mRNA_P-littoralis_Contig102.13.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig102.13.1
Unique NamemRNA_P-littoralis_Contig102.13.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig102.13.1 vs. uniprot
Match: D7FQW3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQW3_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 1.270e-59
Identity = 138/245 (56.33%), Postives = 153/245 (62.45%), Query Frame = 2 
Query:  365 ATAAFG-QGICEHHNALAACFIGPAITTAGSVSRPESASAAKSGVQPSSRQQXXXXXXXXXXRTLSTGVDASSPLALRILLRRALXXXXXXXXXXXXXXXXXXXAAATDPPQRTGADVDNLFRLEVAQRMREMKLMTQSGVGPLAPVXXXXXXXXXXXTLAETLPTNKLEGDAVALEHQISLLSMRITSIADHLKTTPNDAISRKGLVVLVKRRRQLLQTLRHRDKGRWLTTTESLGLRQRAGAP 1096
            ATAA G  G       L +CF+GPA+      +R ES  AA S  Q   +QQ             +TG D  SPLA R+LLRRAL                    AAT P  RT ADV +LFRLEVAQRM+EMKLMTQ GVGPLAPV           +LAETL  NKLEGDA ALEHQISLLS RI SIADHLKTTP DA+SRKGLVVLVKRRR+LL+TLRHRD  RW+ TT +LGLRQR  AP
Sbjct:   22 ATAALGADGSDRRSRPLTSCFVGPAVAAGSIATRSESTPAASSKEQ---QQQHGRP---------TTGKDTCSPLARRVLLRRALARPKARAGAESSSP------AATRPGSRTAADVGSLFRLEVAQRMKEMKLMTQPGVGPLAPVAGPAAAAA---SLAETLAKNKLEGDAAALEHQISLLSARIASIADHLKTTPTDAVSRKGLVVLVKRRRRLLETLRHRDNDRWMATTAALGLRQRPDAP 245
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BLAST of mRNA_P-littoralis_Contig102.13.1 vs. uniprot
Match: A0A845BDI4_9PROT (30S ribosomal protein S15 n=1 Tax=Roseomonas coralli TaxID=2545983 RepID=A0A845BDI4_9PROT)

HSP 1 Score: 65.9 bits (159), Expect = 1.570e-9
Identity = 35/70 (50.00%), Postives = 51/70 (72.86%), Query Frame = 2 
Query:  872 GDAVALEHQISLLSMRITSIADHLKTTPNDAISRKGLVVLVKRRRQLLQTLRHRDKGRWLTTTESLGLRQ 1081
            GD  + E Q++LLS RI+S+ +HLKT P D  SR+GL+VLV +RR LL  L+ +++GR+ +  E LGLR+
Sbjct:   21 GDTGSPEVQVALLSERISSLTEHLKTHPKDFHSRRGLLVLVGQRRGLLDYLKRKNQGRYASLIERLGLRR 90
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BLAST of mRNA_P-littoralis_Contig102.13.1 vs. uniprot
Match: A0A1I1NZ65_9ACTN (30S ribosomal protein S15 n=6 Tax=Streptomyces TaxID=1883 RepID=A0A1I1NZ65_9ACTN)

HSP 1 Score: 63.5 bits (153), Expect = 1.240e-8
Identity = 39/83 (46.99%), Postives = 55/83 (66.27%), Query Frame = 2 
Query:  869 EGDAVALEHQISLLSMRITSIADHLKTTPNDAISRKGLVVLVKRRRQLLQTLRHRDKGRWLTTTESLGLRQRAGAPPVVAGGA 1117
            EGD  + E Q++LLS RI+ + +HLKT  +D  SR+GL++LV RRR+LLQ L  +D  R+ T  + LG+R+ A      AGGA
Sbjct:   20 EGDTGSPEVQVALLSRRISDLTEHLKTHKHDHHSRRGLLLLVGRRRRLLQYLAKKDITRFRTLVDRLGIRRGA------AGGA 96
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BLAST of mRNA_P-littoralis_Contig102.13.1 vs. uniprot
Match: A0A1F2QW77_9BACT (30S ribosomal protein S15 n=2 Tax=unclassified Acidobacteria TaxID=305072 RepID=A0A1F2QW77_9BACT)

HSP 1 Score: 63.2 bits (152), Expect = 1.360e-8
Identity = 33/70 (47.14%), Postives = 47/70 (67.14%), Query Frame = 2 
Query:  872 GDAVALEHQISLLSMRITSIADHLKTTPNDAISRKGLVVLVKRRRQLLQTLRHRDKGRWLTTTESLGLRQ 1081
            GD  + E QI+LLS RI+++ DH KT   D  SR+GL+++V RRR+LL  L+  D GR+    + LGLR+
Sbjct:   20 GDTGSPEVQIALLSERISTLTDHFKTHRKDHASRRGLIMMVSRRRRLLDYLKDNDSGRYQGIVDKLGLRK 89
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BLAST of mRNA_P-littoralis_Contig102.13.1 vs. uniprot
