prot_P-littoralis_Contig1028.8.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1028.8.1
Unique Nameprot_P-littoralis_Contig1028.8.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length72
Homology
BLAST of mRNA_P-littoralis_Contig1028.8.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 7.380e-39
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
Query:    1 MLVEKTHEAVEMYRDGVSEFDMNHFNMFLPVVLEGRDSPVPERKKLYEKSRNKGLDTIAVSVNARLSQLGR 71
            MLVEKTHEAVEMYRDGVSEFDMNHFNMFLPVVLEGRDSPVPERKKLYEKSRNKGLDTIAVSVNARLSQLGR
Sbjct: 2316 MLVEKTHEAVEMYRDGVSEFDMNHFNMFLPVVLEGRDSPVPERKKLYEKSRNKGLDTIAVSVNARLSQLGR 2386          
BLAST of mRNA_P-littoralis_Contig1028.8.1 vs. uniprot
Match: A0A6H5KC66_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC66_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 3.530e-37
Identity = 68/71 (95.77%), Postives = 69/71 (97.18%), Query Frame = 0
Query:    1 MLVEKTHEAVEMYRDGVSEFDMNHFNMFLPVVLEGRDSPVPERKKLYEKSRNKGLDTIAVSVNARLSQLGR 71
            MLVEKTHEAVEMY+DGVSEFDMNHFNMFLPVVLEGRDS VPERKKLYEK RNKGLDTIAVSVNARLSQLGR
Sbjct:  188 MLVEKTHEAVEMYKDGVSEFDMNHFNMFLPVVLEGRDSSVPERKKLYEKRRNKGLDTIAVSVNARLSQLGR 258          
BLAST of mRNA_P-littoralis_Contig1028.8.1 vs. uniprot
Match: Q8QN59_ESV1K (EsV-1-231 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN59_ESV1K)

HSP 1 Score: 72.4 bits (176), Expect = 2.970e-13
Identity = 34/70 (48.57%), Postives = 49/70 (70.00%), Query Frame = 0
Query:    1 MLVEKTHEAVEMYRDGVSEFDMNHFNMFLPVVLEGRDSPVPERKKLYEKSRNKGLDTIAVSVNARLSQLG 70
            +LVEKT EAV M+R  +  +  +HF+M+   +L  +DS VPE++KLYE+ RNK L+ IAVSV   L ++G
Sbjct:  285 ILVEKTREAVSMFRQTIPAYYFDHFDMYSDSILAHKDSAVPEQRKLYERRRNKVLNNIAVSVTDNLCRMG 354          
BLAST of mRNA_P-littoralis_Contig1028.8.1 vs. uniprot
Match: D8LP42_ECTSI (EsV-1-231 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP42_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 8.700e-13
Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = 0
Query:    1 MLVEKTHEAVEMYRDGVSEFDMNHFNMFLPVVLEGRDSPVPERKKLYEKSRNKGLDTIAVSVNARLSQLG 70
            +LVEKT EAV M+R  +  +  +HF+M    +L  +DS VPE++KLYE+ RNK L+ IAVSV   L ++G
Sbjct:  187 ILVEKTREAVSMFRQTIPAYYFDHFDMHSDSILAYKDSAVPEQRKLYERRRNKVLNNIAVSVTDNLCRMG 256          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1028.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JH58_9PHAE7.380e-39100.00Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KC66_9PHAE3.530e-3795.77Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
Q8QN59_ESV1K2.970e-1348.57EsV-1-231 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
D8LP42_ECTSI8.700e-1348.57EsV-1-231 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1028contigP-littoralis_Contig1028:41442..41657 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1028.8.1mRNA_P-littoralis_Contig1028.8.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1028 41442..42206 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1028.8.1 ID=prot_P-littoralis_Contig1028.8.1|Name=mRNA_P-littoralis_Contig1028.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=72bp
MLVEKTHEAVEMYRDGVSEFDMNHFNMFLPVVLEGRDSPVPERKKLYEKS
RNKGLDTIAVSVNARLSQLGR*
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