prot_P-littoralis_Contig121.70.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig121.70.1
Unique Nameprot_P-littoralis_Contig121.70.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length195
Homology
BLAST of mRNA_P-littoralis_Contig121.70.1 vs. uniprot
Match: D8LEJ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEJ2_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 3.920e-67
Identity = 118/184 (64.13%), Postives = 140/184 (76.09%), Query Frame = 0
Query:    8 LGLATRRASGAVRNLSAWLSLAAVIIVLVAAGESHAFVAPSASLPLAGASSAVSNTSGHERGGNTRPSXXXXXXXXXGCLAMSADGGATPAGPTKMAAVLYTYVDGMEEKRAPHRSGHLDLLKNMSEEGSCLLGGALVEPCDGGIVLFSTPEKAREFVDNDPYVSSGLVTKYQIRDYMAVVGTM 191
            LG+A+R   G VRN SAWL+LA   +V + AG   AFVAPSASLPLAG S AVS   GH RG +TRP+         G L+MSADG AT   P K+AAV+YTYVDGM +KR P+R+ HLDLLK M+EEG+CLLGGA +EPCDG ++LFS+PEKA++FVD DPY + GLVTKYQIRDYMAVVGTM
Sbjct:   10 LGVASR---GTVRNFSAWLALA---LVALTAGVCDAFVAPSASLPLAGGS-AVSKIDGHSRGCSTRPNSSGS-----GSLSMSADGSATKGEPAKLAAVVYTYVDGMVDKRGPYRTDHLDLLKAMTEEGTCLLGGAFLEPCDGAVLLFSSPEKAQQFVDKDPYNTGGLVTKYQIRDYMAVVGTM 181          
BLAST of mRNA_P-littoralis_Contig121.70.1 vs. uniprot
Match: A0A6S9EHW5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9EHW5_HETAK)

HSP 1 Score: 111 bits (277), Expect = 7.640e-28
Identity = 54/104 (51.92%), Postives = 68/104 (65.38%), Query Frame = 0
Query:   91 ADGGATPAGPTKMAAVLYTYVDGMEEKRAPHRSGHLDLLKNMSEEGSCLLGGALVEPCDGGIVLFSTPEKAREFVDNDPYVSSGLVTKYQIRDYMAVVGTMHTK 194
            A+    PA P K+ AV YTYV+ MEE+R   R+ HL+L+K     G+C++GGA +EP DGG +LF T E AREFV  DPYV +GLV  + IR YM V GT   K
Sbjct:   41 AENEPAPALPKKLFAVRYTYVENMEERRGAVRAPHLELIKEYEAAGTCVMGGAFIEPVDGGFLLFETEEAAREFVSRDPYVEAGLVPHHDIRAYMCVSGTAFNK 144          
BLAST of mRNA_P-littoralis_Contig121.70.1 vs. uniprot
Match: A9UWG7_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UWG7_MONBE)

HSP 1 Score: 103 bits (257), Expect = 5.630e-25
Identity = 47/104 (45.19%), Postives = 67/104 (64.42%), Query Frame = 0
Query:   89 MSADGGATPAGPTKMAAVLYTYVDGMEEKRAPHRSGHLDLLKNMSEEGSCLLGGALVEPCDGGIVLFSTPEKAREFVDNDPYVSSGLVTKYQIRDYMAVVGTMH 192
            M+   G   A P  +A + Y +V+ M EKR PHRS HL L ++ +  GS LLGGA   P D G ++F +P++AREF + DPYV   LV KY+IR++  VVG+++
Sbjct:   24 MTQGDGTAAATPVPLAVLKYFFVENMAEKRVPHRSAHLQLARDAARRGSLLLGGAAANPVDAGFLIFRSPQEAREFAEQDPYVRGELVRKYEIREWSVVVGSLY 127          
BLAST of mRNA_P-littoralis_Contig121.70.1 vs. uniprot
Match: A0A835ZJU7_9STRA (YCII domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJU7_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.710e-24
Identity = 44/84 (52.38%), Postives = 58/84 (69.05%), Query Frame = 0
Query:  108 YTYVDGMEEKRAPHRSGHLDLLKNMSEEGSCLLGGALVEPCDGGIVLFSTPEKAREFVDNDPYVSSGLVTKYQIRDYMAVVGTM 191
            YTYV+GM EKR PHR  HL +L  ++++G C+LGGA + P DG ++LF T   A  F   DPY  +GL+TK+ IRDY AV GT+
Sbjct:    8 YTYVEGMLEKRGPHRDAHLQMLGELTQKGECVLGGAFMNPADGAMLLFQTRAAAETFAAQDPYSKAGLITKFNIRDYDAVTGTI 91          
BLAST of mRNA_P-littoralis_Contig121.70.1 vs. uniprot
Match: A0A059LFT5_9CHLO (YCII domain-containing protein n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LFT5_9CHLO)

