GAAFAATVSADIWHRRLGHLNPGSMDLLRKKEGNGIEYADSMSACDICALSKSRQQAHPKTAENKTTGPMDLVGTDLMGPFSPPAKGGFRFAAKYTDYHTHMKEVFLL 111
            G A AATV+A+ WHR L HLN  SM+LLRKKE NG++++DSM+ CDICA+SKSRQ AHP+    +TT PM LV TD MG  +P AKGGF + +K+TD ++ MKE++LL
Sbjct:  299 GVACAATVNANTWHRWLRHLNFRSMELLRKKEDNGVDFSDSMTPCDICAISKSRQLAHPEKTNRETTAPMQLVYTDNMGKTTPLAKGGFGYVSKFTDAYSWMKEIYLL 406

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BLAST of mRNA_P-littoralis_Contig1328.8.1 vs. uniprot
Match: A0A6H5JT61_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT61_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 2.220e-32
Identity = 61/108 (56.48%), Postives = 80/108 (74.07%), Query Frame = 0

Query:    4 GAAFAATVSADIWHRRLGHLNPGSMDLLRKKEGNGIEYADSMSACDICALSKSRQQAHPKTAENKTTGPMDLVGTDLMGPFSPPAKGGFRFAAKYTDYHTHMKEVFLL 111
            G AFA TV+A+  HRRLGHLN  SM LLRKKE N ++++DSM+ CDICA+SKS Q AHPK    +TT PM LV TD+MG  +P AKGGF + + + D ++ +KE++LL
Sbjct:   97 GVAFATTVNANTPHRRLGHLNFRSMKLLRKKEENEVDFSDSMTPCDICAISKSTQLAHPKKTSRETTAPMLLVYTDIMGKTTPLAKGGFGYVSMFNDAYSRIKEIYLL 204

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BLAST of mRNA_P-littoralis_Contig1328.8.1 vs. uniprot
Match: A0A6H5K1J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J1_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 4.780e-32
Identity = 57/111 (51.35%), Postives = 75/111 (67.57%), Query Frame = 0

Query:    1 DLPGAAFAATVSADIWHRRLGHLNPGSMDLLRKKEGNGIEYADSMSACDICALSKSRQQAHPKTAENKTTGPMDLVGTDLMGPFSPPAKGGFRFAAKYTDYHTHMKEVFLL 111
            ++ G A     SA +WHRR+GH++  S+D+LRK +GNG+EY   +SACD+CA+  S+QQ HPK A    + P  LV TDLMGPFSPPA GGF +  K+ D H    EVFL+
Sbjct:  255 EISGVALPVK-SAALWHRRVGHVHGRSLDILRKVQGNGVEYNGELSACDVCAVGNSKQQNHPKRASYDASRPFQLVTTDLMGPFSPPALGGFLYIKKFVDQHIKWNEVFLM 364

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BLAST of mRNA_P-littoralis_Contig1328.8.1 vs. uniprot
Match: A0A6H5KZ34_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ34_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 1.710e-30
Identity = 55/104 (52.88%), Postives = 71/104 (68.27%), Query Frame = 0

Query:   11 VSADIWHRRLGHLNPGSMDLLRKKEGNGIEYADSMSACDICALSKSRQQAHPKTAENKTTGPMDLVGTDLMGPFSPPAK---GGFRFAAKYTDYHTHMKEVFLL 111
            VSAD WHRRLGHLN  S+D+LRK  G G++Y DS+S C +C ++K +Q  HPK +  + + P  LV  D MGP +PPAK   G F +A K TD +T MKEV+LL
Sbjct:   40 VSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLL 143

[Close]

BLAST of mRNA_P-littoralis_Contig1328.8.1 vs. uniprot
Match: A0A6H5JFQ6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFQ6_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 3.970e-29
Identity = 55/104 (52.88%), Postives = 73/104 (70.19%), Query Frame = 0

Query:   11 VSADIWHRRLGHLNPGSMDLLRKKEGNGIEYADSMSACDICALSKSRQQAHPKTAENKTTGPMDLVGTDLMGPFSPPAK---GGFRFAAKYTDYHTHMKEVFLL 111
            V+AD WHRRLGHLN  S+D+LRK  G G++Y DS+S C +C ++K +Q +HPK + ++ + P  LV  D MGP +PPAK   G F +A K TD HT MKEV+LL
Sbjct:   40 VTADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSSHPKQSTHELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDHTKMKEVYLL 143

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BLAST of mRNA_P-littoralis_Contig1328.8.1 vs. uniprot
Match: A0A6H5KCM0_9PHAE (Integrase catalytic domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCM0_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 1.710e-28
Identity = 55/104 (52.88%), Postives = 71/104 (68.27%), Query Frame = 0