Match: A0A6L5FW19_9ACTN (30S ribosomal protein S15 n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A6L5FW19_9ACTN)

HSP 1 Score: 63.2 bits (152), Expect = 1.360e-8
Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = 2 
Query:  869 EGDAVALEHQISLLSMRITSIADHLKTTPNDAISRKGLVVLVKRRRQLLQTLRHRDKGRWLTTTESLGLRQ 1081
            EGD  + E Q+++L+ RIT + +HLKT P D  SR+GL++LV RRR+LL+ LR  D  R+      LGLR+
Sbjct:   19 EGDTGSPEVQVAVLTRRITELTEHLKTHPKDHHSRRGLLLLVGRRRRLLEYLRREDIERYRALIAKLGLRR 89
[Close]
BLAST of mRNA_P-littoralis_Contig102.13.1 vs. uniprot
Match: A0A0D6MPH5_9PROT (30S ribosomal protein S15 n=1 Tax=Tanticharoenia sakaeratensis NBRC 103193 TaxID=1231623 RepID=A0A0D6MPH5_9PROT)

HSP 1 Score: 62.8 bits (151), Expect = 1.850e-8
Identity = 33/69 (47.83%), Postives = 48/69 (69.57%), Query Frame = 2 
Query:  875 DAVALEHQISLLSMRITSIADHLKTTPNDAISRKGLVVLVKRRRQLLQTLRHRDKGRWLTTTESLGLRQ 1081
            D  + E Q++LL+ RI ++ DHLKT   D  SR+GL++LV RRR +L  L+ +D+GR+ T  E LGLR+
Sbjct:   21 DTGSPEVQVALLTERIVNLTDHLKTHAKDYHSRRGLLMLVGRRRSMLDYLKRKDQGRYQTLIERLGLRR 89
[Close]
BLAST of mRNA_P-littoralis_Contig102.13.1 vs. uniprot
Match: A0A2V6SZX4_9BACT (30S ribosomal protein S15 n=2 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6SZX4_9BACT)

HSP 1 Score: 62.4 bits (150), Expect = 2.530e-8
Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 2 
Query:  869 EGDAVALEHQISLLSMRITSIADHLKTTPNDAISRKGLVVLVKRRRQLLQTLRHRDKGRWLTTTESLGLRQ 1081
            +GD  + E QI+LLS RI  + DH KT   D  SR+GL++L+ +RR LL+ LR +D  R+   TE LG+R+
Sbjct:   19 DGDTGSPEVQIALLSERINGLTDHFKTHQKDHHSRRGLLMLIGKRRGLLEYLRKKDSERYRVVTEKLGIRR 89
[Close]
BLAST of mRNA_P-littoralis_Contig102.13.1 vs. uniprot
Match: A0A132N350_9ACTN (30S ribosomal protein S15 n=1 Tax=Carbonactinospora thermoautotrophica TaxID=1469144 RepID=A0A132N350_9ACTN)

HSP 1 Score: 62.4 bits (150), Expect = 2.530e-8
Identity = 34/71 (47.89%), Postives = 50/71 (70.42%), Query Frame = 2 
Query:  869 EGDAVALEHQISLLSMRITSIADHLKTTPNDAISRKGLVVLVKRRRQLLQTLRHRDKGRWLTTTESLGLRQ 1081
            EGD  + E Q++LL+ RI+ + +HLKT  +D  SR+GL++LV RRR+LLQ L+ +D  R+    E LGLR+
Sbjct:   19 EGDTGSPEVQVALLTKRISDLTEHLKTHKHDHHSRRGLLLLVGRRRRLLQYLQKKDINRYRQLIERLGLRR 89
[Close]
BLAST of mRNA_P-littoralis_Contig102.13.1 vs. uniprot
Match: A0A0F7NCS1_9ACTN (30S ribosomal protein S15 n=15 Tax=Streptomyces TaxID=1883 RepID=A0A0F7NCS1_9ACTN)

HSP 1 Score: 62.4 bits (150), Expect = 2.980e-8
Identity = 33/73 (45.21%), Postives = 51/73 (69.86%), Query Frame = 2 
Query:  869 EGDAVALEHQISLLSMRITSIADHLKTTPNDAISRKGLVVLVKRRRQLLQTLRHRDKGRWLTTTESLGLRQRA 1087
            EGD  + E Q+++L+ RI+ + +HLKT  +D  SR+GL++LV RRR+LLQ L  +D  R+ T  + LG+R+ A
Sbjct:   19 EGDTGSPEVQVAMLTQRISDLTEHLKTHKHDHHSRRGLLLLVGRRRRLLQYLAKKDIARFRTLVDRLGIRRGA 91
[Close]
BLAST of mRNA_P-littoralis_Contig102.13.1 vs. uniprot
Match: A0A544ZMY6_9ACTN (30S ribosomal protein S15 n=37 Tax=Streptosporangiaceae TaxID=2004 RepID=A0A544ZMY6_9ACTN)

HSP 1 Score: 62.0 bits (149), Expect = 3.460e-8
Identity = 35/71 (49.30%), Postives = 51/71 (71.83%), Query Frame = 2 
Query:  869 EGDAVALEHQISLLSMRITSIADHLKTTPNDAISRKGLVVLVKRRRQLLQTLRHRDKGRWLTTTESLGLRQ 1081