HSP 1 Score: 91.7 bits (226), Expect = 2.380e-20
Identity = 43/86 (50.00%), Postives = 57/86 (66.28%), Query Frame = 0
Query:  106 VLYTYVDGMEEKRAPHRSGHLDLLKNMSEEGSCLLGGALVEPCDGGIVLFS--TPEKAREFVDNDPYVSSGLVTKYQIRDYMAVVG 189
            ++Y YVDGM EKR P R  HL L   MS+EG  ++GGAL +P D GI++F   T E+   F   DPYV + LVT +++R YM+VVG
Sbjct:   44 LIYNYVDGMLEKRTPFRDAHLKLAGGMSDEGKLMMGGALTDPVDTGILIFRNMTKEEVESFAKRDPYVLNNLVTSWKVRQYMSVVG 129          
BLAST of mRNA_P-littoralis_Contig121.70.1 vs. uniprot
Match: A0A7S0EWB9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EWB9_9EUKA)

HSP 1 Score: 89.0 bits (219), Expect = 1.270e-19
Identity = 42/87 (48.28%), Postives = 57/87 (65.52%), Query Frame = 0
Query:  106 VLYTYVDGMEEKRAPHRSGHLDLLKNMSEEGSCLLGGALVEPCDGGIVLFSTP-EKAREFVDNDPYVSSGLVTKYQIRDYMAVVGTM 191
            +LYTY D   EKRAPHRS HL   +   + G  LLGGAL +P DGG++LF+   E A  F  +DPY  +G+VT + +R++  VVG+M
Sbjct:    4 LLYTYTDNALEKRAPHRSAHLAAARAAEQRGQLLLGGALADPLDGGVLLFAGGREVAEAFATSDPYTQNGIVTDWTVREWTVVVGSM 90          
BLAST of mRNA_P-littoralis_Contig121.70.1 vs. uniprot
Match: A0A3B9ZKB7_9BACT (YCII domain-containing protein n=1 Tax=Prolixibacteraceae bacterium TaxID=2053594 RepID=A0A3B9ZKB7_9BACT)

HSP 1 Score: 87.4 bits (215), Expect = 3.510e-19
Identity = 39/86 (45.35%), Postives = 57/86 (66.28%), Query Frame = 0
Query:  106 VLYTYVDGMEEKRAPHRSGHLDLLKNMSEEGSCLLGGALVEPCDGGIVLFS--TPEKAREFVDNDPYVSSGLVTKYQIRDYMAVVG 189
            + Y  VD   E+RAP+R+ HL L +   + GS  +GGAL +P DG +++F   TPE A +F  NDPYV +GL+T +Q+R +M V+G
Sbjct:    5 LFYKTVDNYIERRAPYRTEHLGLAQQAVDNGSLFMGGALADPADGAVLIFKGDTPEVAEQFAKNDPYVKNGLITDWQVRPWMVVIG 90          
BLAST of mRNA_P-littoralis_Contig121.70.1 vs. uniprot
Match: L8HGR4_ACACA (YCIIrelated domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HGR4_ACACA)

HSP 1 Score: 87.4 bits (215), Expect = 2.960e-18
Identity = 49/112 (43.75%), Postives = 69/112 (61.61%), Query Frame = 0
Query:   85 GCLAMSADGGAT---PAGPT--KMAAVLYTYVDGMEEKRAPHRSGHLDLLKNMSEEGSCLLGGALVEPCDGGIVLFS-TPEKAREFVDNDPYVSSGLVTKYQIRDYMAVVGT 190
            G    S   GAT    A PT  K+ A++YTYVDG+ EKRAPHR+ HL  +K   ++G  + GGA  +   G IVL + T +    F  +DPYV +GLVT++++R ++ VVGT
Sbjct:   56 GARVFSTASGATGTPAAAPTVDKLHALMYTYVDGILEKRAPHRAAHLAYVKQYEDDGRLVAGGAWEDASGGLIVLRTDTADDVHRFAHDDPYVKAGLVTRHEVRPWLVVVGT 167          
BLAST of mRNA_P-littoralis_Contig121.70.1 vs. uniprot
Match: A0A8K1FKV5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKV5_PYTOL)