Query:   11 VSADIWHRRLGHLNPGSMDLLRKKEGNGIEYADSMSACDICALSKSRQQAHPKTAENKTTGPMDLVGTDLMGPFSPPAK---GGFRFAAKYTDYHTHMKEVFLL 111
            VSAD WHRRLGHLN  S+D+LRK  G G++Y DS+S C +C ++K +Q  HPK +  + + P  LV  D MGP +PPAK   G F +A K TD +T MKEV+LL
Sbjct:   40 VSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLL 143

[Close]

BLAST of mRNA_P-littoralis_Contig1328.8.1 vs. uniprot
Match: A0A6H5KT84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT84_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 2.400e-28
Identity = 55/104 (52.88%), Postives = 71/104 (68.27%), Query Frame = 0

Query:   11 VSADIWHRRLGHLNPGSMDLLRKKEGNGIEYADSMSACDICALSKSRQQAHPKTAENKTTGPMDLVGTDLMGPFSPPAK---GGFRFAAKYTDYHTHMKEVFLL 111
            VSAD WHRRLGHLN  S+D+LRK  G G++Y DS+S C +C ++K +Q  HPK +  + + P  LV  D MGP +PPAK   G F +A K TD +T MKEV+LL
Sbjct:  416 VSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTREISRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLL 519

[Close]

BLAST of mRNA_P-littoralis_Contig1328.8.1 vs. uniprot
Match: A0A6H5K500_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K500_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 2.520e-28
Identity = 55/104 (52.88%), Postives = 71/104 (68.27%), Query Frame = 0

Query:   11 VSADIWHRRLGHLNPGSMDLLRKKEGNGIEYADSMSACDICALSKSRQQAHPKTAENKTTGPMDLVGTDLMGPFSPPAK---GGFRFAAKYTDYHTHMKEVFLL 111
            VSAD WHRRLGHLN  S+D+LRK  G G++Y DS+S C +C ++K +Q  HPK +  + + P  LV  D MGP +PPAK   G F +A K TD +T MKEV+LL
Sbjct:   40 VSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLL 143

[Close]

BLAST of mRNA_P-littoralis_Contig1328.8.1 vs. uniprot
Match: A0A6H5K1R7_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1R7_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 2.550e-28
Identity = 55/104 (52.88%), Postives = 71/104 (68.27%), Query Frame = 0

Query:   11 VSADIWHRRLGHLNPGSMDLLRKKEGNGIEYADSMSACDICALSKSRQQAHPKTAENKTTGPMDLVGTDLMGPFSPPAK---GGFRFAAKYTDYHTHMKEVFLL 111
            VSAD WHRRLGHLN  S+D+LRK  G G++Y DS+S C +C ++K +Q  HPK +  + + P  LV  D MGP +PPAK   G F +A K TD +T MKEV+LL
Sbjct:   40 VSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLL 143

[Close]

BLAST of mRNA_P-littoralis_Contig1328.8.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 2.590e-28
Identity = 55/104 (52.88%), Postives = 71/104 (68.27%), Query Frame = 0

Query:   11 VSADIWHRRLGHLNPGSMDLLRKKEGNGIEYADSMSACDICALSKSRQQAHPKTAENKTTGPMDLVGTDLMGPFSPPAK---GGFRFAAKYTDYHTHMKEVFLL 111
            VSAD WHRRLGHLN  S+D+LRK  G G++Y DS+S C +C ++K +Q  HPK +  + + P  LV  D MGP +PPAK   G F +A K TD +T MKEV+LL
Sbjct:   40 VSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLL 143

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig1328.8.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig1328.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JYD3_9PHAE	3.300e-35	59.26	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JT61_9PHAE	2.220e-32	56.48	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5K1J1_9PHAE	4.780e-32	51.35	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KZ34_9PHAE	1.710e-30	52.88	Integrase catalytic domain-containing protein n=2 ...	[more]
A0A6H5JFQ6_9PHAE	3.970e-29	52.88	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KCM0_9PHAE	1.710e-28	52.88	Integrase catalytic domain-containing protein n=5 ...	[more]
A0A6H5KT84_9PHAE	2.400e-28	52.88	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K500_9PHAE	2.520e-28	52.88	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5K1R7_9PHAE	2.550e-28	52.88	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5JJR8_9PHAE	2.590e-28	52.88	Integrase catalytic domain-containing protein n=11...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 9..56 e-value: 3.6E-9 score: 36.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..80

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig1328	contig	P-littoralis_Contig1328:32225..32557 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig1328.8.1	mRNA_P-littoralis_Contig1328.8.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig1328 32225..32557 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig1328.8.1 ID=prot_P-littoralis_Contig1328.8.1|Name=mRNA_P-littoralis_Contig1328.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=111bp
DLPGAAFAATVSADIWHRRLGHLNPGSMDLLRKKEGNGIEYADSMSACDI
CALSKSRQQAHPKTAENKTTGPMDLVGTDLMGPFSPPAKGGFRFAAKYTD
YHTHMKEVFLL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR025724	GAG-pre-integrase_dom