prot_P-littoralis_Contig1207.3.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1207.3.1
Unique Nameprot_P-littoralis_Contig1207.3.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length139
Homology
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BLAST of mRNA_P-littoralis_Contig1207.3.1 vs. uniprot
Match: A0A6H5KW71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW71_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 2.930e-8
Identity = 26/37 (70.27%), Postives = 28/37 (75.68%), Query Frame = 0 
Query:   61 CSHAGCTKQPSYGVAGTETAEFCSGHANDGMVDVVTK 97
            C HAGC KQP YGVAGT+  EFCSGH   GMVDVV +
Sbjct:    4 CGHAGCPKQPKYGVAGTKKREFCSGHRKAGMVDVVNR 40
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BLAST of mRNA_P-littoralis_Contig1207.3.1 vs. uniprot
Match: D8LCH9_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH9_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 4.510e-5
Identity = 20/36 (55.56%), Postives = 27/36 (75.00%), Query Frame = 0 
Query:   59 RECSHAGCTKQPSYGVAGTETAEFCSGHANDGMVDV 94
            + C H GCT + ++GV G++ AEFCS HA DGMVD+
Sbjct:    7 KTCDHVGCTTRANFGVPGSKKAEFCSRHAEDGMVDL 42
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1207.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KW71_9PHAE2.930e-870.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCH9_ECTSI4.510e-555.56EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 61..95
e-value: 1.1E-10
score: 41.9
coord: 99..133
e-value: 0.0043
score: 17.6
NoneNo IPR availableGENE3D6.10.140.110coord: 77..139
e-value: 1.7E-11
score: 46.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1207contigP-littoralis_Contig1207:5168..5584 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1207.3.1mRNA_P-littoralis_Contig1207.3.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1207 5168..5586 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1207.3.1 ID=prot_P-littoralis_Contig1207.3.1|Name=mRNA_P-littoralis_Contig1207.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=139bp
RQQQDDTCPRFLTRSYTFGGYRQRGLLPKSTKKVPAHPHRCSSRDRASIF
SFPPGRMGRECSHAGCTKQPSYGVAGTETAEFCSGHANDGMVDVVTKKCT
RLGCTKQPRYGMAGTKMAEFCSGQSKGGMVDVVTKKCTH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys