prot_P-littoralis_Contig103.13.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig103.13.1
Unique Nameprot_P-littoralis_Contig103.13.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length133
Homology
BLAST of mRNA_P-littoralis_Contig103.13.1 vs. uniprot
Match: A0A6H5KJM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJM0_9PHAE)

HSP 1 Score: 191 bits (484), Expect = 5.560e-59
Identity = 101/131 (77.10%), Postives = 111/131 (84.73%), Query Frame = 0
Query:    2 VGGAVVSHKSSTQPIVSNSSAESEYIATGEGVREALFVRHVLSFTAPETSGSTIKVLEDNEGAMALIQNPLGSGRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNLPE 132
            VGG VVSH S TQ IVS SS E+EYIATGEGV+ ALFVR VLSF APETSGS+I+VLEDN+GA+AL+QNPL SGR+KHIDVRFHFIR LFRSG ISV  V T EQHADVLTKALSR   +YHR+ LMNLPE
Sbjct:  102 VGGTVVSHGSKTQSIVSLSSTEAEYIATGEGVKGALFVRAVLSFIAPETSGSSIQVLEDNQGAIALVQNPLSSGRTKHIDVRFHFIRGLFRSGNISVNFVPTTEQHADVLTKALSRASLQYHRRKLMNLPE 232          
BLAST of mRNA_P-littoralis_Contig103.13.1 vs. uniprot
Match: A0A6H5KVG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVG7_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 4.440e-57
Identity = 93/131 (70.99%), Postives = 109/131 (83.21%), Query Frame = 0
Query:    2 VGGAVVSHKSSTQPIVSNSSAESEYIATGEGVREALFVRHVLSFTAPETSGSTIKVLEDNEGAMALIQNPLGSGRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNLPE 132
            +GG  VSH S +Q +V+ S+ E+EYIA GEGV+EALFVR VLSF APETS ++I+V EDN+GAM L+QNPL S RSKHIDVRFHFIRELF+SG ISVE+V T+EQHAD+LTKAL R    YHRKALMNLPE
Sbjct:    8 LGGTAVSHTSKSQRVVALSTTEAEYIAAGEGVKEALFVRAVLSFVAPETSWASIQVREDNQGAMTLVQNPLSSARSKHIDVRFHFIRELFKSGRISVEYVSTDEQHADLLTKALCRVKLEYHRKALMNLPE 138          
BLAST of mRNA_P-littoralis_Contig103.13.1 vs. uniprot
Match: A0A6H5L267_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L267_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 2.720e-56
Identity = 95/131 (72.52%), Postives = 111/131 (84.73%), Query Frame = 0
Query:    2 VGGAVVSHKSSTQPIVSNSSAESEYIATGEGVREALFVRHVLSFTAPETSGSTIKVLEDNEGAMALIQNPLGSGRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNLPE 132
            VGG VVSH S TQ IVS SS E+EYIA GEGV+EALFVR VLSF APETSGS+I+VLEDN+GA+AL+QNPL SGR+KHIDVR+HFIR LF SG I+V+ V T+EQHAD+LTKALSR   +YHR+ L+N PE
Sbjct:   97 VGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIQVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFGSGDIAVKFVPTKEQHADLLTKALSRASLQYHRRKLINFPE 227          
BLAST of mRNA_P-littoralis_Contig103.13.1 vs. uniprot
Match: A0A6H5L589_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L589_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 2.870e-56
Identity = 97/131 (74.05%), Postives = 110/131 (83.97%), Query Frame = 0
Query:    2 VGGAVVSHKSSTQPIVSNSSAESEYIATGEGVREALFVRHVLSFTAPETSGSTIKVLEDNEGAMALIQNPLGSGRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNLPE 132
            VGG V+SH S TQ IVS SS E+EYIA GEGV+EALFVR VLSF APETSGS+I+VLEDN+GAMAL+QNPL S RSKHIDVR+HFIR LFRSG IS++ V T EQHADVLTKA S+   +YHR+ LMNLPE
Sbjct:  251 VGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGEISIKFVSTSEQHADVLTKAHSKSSLQYHRRKLMNLPE 381          
BLAST of mRNA_P-littoralis_Contig103.13.1 vs. uniprot
Match: A0A6H5KGI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGI0_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 4.580e-56
Identity = 98/131 (74.81%), Postives = 111/131 (84.73%), Query Frame = 0
Query:    2 VGGAVVSHKSSTQPIVSNSSAESEYIATGEGVREALFVRHVLSFTAPETSGSTIKVLEDNEGAMALIQNPLGSGRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNLPE 132
            VGG VVSH S TQ I+S SS E+EYIA GEGV+EALFVR VLSF APETSGS+IKVLEDN+GA+AL+QNPL SGR+KHIDVR+HFI  LFRSG ISV+ V T EQHAD+LTKALSR   +YHR+ LMNLPE
Sbjct:  256 VGGTVVSHGSKTQSILSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIHGLFRSGDISVKFVPTTEQHADLLTKALSRANLQYHRRKLMNLPE 386          
BLAST of mRNA_P-littoralis_Contig103.13.1 vs. uniprot
Match: A0A6H5KR64_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR64_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 6.540e-56
Identity = 90/130 (69.23%), Postives = 106/130 (81.54%), Query Frame = 0
Query:    2 VGGAVVSHKSSTQPIVSNSSAESEYIATGEGVREALFVRHVLSFTAPETSGSTIKVLEDNEGAMALIQNPLGSGRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNLP 131
            VGG VV   + TQP+ + S+ E+EYIA GEGV+EALFVR VLSF APETSG+TI+V EDNEGA+AL+QNP  S RSKHIDVRFHFIRELF++G I+ ++V TEEQHAD+LTK L R    YHRKALMNLP
Sbjct:   82 VGGTVVCASTKTQPVTAQSTTEAEYIAAGEGVKEALFVRGVLSFIAPETSGATIRVREDNEGALALVQNPFSSARSKHIDVRFHFIRELFKAGKITADYVSTEEQHADMLTKVLGRGKLEYHRKALMNLP 211          