            EGD  + E QI+LLS RI+ + +HLKT  +D  SR+GL++LV RRR+LL+ L+ +D  R+ +  E LGLR+
Sbjct:   19 EGDTGSPEVQIALLSKRISDLTEHLKTHKHDHHSRRGLLLLVGRRRRLLKYLQAKDITRYRSLIERLGLRR 89
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig102.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQW3_ECTSI1.270e-5956.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A845BDI4_9PROT1.570e-950.0030S ribosomal protein S15 n=1 Tax=Roseomonas coral... [more]
A0A1I1NZ65_9ACTN1.240e-846.9930S ribosomal protein S15 n=6 Tax=Streptomyces Tax... [more]
A0A1F2QW77_9BACT1.360e-847.1430S ribosomal protein S15 n=2 Tax=unclassified Aci... [more]
A0A6L5FW19_9ACTN1.360e-847.8930S ribosomal protein S15 n=1 Tax=Actinomycetia ba... [more]
A0A0D6MPH5_9PROT1.850e-847.8330S ribosomal protein S15 n=1 Tax=Tanticharoenia s... [more]
A0A2V6SZX4_9BACT2.530e-846.4830S ribosomal protein S15 n=2 Tax=Candidatus Rokub... [more]
A0A132N350_9ACTN2.530e-847.8930S ribosomal protein S15 n=1 Tax=Carbonactinospor... [more]
A0A0F7NCS1_9ACTN2.980e-845.2130S ribosomal protein S15 n=15 Tax=Streptomyces Ta... [more]
A0A544ZMY6_9ACTN3.460e-849.3030S ribosomal protein S15 n=37 Tax=Streptosporangi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig102contigP-littoralis_Contig102:49562..62615 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1137269.AZWL01000016_gene239
Preferred namerpsO
PFAMsRibosomal_S15
Model size2936
Max annot lvl201174|Actinobacteria
KEGG koko:K02956
KEGG Pathwayko03010,map03010
KEGG ModuleM00178,M00179
Hectar predicted targeting categorysignal peptide
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0015935,GO:0016020,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904
Exons3
Evalue1.28e-10
EggNOG OGsCOG0184@1|root,COG0184@2|Bacteria,2IQA0@201174|Actinobacteria
Ec32 ortholog descriptionS15/NS1, RNA-binding
Ec32 orthologEc-02_003120.1
DescriptionForms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
Cds size939
COG categoryJ
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789357.886016-UTR-P-littoralis_Contig102:49561..512631680789357.886016-UTR-P-littoralis_Contig102:49561..51263Pylaiella littoralis U1_48UTRP-littoralis_Contig102 49562..51263 -
1680789357.9326172-UTR-P-littoralis_Contig102:62320..626151680789357.9326172-UTR-P-littoralis_Contig102:62320..62615Pylaiella littoralis U1_48UTRP-littoralis_Contig102 62321..62615 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789357.8980908-CDS-P-littoralis_Contig102:51263..515511680789357.8980908-CDS-P-littoralis_Contig102:51263..51551Pylaiella littoralis U1_48CDSP-littoralis_Contig102 51264..51551 -
1680789357.9081163-CDS-P-littoralis_Contig102:52689..529061680789357.9081163-CDS-P-littoralis_Contig102:52689..52906Pylaiella littoralis U1_48CDSP-littoralis_Contig102 52690..52906 -
1680789357.9243429-CDS-P-littoralis_Contig102:61886..623201680789357.9243429-CDS-P-littoralis_Contig102:61886..62320Pylaiella littoralis U1_48CDSP-littoralis_Contig102 61887..62320 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig102.13.1prot_P-littoralis_Contig102.13.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig102 51264..62320 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig102.13.1

