prot_P-littoralis_Contig1031.11.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1031.11.1
Unique Nameprot_P-littoralis_Contig1031.11.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length61
Homology
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BLAST of mRNA_P-littoralis_Contig1031.11.1 vs. uniprot
Match: A0A6H5JGV3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGV3_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 8.920e-17
Identity = 42/61 (68.85%), Postives = 47/61 (77.05%), Query Frame = 0 
Query:    1 SVAVQIANPSTDGVSLPAGLCLGQLFTVSVVAPDQLHVNAVANTPKSAAEISRARSELERP 61
            SV VQIANPS DGV L  GLCLGQL TV++  PDQLHVN+VANTP +  EI  A+SELE P
Sbjct:   59 SVVVQIANPSADGVRLYDGLCLGQLSTVTITEPDQLHVNSVANTPVTDDEIRHAKSELEEP 119
[Close]
BLAST of mRNA_P-littoralis_Contig1031.11.1 vs. uniprot
Match: A0A6H5JXY7_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY7_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 8.980e-17
Identity = 42/61 (68.85%), Postives = 47/61 (77.05%), Query Frame = 0 
Query:    1 SVAVQIANPSTDGVSLPAGLCLGQLFTVSVVAPDQLHVNAVANTPKSAAEISRARSELERP 61
            SV VQIANPS DGV L  GLCLGQL TV++  PDQLHVN+VANTP +  EI  A+SELE P
Sbjct:   60 SVVVQIANPSADGVRLYDGLCLGQLSTVTITEPDQLHVNSVANTPVTDDEIRHAKSELEEP 120
[Close]
BLAST of mRNA_P-littoralis_Contig1031.11.1 vs. uniprot
Match: A0A6H5K112_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K112_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 9.010e-17
Identity = 42/61 (68.85%), Postives = 47/61 (77.05%), Query Frame = 0 
Query:    1 SVAVQIANPSTDGVSLPAGLCLGQLFTVSVVAPDQLHVNAVANTPKSAAEISRARSELERP 61
            SV VQIANPS DGV L  GLCLGQL TV++  PDQLHVN+VANTP +  EI  A+SELE P
Sbjct:   59 SVVVQIANPSADGVRLYDGLCLGQLSTVTITEPDQLHVNSVANTPVTDDEIRHAKSELEEP 119
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1031.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JGV3_9PHAE8.920e-1768.85Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JXY7_9PHAE8.980e-1768.85RT_RNaseH domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K112_9PHAE9.010e-1768.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1031contigP-littoralis_Contig1031:65777..65959 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1031.11.1mRNA_P-littoralis_Contig1031.11.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1031 65777..65959 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1031.11.1 ID=prot_P-littoralis_Contig1031.11.1|Name=mRNA_P-littoralis_Contig1031.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=61bp
SVAVQIANPSTDGVSLPAGLCLGQLFTVSVVAPDQLHVNAVANTPKSAAE
ISRARSELERP
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