BLAST of mRNA_P-littoralis_Contig103.13.1 vs. uniprot
Match: A0A6H5KUQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUQ2_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 1.580e-55
Identity = 96/127 (75.59%), Postives = 106/127 (83.46%), Query Frame = 0
Query:    6 VVSHKSSTQPIVSNSSAESEYIATGEGVREALFVRHVLSFTAPETSGSTIKVLEDNEGAMALIQNPLGSGRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNLPE 132
            VVSH S TQ IVS SS  +EYIA GEGV+EALFVR VLSF APET GS+I+VLEDN+GAMAL+QNPL SGR+KHIDVRFHFIR LFRSG ISV+ V T EQHAD+LTKALSR   +YHR  LMNLPE
Sbjct:   92 VVSHGSKTQSIVSLSSTVAEYIAAGEGVKEALFVRAVLSFVAPETRGSSIQVLEDNQGAMALVQNPLNSGRTKHIDVRFHFIRGLFRSGEISVKFVPTTEQHADLLTKALSRASLQYHRPKLMNLPE 218          
BLAST of mRNA_P-littoralis_Contig103.13.1 vs. uniprot
Match: A0A6H5KGX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGX6_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 8.340e-55
Identity = 97/131 (74.05%), Postives = 111/131 (84.73%), Query Frame = 0
Query:    2 VGGAVVSHKSSTQPIVSNSSAESEYIATGEGVREALFVRHVLSFTAPETSGSTIKVLEDNEGAMALIQNPLGSGRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNLPE 132
            VGG V+SH S TQ IVS SS E+EYIA GEGV+EALFVR VLSF APETSGS+I+VLEDN+GAMAL+QNPL S RSKHIDVR+HFIR LFRSG IS++ V T EQHAD+LTKALS+   +YHR+ LMNLPE
Sbjct:  466 VGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKALSKSSLQYHRRKLMNLPE 596          
BLAST of mRNA_P-littoralis_Contig103.13.1 vs. uniprot
Match: A0A6H5K9K6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9K6_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 1.400e-54
Identity = 94/130 (72.31%), Postives = 109/130 (83.85%), Query Frame = 0
Query:    2 VGGAVVSHKSSTQPIVSNSSAESEYIATGEGVREALFVRHVLSFTAPETSGSTIKVLEDNEGAMALIQNPLGSGRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNLP 131
            VGG VVSH S TQ IVS S++E+EYIA GEGV+EALFVR VLSF APETSG+ IKVLEDN+GA++L+QNP  S RSKHIDVRFHFIRELF+SG ISVE++ T+EQHAD+LTKAL R     HR ALMN+P
Sbjct:  241 VGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMNIP 370          
BLAST of mRNA_P-littoralis_Contig103.13.1 vs. uniprot
Match: A0A6H5KQ05_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ05_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 4.730e-54
Identity = 96/131 (73.28%), Postives = 112/131 (85.50%), Query Frame = 0
Query:    2 VGGAVVSHKSSTQPIVSNSSAESEYIATGEGVREALFVRHVLSFTAPETSGSTIKVLEDNEGAMALIQNPLGSGRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNLPE 132
            VGG V+SH S+TQ IVS SS E+EYIA GEGV+EALFVR VLSF  PETSGS+I+VL+DN+GA+AL+QNPL SGR+KHIDVR+HFIR LFRSG ISV+ V T EQHAD+LTKALSR   +YHR+ LMNLPE
Sbjct:  373 VGGTVISHGSNTQSIVSVSSTEAEYIAAGEGVKEALFVRAVLSFVPPETSGSSIEVLDDNQGAIALVQNPLRSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMNLPE 503          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig103.13.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJM0_9PHAE5.560e-5977.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVG7_9PHAE4.440e-5770.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L267_9PHAE2.720e-5672.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L589_9PHAE2.870e-5674.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGI0_9PHAE4.580e-5674.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KR64_9PHAE6.540e-5669.23Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUQ2_9PHAE1.580e-5575.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGX6_9PHAE8.340e-5574.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9K6_9PHAE1.400e-5472.31Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KQ05_9PHAE4.730e-5473.28Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 56..127
NoneNo IPR availablePANTHERPTHR11439:SF343SUBFAMILY NOT NAMEDcoord: 56..127
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 1..118
e-value: 1.99869E-45
score: 142.607

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig103contigP-littoralis_Contig103:60702..61100 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig103.13.1mRNA_P-littoralis_Contig103.13.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig103 60638..61136 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig103.13.1 ID=prot_P-littoralis_Contig103.13.1|Name=mRNA_P-littoralis_Contig103.13.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=133bp
MVGGAVVSHKSSTQPIVSNSSAESEYIATGEGVREALFVRHVLSFTAPET
SGSTIKVLEDNEGAMALIQNPLGSGRSKHIDVRFHFIRELFRSGVISVEH
VRTEEQHADVLTKALSRDLFRYHRKALMNLPE*
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