prot_P-littoralis_Contig102.13.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig102.13.1
Unique Name	prot_P-littoralis_Contig102.13.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	313

Homology

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BLAST of mRNA_P-littoralis_Contig102.13.1 vs. uniprot
Match: D7FQW3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQW3_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 4.080e-65
Identity = 138/245 (56.33%), Postives = 153/245 (62.45%), Query Frame = 0

Query:   24 ATAAFG-QGICEHHNALAACFIGPAITTAGSVSRPESASAAKSGVQPSSRQQXXXXXXXXXXRTLSTGVDASSPLALRILLRRALXXXXXXXXXXXXXXXXXXXAAATDPPQRTGADVDNLFRLEVAQRMREMKLMTQSGVGPLAPVXXXXXXXXXXXTLAETLPTNKLEGDAVALEHQISLLSMRITSIADHLKTTPNDAISRKGLVVLVKRRRQLLQTLRHRDKGRWLTTTESLGLRQRAGAP 267
            ATAA G  G       L +CF+GPA+      +R ES  AA S  Q   +QQ             +TG D  SPLA R+LLRRAL                    AAT P  RT ADV +LFRLEVAQRM+EMKLMTQ GVGPLAPV           +LAETL  NKLEGDA ALEHQISLLS RI SIADHLKTTP DA+SRKGLVVLVKRRR+LL+TLRHRD  RW+ TT +LGLRQR  AP
Sbjct:   22 ATAALGADGSDRRSRPLTSCFVGPAVAAGSIATRSESTPAASSKEQ---QQQHGRP---------TTGKDTCSPLARRVLLRRALARPKARAGAESSSP------AATRPGSRTAADVGSLFRLEVAQRMKEMKLMTQPGVGPLAPVAGPAAAAA---SLAETLAKNKLEGDAAALEHQISLLSARIASIADHLKTTPTDAVSRKGLVVLVKRRRRLLETLRHRDNDRWMATTAALGLRQRPDAP 245

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BLAST of mRNA_P-littoralis_Contig102.13.1 vs. uniprot
Match: A0A845BDI4_9PROT (30S ribosomal protein S15 n=1 Tax=Roseomonas coralli TaxID=2545983 RepID=A0A845BDI4_9PROT)

HSP 1 Score: 65.9 bits (159), Expect = 3.620e-10
Identity = 35/70 (50.00%), Postives = 51/70 (72.86%), Query Frame = 0

Query:  193 GDAVALEHQISLLSMRITSIADHLKTTPNDAISRKGLVVLVKRRRQLLQTLRHRDKGRWLTTTESLGLRQ 262
            GD  + E Q++LLS RI+S+ +HLKT P D  SR+GL+VLV +RR LL  L+ +++GR+ +  E LGLR+
Sbjct:   21 GDTGSPEVQVALLSERISSLTEHLKTHPKDFHSRRGLLVLVGQRRGLLDYLKRKNQGRYASLIERLGLRR 90

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BLAST of mRNA_P-littoralis_Contig102.13.1 vs. uniprot
Match: A0A1I1NZ65_9ACTN (30S ribosomal protein S15 n=6 Tax=Streptomyces TaxID=1883 RepID=A0A1I1NZ65_9ACTN)

HSP 1 Score: 63.5 bits (153), Expect = 2.960e-9
Identity = 39/83 (46.99%), Postives = 55/83 (66.27%), Query Frame = 0

Query:  192 EGDAVALEHQISLLSMRITSIADHLKTTPNDAISRKGLVVLVKRRRQLLQTLRHRDKGRWLTTTESLGLRQRAGAPPVVAGGA 274
            EGD  + E Q++LLS RI+ + +HLKT  +D  SR+GL++LV RRR+LLQ L  +D  R+ T  + LG+R+ A      AGGA
Sbjct:   20 EGDTGSPEVQVALLSRRISDLTEHLKTHKHDHHSRRGLLLLVGRRRRLLQYLAKKDITRFRTLVDRLGIRRGA------AGGA 96

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BLAST of mRNA_P-littoralis_Contig102.13.1 vs. uniprot
Match: A0A1F2QW77_9BACT (30S ribosomal protein S15 n=2 Tax=unclassified Acidobacteria TaxID=305072 RepID=A0A1F2QW77_9BACT)

HSP 1 Score: 63.2 bits (152), Expect = 3.330e-9
Identity = 33/70 (47.14%), Postives = 47/70 (67.14%), Query Frame = 0