>prot_P-littoralis_Contig102.13.1 ID=prot_P-littoralis_Contig102.13.1|Name=mRNA_P-littoralis_Contig102.13.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=313bp
MAKRLGSPRKMQEALACVVLLAFATAAFGQGICEHHNALAACFIGPAITT
AGSVSRPESASAAKSGVQPSSRQQQQEQQQQRQPRTLSTGVDASSPLALR
ILLRRALAKPKPRATTGSGSGSGSRSAAATDPPQRTGADVDNLFRLEVAQ
RMREMKLMTQSGVGPLAPVAGAAAAAAAAATLAETLPTNKLEGDAVALEH
QISLLSMRITSIADHLKTTPNDAISRKGLVVLVKRRRQLLQTLRHRDKGR
WLTTTESLGLRQRAGAPPVVAGGAGEGEWRREEEGRAARRERRRDRGRRR
RREEEEGGEGRR*
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mRNA from alignment at P-littoralis_Contig102:49562..62615-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig102.13.1 ID=mRNA_P-littoralis_Contig102.13.1|Name=mRNA_P-littoralis_Contig102.13.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=13054bp|location=Sequence derived from alignment at P-littoralis_Contig102:49562..62615- (Pylaiella littoralis U1_48)
CGCCTTTTGACCAAAAAAGAAACCTCTCAAAAAAAATATAATCACGTCAC
TATCCATGACTCCCCTCCCCTGAGACGCTACGTCAGCCTACAACACAGCG
GTGATACAACGCCGCTTCCAGTCACCCTCGTTGCTGCGTGTAACCTTTTG
CCTGTTCCTCCTAAGCACGAGAGACTGCAAGTTACAGCTCGATTCTACAG
CTGCCAGATAAACGTGAGGGAAATCAGCTCCGAAGTACTTAAGTGAATCG
AGTTCAGCACGGCAGTCTGTTGTTTTTGATTCTCAGTATACACACATGGC
TAAGAGACTAGGGTCGCCGAGAAAAATGCAAGAAGCCCTAGCCTGCGTGG
TTCTCCTCGCGTTCGCGACCGCCGCCTTCGGGCAAGGCATCTGCGAACAC
CACAACGCCCTGGCTGCTTGCTTCATCGGTCCGGCGATCACAACTGCGGG
CTCGGTTTCGAGACCAGAGTCAGCGTCAGCAGCAAAGTCAGGGGTCCAAC
CCAGCAGTCGTCAGCAACAACAAGAGCAGCAGCAGCAGCGGCAACCCCGC
ACGCTTTCAACTGGCGTCGATGCCTCCTCTCCTCTTGCACTACGCATTCT
GTTGAGACGTGCCCTCGCGAAGCCGAAGCCCCGGGCTACCACTGGCAGCG
GGAGTGGGAGCGGGAGTAGGAGCGCGGCAGCGACGGATCCACCGCAAAGG
ACAGGAGCCGACGTGGACAACTTGTTCAGGTTTGTTCGCTGATGTCAATC
ATAAACGGGACTGCTGTGTGGTATGACACAAATACGACTACATGGTCACT
GACTACTGCTGCGGTGTGAGTTGGCAGTTTGTTTCCCAGCAGTTCCTGAT
GTACTTTATACATCTTTCACATCGAACGCCGTTTCGCTACTGCTGTATGT
ATGTAGAGTGTAACCCAATCTCTGCCGTTGTGAAAGATGAATTTGGCCGA
GGTCTGCACGTATTGGCGCGAATACACGTAAGCAGTGGCACTTGCCCATG
ACGGCCGTGCAAACTCCTTCGTATCATATCATATCAAATGTATGTAACAT
TACTGGTGTGCTTCGAAAATAGGCTCGGTTGGAACAGGTTCTAGTGCAGT
TATTTTCGACCAGCAGAGGGCGCACTGGAAAAGCCCAAAAACGGCTTGGC
GGTTTATGCGATGATGGGACGTCGTAGACCCAGGCTCTGGGACGACCGGT
ATGGTCGAGAGGGTCTCCGAGGATCAGTACAGGCAGCTAAATGAGTTCCC
ACTTATCGAGCAGAGCAAGTCATGGGCAGCGTTTAGCGGAAGGCCCATGG
CGTGAAAGACGAGGGGTTAGGAGGATAACACACGACTTTTCATCACACGA
TTCGTGCTCAGGTCGTATGATATCATGCAACAAACTTTTGGTTAACGACT
CAGCCATGTGTTTGGAGTGTGGGGCTTGAAGTCCGGTTAGCCACATAGGT
GAAGACACATACGTATTATGTCAGGGCTTTGTAGTACAGTAGAGGAGGGT
GGCTCACACCGACAGCGGGAGGTGATGCCACTGATTTGACCCGCACTACA
TGTGAAGAAGAACTGGTTCGAAAATATCGGCGTATTGTAAAAAACGGAGA
TCCTAATCGATGGAATCGATGCTGAGTGACGTCCGACATTTTATAAGAGC
GGGGATTAACGGAAGGCCAAAAAAAACGAAATAGCGGAAACAAAAACGAA
ATAACTTCGTTCTTCTGGAAAAAAAAATAAAAAACTCCATTTCGGTATTA
TCGCGTTTCTGCTGCGAGGAGCTGTAGCAGCGGAATAGAGGAGATAACGC
CAAAAATGATGTAAACCCAGAACGCGCGGGGCCCAATTTCAAATAACGCG
GTGGAATGCATCGTGTCAGCGTGTGGGTATCGTAGACGGCCGTGTGCTGT
CTGTTGCACTGACTGGCGGGTATGACGGCTCGGCGCTGTCTGCTGCGCTG
CTGAAGTGTGTGGATTGGGCCTCGCTCTGTTCGGGTTGGTGCCTGTTGCA
CCGCGGTGTATCGTAGTCGCAGTCTGTGTGAAGGAGTTCGCTGCCTGGGA
GGCTCACGGGCAAGCCTCCCAGGTTACCAAACTCCACGCATTTCGTTTTC
GTTTTCGCAAAAAAAAAGGTCCGAAACACTTTATTTTTGCGAAATCGAAA
