prot_P-littoralis_Contig1017.23.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1017.23.1
Unique Nameprot_P-littoralis_Contig1017.23.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length240
Homology
BLAST of mRNA_P-littoralis_Contig1017.23.1 vs. uniprot
Match: A0A6H5KJK8_9PHAE (WW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJK8_9PHAE)

HSP 1 Score: 242 bits (617), Expect = 3.700e-76
Identity = 139/235 (59.15%), Postives = 167/235 (71.06%), Query Frame = 0
Query:    1 RPVARAPAVPADPPPVYGSNTA-----AALKSRQLGSCCTPRITFWISCALGWVVWAFAVGAAADNSW--LVAVDLAAGDEEVLDSCSSSDSTFCNNYKAFTAMQFVAVVLVSVAMALLMVAPFRPAKA-GCGSVHALGLAGGILMAAFSFFQMLAFVLMIVIEKELD---NVGDSFNGYDAKLGSTFGVAVVATLLGMFQAGSVLAFVRSSGDGPFFKCFHDCMAMNTDPNAAV 224
            RPVA  P    D PP YG N A     AA ++ + G CCTPR+TFWISCALGWV+W FAV A+AD+ W  +   D+ AGDE++LD C SSD   C+ YKAFTAMQF+A V+VSV+M L  +A FRPA    C SV +L +A G LM AF+FF+MLAFVL+IVIEKELD   N G  F   +A LG+TFG+AVVA +LG+ QA SVL F RSSGDGPFFKC ++CMAMN  PNAA 
Sbjct:   34 RPVASVPQRGPDLPPPYGGNAAHCAAVAAPQAARSGPCCTPRLTFWISCALGWVIWVFAVAASADDKWAKIDGFDIGAGDEDILDDCDSSDDV-CSLYKAFTAMQFIAAVVVSVSMVLFTLALFRPAAGLKCCSVKSLAIAAGSLMMAFAFFEMLAFVLIIVIEKELDGEFNTGFGFG--EADLGATFGLAVVAVVLGVVQAVSVLTFARSSGDGPFFKCLNECMAMNNAPNAAA 265          
BLAST of mRNA_P-littoralis_Contig1017.23.1 vs. uniprot
Match: A0A6H5L0F7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0F7_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 3.820e-24
Identity = 64/162 (39.51%), Postives = 90/162 (55.56%), Query Frame = 0
Query:   34 CTPRITFWISCALGWVVWAFAVGAAADNSWLVAVD----LAAGDEEVLDSCSSSDS----------------TFCNNYKAFTAMQFVAVVLVSVAMALLMVAPFRPAKAGCGSVHALGLAGGILMAAFSFFQMLAFVLMIVIEKELDNVGDS-----FNGYD 170
            CTPR+TFW+  A  W+VW FAV AAAD+ W+        LAAG++ VL+ C   D                 + C+ Y+AFTAMQ +A ++ SV++ LL +A FRP    C S   L   GG LMA ++ FQ++A VL  V+ +E DN+ +       +GYD
Sbjct:   18 CTPRLTFWVIAASSWLVWIFAVSAAADDKWIKDNGQGDWLAAGEDPVLNLCDGLDDAADDDLLATDEYKDFVSICDLYRAFTAMQMLATIVCSVSVLLLALAFFRPEAGKCASTRTLAFVGGALMATYALFQLVAVVLAAVLAQEFDNLPNDDDTSYLSGYD 179          
BLAST of mRNA_P-littoralis_Contig1017.23.1 vs. uniprot
Match: A0A6H5JD07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD07_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 1.140e-8
Identity = 42/100 (42.00%), Postives = 60/100 (60.00%), Query Frame = 0
Query:   51 WAFAVGAAADNSWLV-AVDLAAGDEEVLDSCSSSDSTFCNNYKAFTAMQFVAVVLVSVAMALLMVAPFRPAKAGCGSVHALGLAGGILMAAFSFFQMLAF 149
            W FAV AAAD++W+  A +   G+     SC   D  FC  YKA TA Q++A ++VSV + +++VA F PA         LGLA GI++  F+ F++LAF
Sbjct:   21 WIFAVAAAADDAWIADAYEAGLGE-----SCDGYD--FCGLYKAATAFQYLATIVVSVVLVMVVVAAFTPAPV----TGKLGLAVGIMLFVFAVFELLAF 109          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1017.23.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KJK8_9PHAE3.700e-7659.15WW domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A6H5L0F7_9PHAE3.820e-2439.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JD07_9PHAE1.140e-842.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1017contigP-littoralis_Contig1017:79682..86055 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1017.23.1mRNA_P-littoralis_Contig1017.23.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1017 79682..86056 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1017.23.1 ID=prot_P-littoralis_Contig1017.23.1|Name=mRNA_P-littoralis_Contig1017.23.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=240bp
RPVARAPAVPADPPPVYGSNTAAALKSRQLGSCCTPRITFWISCALGWVV
WAFAVGAAADNSWLVAVDLAAGDEEVLDSCSSSDSTFCNNYKAFTAMQFV
AVVLVSVAMALLMVAPFRPAKAGCGSVHALGLAGGILMAAFSFFQMLAFV
LMIVIEKELDNVGDSFNGYDAKLGSTFGVAVVATLLGMFQAGSVLAFVRS
SGDGPFFKCFHDCMAMNTDPNAAVRGGYGGGGGTHQQQQQ
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