Query:  193 GDAVALEHQISLLSMRITSIADHLKTTPNDAISRKGLVVLVKRRRQLLQTLRHRDKGRWLTTTESLGLRQ 262
            GD  + E QI+LLS RI+++ DH KT   D  SR+GL+++V RRR+LL  L+  D GR+    + LGLR+
Sbjct:   20 GDTGSPEVQIALLSERISTLTDHFKTHRKDHASRRGLIMMVSRRRRLLDYLKDNDSGRYQGIVDKLGLRK 89

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BLAST of mRNA_P-littoralis_Contig102.13.1 vs. uniprot
Match: A0A6L5FW19_9ACTN (30S ribosomal protein S15 n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A6L5FW19_9ACTN)

HSP 1 Score: 63.2 bits (152), Expect = 3.330e-9
Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = 0

Query:  192 EGDAVALEHQISLLSMRITSIADHLKTTPNDAISRKGLVVLVKRRRQLLQTLRHRDKGRWLTTTESLGLRQ 262
            EGD  + E Q+++L+ RIT + +HLKT P D  SR+GL++LV RRR+LL+ LR  D  R+      LGLR+
Sbjct:   19 EGDTGSPEVQVAVLTRRITELTEHLKTHPKDHHSRRGLLLLVGRRRRLLEYLRREDIERYRALIAKLGLRR 89

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BLAST of mRNA_P-littoralis_Contig102.13.1 vs. uniprot
Match: A0A0D6MPH5_9PROT (30S ribosomal protein S15 n=1 Tax=Tanticharoenia sakaeratensis NBRC 103193 TaxID=1231623 RepID=A0A0D6MPH5_9PROT)

HSP 1 Score: 62.8 bits (151), Expect = 4.590e-9
Identity = 33/69 (47.83%), Postives = 48/69 (69.57%), Query Frame = 0

Query:  194 DAVALEHQISLLSMRITSIADHLKTTPNDAISRKGLVVLVKRRRQLLQTLRHRDKGRWLTTTESLGLRQ 262
            D  + E Q++LL+ RI ++ DHLKT   D  SR+GL++LV RRR +L  L+ +D+GR+ T  E LGLR+
Sbjct:   21 DTGSPEVQVALLTERIVNLTDHLKTHAKDYHSRRGLLMLVGRRRSMLDYLKRKDQGRYQTLIERLGLRR 89

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BLAST of mRNA_P-littoralis_Contig102.13.1 vs. uniprot
Match: A0A2V6SZX4_9BACT (30S ribosomal protein S15 n=2 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6SZX4_9BACT)

HSP 1 Score: 62.4 bits (150), Expect = 6.320e-9
Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 0

Query:  192 EGDAVALEHQISLLSMRITSIADHLKTTPNDAISRKGLVVLVKRRRQLLQTLRHRDKGRWLTTTESLGLRQ 262
            +GD  + E QI+LLS RI  + DH KT   D  SR+GL++L+ +RR LL+ LR +D  R+   TE LG+R+
Sbjct:   19 DGDTGSPEVQIALLSERINGLTDHFKTHQKDHHSRRGLLMLIGKRRGLLEYLRKKDSERYRVVTEKLGIRR 89

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BLAST of mRNA_P-littoralis_Contig102.13.1 vs. uniprot
Match: A0A132N350_9ACTN (30S ribosomal protein S15 n=1 Tax=Carbonactinospora thermoautotrophica TaxID=1469144 RepID=A0A132N350_9ACTN)

HSP 1 Score: 62.4 bits (150), Expect = 6.320e-9
Identity = 34/71 (47.89%), Postives = 50/71 (70.42%), Query Frame = 0

Query:  192 EGDAVALEHQISLLSMRITSIADHLKTTPNDAISRKGLVVLVKRRRQLLQTLRHRDKGRWLTTTESLGLRQ 262
            EGD  + E Q++LL+ RI+ + +HLKT  +D  SR+GL++LV RRR+LLQ L+ +D  R+    E LGLR+
Sbjct:   19 EGDTGSPEVQVALLTKRISDLTEHLKTHKHDHHSRRGLLLLVGRRRRLLQYLQKKDINRYRQLIERLGLRR 89

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BLAST of mRNA_P-littoralis_Contig102.13.1 vs. uniprot
Match: A0A0F7NCS1_9ACTN (30S ribosomal protein S15 n=15 Tax=Streptomyces TaxID=1883 RepID=A0A0F7NCS1_9ACTN)

HSP 1 Score: 62.4 bits (150), Expect = 7.360e-9
Identity = 33/73 (45.21%), Postives = 51/73 (69.86%), Query Frame = 0

