prot_P-littoralis_Contig1226.2.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1226.2.1
Unique Nameprot_P-littoralis_Contig1226.2.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length79
Homology
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BLAST of mRNA_P-littoralis_Contig1226.2.1 vs. uniprot
Match: A0A6H5JJS4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJS4_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 6.870e-11
Identity = 32/80 (40.00%), Postives = 47/80 (58.75%), Query Frame = 0 
Query:    1 CSFEKVFGSVRGMLPATA-PGRNTPNWIQNLPRLDRYATALIPERLRHIWEAWFVETDGNCLWRALAKALWDCDQFWPHL 79
            C++ KVFG+  G++P  A PG+    +       D  AT ++   LR  + A +VE DGNC WR++AKALW  D++W  L
Sbjct:   60 CTWPKVFGTPEGVVPTVARPGKGQEMY-------DPKATMILTPELRKTFVALWVEGDGNCFWRSMAKALWGTDEYWRQL 132
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1226.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JJS4_9PHAE6.870e-1140.00SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1226contigP-littoralis_Contig1226:7240..7990 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1226.2.1mRNA_P-littoralis_Contig1226.2.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1226 7239..7990 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1226.2.1 ID=prot_P-littoralis_Contig1226.2.1|Name=mRNA_P-littoralis_Contig1226.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=79bp
CSFEKVFGSVRGMLPATAPGRNTPNWIQNLPRLDRYATALIPERLRHIWE
AWFVETDGNCLWRALAKALWDCDQFWPHL
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