HSP 1 Score: 83.6 bits (205), Expect = 1.250e-17
Identity = 44/96 (45.83%), Postives = 58/96 (60.42%), Query Frame = 0
Query:   95 ATPAGPTKMAAVLYTYVDGMEEKRAPHRSGHLDLLKNMSEEGSCLLGGALVEPCDGGIVLFSTPEKAR--EFVDNDPYVSSGLVTKYQIRDYMAVV 188
            AT AG  K   + Y YV  + EKR P R+ HL    ++  +G  L+GGALV+P D G+ +FST  KA   EFV NDPYV + LVT + IR++   V
Sbjct:    2 ATSAGDKKFYILRYDYVSDILEKRTPFRAEHLQNAVDLKAQGKILMGGALVDPVDTGLFIFSTDNKAEIEEFVANDPYVKNNLVTAHSIREWAVAV 97          
BLAST of mRNA_P-littoralis_Contig121.70.1 vs. uniprot
Match: A0A2K1K357_PHYPA (YCII domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K357_PHYPA)

HSP 1 Score: 84.7 bits (208), Expect = 5.650e-17
Identity = 42/91 (46.15%), Postives = 58/91 (63.74%), Query Frame = 0
Query:  105 AVLYTYVDGMEEKRAPHRSGHLDLLKNMSEEGSCLLGGALVEPCDGGIVLF--STPEKAREFVDNDPYVSSGLVTKYQIRDYMAVVGTMHT 193
            A++Y YV  + EKR PHR GH+ + +    EG   LGGA  +P DG + +F  ++ ++ ++FVD DPYVS+GLVTK  IR   A VGT  T
Sbjct:  106 ALIYDYVPDILEKRGPHRPGHIAVAREEEAEGKMCLGGAWGDPVDGALFIFLVNSADEVQKFVDRDPYVSNGLVTKIDIRPVAAAVGTWIT 196          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig121.70.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEJ2_ECTSI3.920e-6764.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6S9EHW5_HETAK7.640e-2851.92Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A9UWG7_MONBE5.630e-2545.19Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A835ZJU7_9STRA1.710e-2452.38YCII domain-containing protein n=1 Tax=Tribonema m... [more]
A0A059LFT5_9CHLO2.380e-2050.00YCII domain-containing protein n=1 Tax=Helicospori... [more]
A0A7S0EWB9_9EUKA1.270e-1948.28Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
A0A3B9ZKB7_9BACT3.510e-1945.35YCII domain-containing protein n=1 Tax=Prolixibact... [more]
L8HGR4_ACACA2.960e-1843.75YCIIrelated domain containing protein n=1 Tax=Acan... [more]
A0A8K1FKV5_PYTOL1.250e-1745.83Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2K1K357_PHYPA5.650e-1746.15YCII domain-containing protein n=1 Tax=Physcomitri... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005545YCII-relatedPFAMPF03795YCIIcoord: 105..183
e-value: 1.2E-7
score: 32.1
NoneNo IPR availableGENE3D3.30.70.1060Dimeric alpha+beta barrelcoord: 104..188
e-value: 1.1E-13
score: 53.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..83
NoneNo IPR availablePANTHERPTHR33606PROTEIN YCIIcoord: 101..190
IPR011008Dimeric alpha-beta barrelSUPERFAMILY54909Dimeric alpha+beta barrelcoord: 104..187

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig121contigP-littoralis_Contig121:296197..300155 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig121.70.1mRNA_P-littoralis_Contig121.70.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig121 296185..301392 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig121.70.1 ID=prot_P-littoralis_Contig121.70.1|Name=mRNA_P-littoralis_Contig121.70.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=195bp
MNVLCKQLGLATRRASGAVRNLSAWLSLAAVIIVLVAAGESHAFVAPSAS
LPLAGASSAVSNTSGHERGGNTRPSSSSSSSSSSGCLAMSADGGATPAGP
TKMAAVLYTYVDGMEEKRAPHRSGHLDLLKNMSEEGSCLLGGALVEPCDG
GIVLFSTPEKAREFVDNDPYVSSGLVTKYQIRDYMAVVGTMHTK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005545YCII
IPR011008Dimeric_a/b-barrel