ACGAAGGAACGCCTCCCTGGAGGACGTTGAAGCGAAAACACGCCTCTTTC
GTTTTTTTCCCGACCAATCAGAGCCCAATTTCGTTTTCGTTTTCGCTATT
TCGTTTTTTTTGGCCTTCCATTAATACGGGCTCTTAGAAGGCCAGGTCGA
GAGAAGCACAACACACTCTTCACTTCGAAAATTACACACCTCGTTTAGAC
ACAAAAACAGAGACAGAAGAGCGCTCTGTTTGAGACACCACCCACCCACC
TGACGGTGTTTAATAAAATGTACCAAGTAATATATTTGAACTAAGTTATT
TCTTCACGAAATTACGCCATGAATGTGGCAAGAAACGAGTATCCCGACAG
GAACAACGGTTTCAGCATACTCATTCCTATACCCTACAGTATTCACGACG
GGTGGCAACACCGACCTCTACGGGAGGTGATGCCACTAATTTGACCCCGC
CGTAAAGTTGTGTTCTGGCTCAACATGTCCTTCATGGAACAGCGTTGTAC
ACCATCACCCTGCCGGTTATGATTTTTAGGTAGTGTCCGGACACACGCTG
ACCCTCCCTCCACAGCCAGCAGAATCCATACAAGTCACTTTCAAAGATCG
CTCCGACGAAAAAAAAGGCGCACTGCTGCTGGAGGCAAAGCTCACGTACC
TCGAGGCGATTTGTTGATCAAATATTAGCGTGTTTGCGAAAATCACAAAA
TTTTGTAGAGTGACGCCAGTGCAAATAAAATCAGATTCCGCCCTCCTTCG
GTACGCAGAAAAAACTCGGATGGAAGATGTGTCTTGCGAAATTTGCAAAA
TTGGAAACCATAATTGACCAACCAGGGAGGGCCCTTCCGGCGGGAGATGA
TAACGACGTACACGTGTGTGTCACTTTATTCGACATACAGGATGATATGG
TTGTGGAAGAGCTGAACTAACAAATGTACACCTGTCAGAGGATCTTTCGA
TCTGAAAGAAAGTTCTGAACTTCAGTTCAGCACACAAACCATGGCATACA
CACGTACCCGCCCCACCCCAACCCAACCCAACCCAACCCAACCCTAACCC
TAACCCTAACCCTAACCCTAACCCTCACGACCGACCGAGGAGGGTCGTAG
CGAGCACAACCGCAGCTGCGCCGCGGTCGTGGAACGCCGGTGGTCCGCAG
GACAGAACGCGGTGTTCTTTACGTACACATGAGGTTGACCAATCAGAGGA
CCCGGGGAGGGTGACATATCATCCCAGTATGTCGAATAAATGACACACAC
GTGTACGTTCTTATCACTTTCCCCCTTCCGGCACGTCTGCGTCGTGTTGC
GGTCGTGTCTCTAGATGCGTATGATATGATATGAACCTTTGAATCTGATA
CAAGTATGTACAACGCAAACAACACGTATATACAACAGAACATGCATGCA
TGCGTGCATGCCCGGTCGGGTTGTATCGCCGTGGTAATCTACAACAGTCA
GGTAGCAATGACAGCGAGAGGAGTGCGGTAGATGAAAGAATCGGAAACGT
TTCAGCCAGAGCCCATGCCGTGAAAGCATCGAGTTTTCTTCCGTCAGTCT
CTCTGCTCTCCTCACGGGTGCATCGCACACATACATACATGCAGGGACGT
GCTCCGTTCTGTTTTCTGTACCCTCAGCCCTCTCTACCTCTTCTTTTCTG
GAATTGCCATTTGAGGAATGAACATGTTCGCGAGCCGTATGTTTTTGCAC
GGTATGATGGATGCATAAACATGCCCGCGCAACCAGCCTCCCTGCCCAGC
CCTGCTTCCAAGAGGTCCCTTTCCTCGATATGGTAGTAATCAGCATCCAC
AACCAAGCTGGGAGCCACAGCTTTATCGGGCCTTTTCTATCGCTGACGTC
GCGCGACTTTGTCATGAGCGCCAATTAAAGCTTGTGATGCGAAGAGCGCC
AACCACAGCTCGTGGTCGTTACAATTACAAAATTTTCTTTGAAATCGAGC
AAATCCGGCCGGATTTGCTCAGATTCGAGCAAAATTTCGTCGGAATCATT
TTCCGGAGAAACATTTGGGGCTCCAAACTGGTCGTTAGCCATGAGAATTT
TGTATTCGTAAACACGTTATTATTAATTCTTTAATTGTTTTTGTTATGTT
TGTCCGGACAGAAACAAAAATCCCCGAACCCCATTACGTTGGGAGCTGAG
CAGCATTCCGGCTGCACTCGGATGCGGGCAAGAGGGCAAACAAACACCGC
TCATTGCTGCTGCTGTGTGTAGTCAAGGGGTGTGAGGATGCTCAAGACTC
AACATATTAATAAATCCCCGGCAGTCGAAATCTGAATCACCTCGTCCGAC
ACACAAGCATCGTCATCAGTCGAGTGTGTAGCACCATCGGCAGAAGTGTG
CACTTCGCAGTATCATTTTATTCTGGAGTGCAACACCACACCAGCATTAT
AGCAGCACTACTCGTACTACAACTGCTACTGCCGCTGCTGTACAGCAGTA
CATCACATGTGCCATACAGTATACCTCCTCCCTTGTCGGTATCATACGTA
CAACAAGCAAGAACAGTAGTAGTATATCTACGTACCTCTATGTTAATACA
TCCTGTAGAGATCATGGTATCTTATTATCTTGTTTGGTCAATCCAGCGAC
AACAACAGCAGCAGATACATGCGATTGGTCGCTAGAATACTACCACTGCG
CTGCCGCTGCTGCTGCTACCTATGAGCCAGAAGGAAGGACCGGCCTTCAG
GCCGGCCGCAGGCCACGGGGCCCCCACCCAAAAGTACGTTTAGCAGGCCG
GGAGCTACAGCGGGAAACGAGTACTGTATTAGCACTCATATTTTTCCTTA
TTATCTTGTTTTGAGTGGACTGGATACTTTAAGCGTTATTATTGGTTAGA
ACACGTTTCATGACGCCCGAGACCTAGCCGCGGCATCTTGACCACCGGGT
ATTCCTTCTGTACTCTCCCGGGACGTTACCAGCCCGCTGTGAGCCCCCGT
CAGGGGCCCTGGCTGTAAGTATTTATGGTGCGGTTGTGTACATTTTCTCT
TGGTCTCGTGACTGCTGTACATTTGACAGGGACATTTGAGCCATACTTTT