Query:  192 EGDAVALEHQISLLSMRITSIADHLKTTPNDAISRKGLVVLVKRRRQLLQTLRHRDKGRWLTTTESLGLRQRA 264
            EGD  + E Q+++L+ RI+ + +HLKT  +D  SR+GL++LV RRR+LLQ L  +D  R+ T  + LG+R+ A
Sbjct:   19 EGDTGSPEVQVAMLTQRISDLTEHLKTHKHDHHSRRGLLLLVGRRRRLLQYLAKKDIARFRTLVDRLGIRRGA 91

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BLAST of mRNA_P-littoralis_Contig102.13.1 vs. uniprot
Match: A0A544ZMY6_9ACTN (30S ribosomal protein S15 n=37 Tax=Streptosporangiaceae TaxID=2004 RepID=A0A544ZMY6_9ACTN)

HSP 1 Score: 62.0 bits (149), Expect = 8.700e-9
Identity = 35/71 (49.30%), Postives = 51/71 (71.83%), Query Frame = 0

Query:  192 EGDAVALEHQISLLSMRITSIADHLKTTPNDAISRKGLVVLVKRRRQLLQTLRHRDKGRWLTTTESLGLRQ 262
            EGD  + E QI+LLS RI+ + +HLKT  +D  SR+GL++LV RRR+LL+ L+ +D  R+ +  E LGLR+
Sbjct:   19 EGDTGSPEVQIALLSKRISDLTEHLKTHKHDHHSRRGLLLLVGRRRRLLKYLQAKDITRYRSLIERLGLRR 89

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig102.13.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig102.13.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FQW3_ECTSI	4.080e-65	56.33	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A845BDI4_9PROT	3.620e-10	50.00	30S ribosomal protein S15 n=1 Tax=Roseomonas coral...	[more]
A0A1I1NZ65_9ACTN	2.960e-9	46.99	30S ribosomal protein S15 n=6 Tax=Streptomyces Tax...	[more]
A0A1F2QW77_9BACT	3.330e-9	47.14	30S ribosomal protein S15 n=2 Tax=unclassified Aci...	[more]
A0A6L5FW19_9ACTN	3.330e-9	47.89	30S ribosomal protein S15 n=1 Tax=Actinomycetia ba...	[more]
A0A0D6MPH5_9PROT	4.590e-9	47.83	30S ribosomal protein S15 n=1 Tax=Tanticharoenia s...	[more]
A0A2V6SZX4_9BACT	6.320e-9	46.48	30S ribosomal protein S15 n=2 Tax=Candidatus Rokub...	[more]
A0A132N350_9ACTN	6.320e-9	47.89	30S ribosomal protein S15 n=1 Tax=Carbonactinospor...	[more]
A0A0F7NCS1_9ACTN	7.360e-9	45.21	30S ribosomal protein S15 n=15 Tax=Streptomyces Ta...	[more]
A0A544ZMY6_9ACTN	8.700e-9	49.30	30S ribosomal protein S15 n=37 Tax=Streptosporangi...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000589	Ribosomal protein S15	SMART	SM01387	Ribosomal_S15_2	coord: 182..261 e-value: 6.8E-9 score: 45.6
IPR000589	Ribosomal protein S15	PFAM	PF00312	Ribosomal_S15	coord: 192..261 e-value: 2.8E-14 score: 53.1
None	No IPR available	GENE3D	1.10.287.10		coord: 180..264 e-value: 1.6E-15 score: 58.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 258..312
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 276..291
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 298..312
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..138
IPR009068	S15/NS1, RNA-binding	SUPERFAMILY	47060	S15/NS1 RNA-binding domain	coord: 192..261

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig102	contig	P-littoralis_Contig102:51264..62320 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig102.13.1	mRNA_P-littoralis_Contig102.13.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig102 49562..62615 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig102.13.1 ID=prot_P-littoralis_Contig102.13.1|Name=mRNA_P-littoralis_Contig102.13.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=313bp
MAKRLGSPRKMQEALACVVLLAFATAAFGQGICEHHNALAACFIGPAITT
AGSVSRPESASAAKSGVQPSSRQQQQEQQQQRQPRTLSTGVDASSPLALR
ILLRRALAKPKPRATTGSGSGSGSRSAAATDPPQRTGADVDNLFRLEVAQ
RMREMKLMTQSGVGPLAPVAGAAAAAAAAATLAETLPTNKLEGDAVALEH
QISLLSMRITSIADHLKTTPNDAISRKGLVVLVKRRRQLLQTLRHRDKGR
WLTTTESLGLRQRAGAPPVVAGGAGEGEWRREEEGRAARRERRRDRGRRR
RREEEEGGEGRR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000589	Ribosomal_S15
IPR009068	S15_NS1_RNA-bd