TTTGCTCGGGGGAACATCGTATGGTTCTGATTTGGAACCCGGGCTGTTTG
TATGAACAGGAACAAAACACCCTGGTCCCAGAAGGGTTAATAACACTTAT
AGGAGGTAGCATATGGCAGCGTGTGTTCGTTTTTTTTTTTTTCAAGTTTT
TTTTTTTGTGTCTTAACTTTTTTTACTCTCGTGAGGCTCTGGAGTTAAAC
CTCCAAGGGGTGTCTTCGCTTTTCAGCTGGCCCCCCAACCCGCACTACAT
CCACGGCGAGCAGCTGCCCTCTGCTCGCGGTGGATGGACTGTTTACAAAG
TGGGTGTCGGTACACACTGCGGTGGCGCGCGTCTTGGTCGACTCTTATGG
AAAAAATGCTTTGACTTTGCTTGTATCCGAAACGCCTCGGCAACCAATTT
TTTTTGTTCATCTGTCTCTACTCCAGCTGCTCTACTCCAGCTTTTCTACT
CCAAACAAGGATGATAGTGGATAGATTGCGTATGATACCTGTTTCCTACC
AACCTTCGAATAAAGTATAGAAAAAAGAAATTGGTGGGAGGGAGTCTATC
GGGGGATTTCGGTCGGCTCATCTCCGCCCTTGACGGTAGACGGAAGCCAC
CCTCTGCTTTCCGTAACAACCTCGGGTCTGGGCGATCTTCCACAACGCCT
CGAGAACCGAAACAGAAACATCTCACAACCATTTCACAGCCTCGGGTTTG
GGCGATCTTCCATATCGCCTCGAGAACCGAAGTAGAAACATCTCACAAAC
ATTTGATCGGAAGGAGTCCTGTCGGGGGCTTTCGGTCACCTCATTCCCGT
CCTTGACACCGTCCTTGACGGAAATCACCCTCTGCTTGCCGCGGTCGTCT
TTTGCCGTGGGTGTACCGGTAGGTCGTGCTTTCTCAGTGGCTCTGCCAAA
GACCTCGGTTTCGGGCTCTTCCCCAAAACCTCACAAGAACGGCAAGAACA
ACATGTGATAAATAGAAGATTCGTCGAACGGGGCACACGCGATCATGTGC
CACTTTTTCTCGAATCGAGCTTTTACAATGGGCCCAGAGGGAAACTTTAC
AGGCGTTCTTTTTTTTTTTTTTTGAGTATGAAACCAGTGCCGAAATGTTA
GATTTTGTGTCGCGGAGCAGTACTACGTGTTCCCTCTTTCCTAGCGGAGG
AGAGTCTGTGTGTGGCATTGGCGAGGAAGAACGGGGTGTGCGTGTGAGGA
TGTGAGGGACAGAAAAACCCTGTATATTTGTACATAAAAGGCATGACCTT
CGCATGCTGTGGTACAGGGGCTGGAGAAGTACTTTGACGTACAACCTTGT
GCAGCGGCGCACAATAATAAAAAACGAGGCGGCGAAAATTAACGGTGCCA
TCCGTTTTTGAAACACGAAGTACCAGGGATACGCTTCGGAAGGGGCCGGT
TTTTTTAACGGTCGGGTGTTGTTACAGAGTTTCTTCCTCACACGAAAGAT
TTCACGAGGAAGTGGAGTAGAGTTCCGAAACATGCCATCCAGTGTACCAG
AATATACCGTCCAGTGTAGCACGGAGGTGGCGCGGGATGGAACATGGGAC
AAACACTAGCTCCCACGGTAGGCCGAACGACGTACCACCCCCCCCCTCCC
CTCCCCTCGCCCCCCTATCCGATCCCCGGAACCCCACCCTCGTATTGAAA
AAAGTACCTACATAAATTACGGGGCTCAATCGCTTCCAGCGGTGCGGCGC
GGCGATTCAAACACAAGCCCGCCTTGCGGAGGCGTGTTCCCGAAGACGTT
CCCTTTTACATAATCACTGTGTACATGAACAGTAAGGTGTGATTTTCTGA
TCGCACGAGGCAAGAGGGATGTGACCGAACCCTGCCTTCTCGTGACAATG
GTTACAGTACGGCAGGCACCGCACAAGGAAGATCCAGAAAAGTGGAGAAA
AAATTCAGTGTGTGTTGGACTTTCCTCCCGCGTACGGCAACCCGGGCCGA
TGGTTCGCCCAACCTGCACCGAAAGGTGCACACTGGCGTTGACAAATTTT
TTGATGACAACACGGACACAGACACACCTCTTATCGGAATTATTCCACAA
AGAGTGAGTCAATACTGCTGGAACCAACCGAGTAGGCTCGGATAATTTCC
TCAGCGGTATCAGATTTTTTTTGTAGGTGGTCATCGTTCTAGGGGTGTGC
GCGTGCCAAAAGCAAAGAATAGAATCTGAACACAAAATACATTTATCCCA
CTGCATTTCGCGCGCATCACGATGATATTACCCTTGACACGCCCAGGGTA
AAGAACGCGCCACGGCCGTAAGCAGATTAGTCTCGATAATACATACCTTG
ACTCATGGAGCGGAGAGCGATATATTCCTTCTGTGTAACCCCGGCTGGTG
CACCCACTTCATACCGAAAGGTGTAGACTGTTGCCCGTAATAAACCGGAC
GAACACACACATTATGGTAAAGGTTTGTCTTGGTTTCTGTGTTTCCAATT
TTAGTTTTTTTCTTTCGAACCTGTATTTTTCTGTGTTTTCCTTGTACTTC
GGCCACCACAGATGGTACCCCACCGGTACCGTATCTGATTTGACTGTGGG
TGATCACCGTCCATATATTTTATTTTTATTTATTTTCCTCCTAGCACGAT
ATGTGCCTGGTTTGTGATCACGGGCTAGACTGCGGTGGTAGTGAGCTAAT
GTGAGAATAATCAACAACACAACACATGTTTGCCAGAGCCTTTTTTTGTC
AGCCTATGCTCGCTTGGGTTAGACTTATCACGAGAGGGGACGCATAGACC
TGTGTCTCCCCTCCCTCCCGCGACGACCGCAAGCGACGCACCACGCGTTG
GCAGGACAAGTAAGCATTGATTGCAATACCCGCCTCTTACCTGAAAGCTT
GCTGCTCTGCAGCCAGAGCGTTTCAAGCTTCGTCAGGGCTCCAAGCTCCT
CAGGTATTGGCCCTGCACCAGCATAAAAAAAAAAAAGGTTAAAAAAAAAA
AAAAAGCGGCAAACATAACAAATGATGTCGCCTGATTGTTTTAGAACAGC
TGCTCGCCCACGCGCACCTTGGTTGGTTGGCCATCAGCTACTTCCTCTTT
CGACCTCGTGAAACCAAACTCAGCTCTCAACATCTTTCGTCCTGGCGCTT
ATTACACCGGATTGGGTGGAGACAAAAACAAAATTCGTCAAAAATTTCAA
AATTCCGAAAAATCCTCACCAGCATTTCGGAGCCGAACTTTCGTATCTCA
ATTATCTCGTACCGCCGCTGATGGTCACGAAATCTCTGTGTTTTTACCTA
GTATTTTTTTCCTGTTTTTTTTTTCGCCTCCCGGTGAGATTGATCTGCAG
CTGGCTGTGTCAATAGGCGTCGTGGACCAAATCAACCTGTGCGCCGTGGT
AGCTGATCGTATGGAGGTCGCAAAGTTACCGAGTCAAGCAAGACCTTGAT
CGCTGGTTAGTGGTGGGAGCGTGTCATACATGCAAAAATTGAGGAGCGAG
TCGCTCTTGCAATGAGAGTCACGTGCGCATGTTCCCAACCGACAGCAGCT
GTTACCGGAGAGATTCAAGAGATGGAGGTCAGATAAACCACACACCATCA
CAGTCACCATTTCGTTCCCTACACCACACCTCTCAAAGCGAACTCTTGCT
GGATATCACTTCCATTCATCTCTCTCCATCGATAGGGCGTTGGACTGGAG
GCGGGGTCATTCAATCGACAGAAATCAGCATTGTTTTGTACTCTTAAGTA
TCAGATCTGACCGCTGCTGCAGTTATGCCGAACCGTTTTTCAGGCGGCCG
AACAAGTGCTCTTTACCCAAGTATAAAAAAGGCCAGATTTGTCTGCCTGA
ATGCCGTAAGTTCAAGCAACGAGCGATGCTTCTCTCTGAGGATTGAAAGA
GTCCACCTCCGACCCAACGCCCCACCAACCAAGAACAGTCACCGAGGGTT
AGAGCCAGGAAGGGTTCACGGCTAATGGTGGGGTAGGGAATGAGAACCCG
ACTGCTGTGTGTTGTGCAGCTTTGTCGTTTCTGGACTGCCGCGTGGAGAT
CTCGGGGGTTTGAAACAACGAACGCCCGCACGTGCCACGTGACCTGTACG
AAGAGCCGCTTCTCGAACGTTTTTTTTTTCTTTGCACGCCTGGCGGCTAC
TCTAGGGGTGCTCCGAAGCGGCTACGTCGTGCGTATACGCTTGTGCGGCC
GTGGGTGTTGCTTGTGGCGCGTGTCGGCCTCAAAGACATGGGTGCCGTGG
TAAGAGTCGTGTGTTTGTGTGCGTCGGGTATCGGAGCAAACACGCGGCCC
GACCTTTTTTCCCCGCGTCGCAAGGGTTTTCAATACGGCAAGGCTTGTGA
AATGATCCCCAAAGATTTGAAAAAAAGGGCCGGAATCGTCGGTTTGAGAA
AATCTTCCGCCGCATTTTTCGAAGCATTTTGTTCGAAACAGAGAATGATA
TCACGGTGTTAAAAATCCTGACAAATTTAGGCATTTTGGCGTATTTTTCA
CCCCGATGAAATCCTGTGTTGCATCCTCGATACCTCTCGTGTCCGCCATG
TGGTGCCAGGTTGGAGGTCGCCCAGCGCATGAGGGAGATGAAGCTCATGA
CGCAGTCGGGGGTCGGGCCGCTCGCTCCCGTTGCGGGTGCCGCCGCCGCT
GCCGCCGCCGCCGCCACGCTGGCGGAGACGCTGCCTACGAACAAGCTTGA
GGGGGACGCGGTTGCTCTGGAGCACCAGATTTCCCTGCTTTCCATGAGGA
TCACGAGCATCGCGGACCACTTGAAGGTGTGTCTCGAGTATGTGTACAAG
TATGGATGGACGTATGCCTGCTATGCAGGTTGTTGTTGTTGATTCTCACA
TTAGCTCACTACCGCCGCAGTCTAGCCCGTGGTCACAAACCAGGCACATA
TCGTGCTAGGAGGAAAAAAATAAAAATAAAATATATGGACTATGATCACC
CACAGTCAAATCAGATATGGTACCGTTGGGGTACCATCTGTGGTGGCCAG
AGTACCAAACAAAATACAGAAAAAAAATAACGGGCTCGAAAGAAAAACAA
AAATTGGAAACAGTCCGACAAACGAAAAAATAATCAAGACAAACCTAAAC
CATAACCATATACTCCGTACTTCGAAGTGCTTCGTACATCGAACCAGGGC
CCAGGGCCATGACAGACCAAGGCAAAGGCAAACCAGGGCGATGGTCCAGT
AACTATAAGATCAATAGACGAAAGACAAAAAAATAGAAAAGAAGAAGATA
CAGGGAGGGCACAAAGACTGAGGGAGTGCACTCGTACACAAACACAACAA
ACAGGCCGCCAAACAAAGAGGAAGCAGGGGAACGAAAAGGGAAACGAAAA
ACAGAGGCAAAGAGGAATGAAATACATGCATGGAGAGTGCAGAGGGAAGA
CCGGAAGTACCGGAAGTCGGGGGGGGGGGGCGGAGGTGAAAAAAACAAAA
TAAAAGGCATGCAATCAATCGCAAACATGTCTTGCAGGTATACATGCGTG
TAAGATGTGTCTGCACGCATGTACAGCTGGGTGCATGTAAATGCTGTAAA
GGAGTATCGCGTTCTTCTGTGAGGTGAAAAGGCATCGACCGGTTTTCGAT
TTTCAGAGCTCGATACCCACACCTCCGGTGGTAGAACAGAAATGGATCAT
ACCATGATTGCGAGGGTTTTAGAACAACAGCTTTTTTACTGTCTGTTCCT
TGGCGTTTCAGATAGCGTTGGATATTTTGCTGAGGAGTACTTTTAGATCT
GTGTGATGAAGATCAGGCAACCTTATAAAAAGGACCCGACTCGTACGCTC
AAGTGCGGGGAAAATCGCAACCGAGAGCGTCGGCCACCCACCCCCACCAC
CACAACAACGGGACGCTGAACCCCCCCCCCTGCAACATGAACTGTCTCCG
TCATCTCATTCCAGACCACTCCGAACGACGCCATTTCGAGAAAAGGGCTG
GTGGTCCTCGTCAAGCGACGGCGGCAGCTCTTGCAGACACTTCGGCACCG
CGACAAAGGCCGCTGGCTGACCACCACGGAGAGCCTCGGCCTGAGACAAC
GCGCGGGGGCCCCGCCGGTTGTTGCGGGGGGGGCAGGCGAGGGGGAGTGG
CGGCGAGAGGAGGAAGGAAGGGCGGCGAGGAGAGAAAGACGGAGGGACAG
GGGGCGCCGCCGCCGCCGTGAAGAGGAGGAGGGGGGGGAGGGGCGGCGAT
AACAACGGAACCAGAGACGCCTTGAGGTGGTGATTGACGGGACACTGGTT
GACTTGATTCCAACTGCTGCCTGCCGATGAAGATCAAGATCAACTGCTGG
CTGACTGGTGGCTGGATTATTGCTGATTTGCGTTGTGTATATATGTTGTT
GTCGTCACATCGTGAAAGCCGCCTCGACGCAGTACACTTTTATTTTAAGT
GCTGGTTAGATTATACATGAGCTCCGTAGGCTTCGATGATGGTGATGGCA
CCTGTCGTCGTTTGCACAATGTACACGACCGAACACCCAGTAAGGACCGC
TCTATGATACGGTATTAAAAAGTTATGAAGAAAGAAAACACACCTGGCAT
GGTTGTTCGAAACAAGACTACCAACGCTAGGAGACGCAGCCTCAGCCATG
ATGGTGACGGTGACGTTGACGATTGTTGCTGCGCATTATCTTGGATGCCA
CGAATCATACGATGACGATGGCAGTGACAGAGGTTTGAACGAATTATGCC
GGTCGCCGTTGGTGGTTGACTGTTGAGAGTCAATTTAGGCACAGGCGAAC
AGCAGCGCGTCGGTTGTGTAACTCTTTTCGGGTGTCGCACAACCGATAGA
GTGTTGATGCCGCGAGTGATGCAATTGTGGGCGGGCGGGCTGCGGGGATG
GTGTACTGATTGTTGGTTGGGGCGTTGTACGGGTAAAATGACGGTGGCTC
CTTTTGTTTCGGGGCAGGTCGATGGTGACAAGTGACGAAAGGACTATTCC
TGATTGTTCCACTCATTTTTAATGCGGATGGGTTGCAGTGACGAACCCTT
GGTTTTTCCATTCCCTGATGGTGTATTCGATTCCATGGCACGCAGGAATT
TCTTGATTGCGGGTTGGGCACGTGCTAGCGGGGGGGGCGGAGGAGATTGG
GCGATAGCTCTGGACATTCCCTCTGGCACCACGCCAACACGCCCTTGAGT
ATTCGCATTACGTCATATTTTTTCGCTTGTTTTCCTAGGTGCTCTTCTTC
GGTGCTCCGTGTTTTACTTAGCTGCGGGGGAGAGGGGAGGGGAACATTGA
CCCGAGAAAGATGACGATCAACCCCGGAGAGGGGCACCGTGATGTGATGT
ACACCAGCACTATTCTAGTACGCTGAGGCATTGAAGGAGCAGTATGTCGG
CCCCGCTGCAATAACCGCCACGGGTTTGTATTATTGGTAAATATTTTATT
TACCGCAGGGAGTCGTTGATGTGCAATCGGTGGTGATACGATATGATTAT
CACAAGATCAATTTCACCTTTCGCGGGTACACTGCTTCTGTCTGGGAAAC
ATTGTGCTGCTTGGGTGTGAGGTTTCCTGAGGAGACGTGCGCGTCGTGAC
AGGGTACGTAGATGTGAACTACGCTAAGTTCAAGGATATTATATCCCCCT
GTTCAGCCGGAGTTTTCTTCGAAAACAGTAAAGCGGTTAGCGGGCTGTAT
AAACGAGGTTCCGTTGTGACCGCCTCTGCCGTGATAAATATGACTACGGA
AACCGTAAGCAAGCATTGCCTTACACACTTGAGACTGATTGCATTGCCTT
TTCCTTGACTTGAATCACCTGCTCCTTTTTTTTGCCACCTCGAAGATCAC
AAATTACACTTGGGAGTAGTTTACGGCGTCTAGAAAATGATGGAACAGCG
TGTAACGATCAGATGACCGGTACCGATGCATGCATCAAGAAGACACTGCT
TGCC
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Coding sequence (CDS) from alignment at P-littoralis_Contig102:49562..62615-

>mRNA_P-littoralis_Contig102.13.1 ID=mRNA_P-littoralis_Contig102.13.1|Name=mRNA_P-littoralis_Contig102.13.1|organism=Pylaiella littoralis U1_48|type=CDS|length=939bp|location=Sequence derived from alignment at P-littoralis_Contig102:49562..62615- (Pylaiella littoralis U1_48)
ATGGCTAAGAGACTAGGGTCGCCGAGAAAAATGCAAGAAGCCCTAGCCTG
CGTGGTTCTCCTCGCGTTCGCGACCGCCGCCTTCGGGCAAGGCATCTGCG
AACACCACAACGCCCTGGCTGCTTGCTTCATCGGTCCGGCGATCACAACT
GCGGGCTCGGTTTCGAGACCAGAGTCAGCGTCAGCAGCAAAGTCAGGGGT
CCAACCCAGCAGTCGTCAGCAACAACAAGAGCAGCAGCAGCAGCGGCAAC
CCCGCACGCTTTCAACTGGCGTCGATGCCTCCTCTCCTCTTGCACTACGC
ATTCTGTTGAGACGTGCCCTCGCGAAGCCGAAGCCCCGGGCTACCACTGG
CAGCGGGAGTGGGAGCGGGAGTAGGAGCGCGGCAGCGACGGATCCACCGC
AAAGGACAGGAGCCGACGTGGACAACTTGTTCAGGTTGGAGGTCGCCCAG
CGCATGAGGGAGATGAAGCTCATGACGCAGTCGGGGGTCGGGCCGCTCGC
TCCCGTTGCGGGTGCCGCCGCCGCTGCCGCCGCCGCCGCCACGCTGGCGG
AGACGCTGCCTACGAACAAGCTTGAGGGGGACGCGGTTGCTCTGGAGCAC
CAGATTTCCCTGCTTTCCATGAGGATCACGAGCATCGCGGACCACTTGAA
GACCACTCCGAACGACGCCATTTCGAGAAAAGGGCTGGTGGTCCTCGTCA
AGCGACGGCGGCAGCTCTTGCAGACACTTCGGCACCGCGACAAAGGCCGC
TGGCTGACCACCACGGAGAGCCTCGGCCTGAGACAACGCGCGGGGGCCCC
GCCGGTTGTTGCGGGGGGGGCAGGCGAGGGGGAGTGGCGGCGAGAGGAGG
AAGGAAGGGCGGCGAGGAGAGAAAGACGGAGGGACAGGGGGCGCCGCCGC
CGCCGTGAAGAGGAGGAGGGGGGGGAGGGGCGGCGATAA
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