prot_P-littoralis_Contig1015.13.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1015.13.1
Unique Nameprot_P-littoralis_Contig1015.13.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length324
Homology
BLAST of mRNA_P-littoralis_Contig1015.13.1 vs. uniprot
Match: A0A6H5KNQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ7_9PHAE)

HSP 1 Score: 277 bits (709), Expect = 2.550e-85
Identity = 238/291 (81.79%), Postives = 243/291 (83.51%), Query Frame = 0
Query:    1 MSVVATWNCEAFVNSLHVYSDGSKVVSADASGKILTWDTRTGGIVDSYSLEDPIHISHIQASPPDAGRQDEEGLLLAANCFDNTLRVFHRRFLNNSRPRRSRHAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAASSSPGVGMGEVGEDREPSLELMHALRGHTVKNWPIRCAFFRGLHHRPPRVRLGVAKGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGRYCGGMGNNDLGNDWQHSLVLATGSTDGSIHVFDLSNGQ 291
            M VVA WNC AFVNSLHVYSDGSKVVSADASGKILTWDTRTGG+VDSYSLEDPIHISHIQASPPDAGRQDEEGLLLAANCFDNTLRVFHRRFLN SRP       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+   + P          +EPSLELMHALRGHTVKNWPIR     GLHHRPPRVRLG+AKGG   XXXXXXXXXXXXXXXXXXXXXXXXXXXX           MG  DLGNDWQHSLVLATGS DGSIHVFDLS GQ
Sbjct:  292 MGVVAKWNCGAFVNSLHVYSDGSKVVSADASGKILTWDTRTGGVVDSYSLEDPIHISHIQASPPDAGRQDEEGLLLAANCFDNTLRVFHRRFLN-SRPXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGEAKP----------KEPSLELMHALRGHTVKNWPIR-----GLHHRPPRVRLGLAKGGNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------MGYKDLGNDWQHSLVLATGSADGSIHVFDLSKGQ 553          
BLAST of mRNA_P-littoralis_Contig1015.13.1 vs. uniprot
Match: A0A5D6XXH4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXH4_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 9.890e-15
Identity = 47/93 (50.54%), Postives = 59/93 (63.44%), Query Frame = 0
Query:    3 VVATWNCEAFVNSLHVYSDGSKVVSADASGKILTWDTRTGGIVDSYS-LEDPIH--ISHIQASPPDAGRQ-DEEGLLLAANCFDNTLRVFHRR 91
            VV +W  +A VNSL+V  DG  +V+ D+ G + TWD R    +D  S L DP    ISHI ASPP  GR+ DE+G  LAAN +DN LRV+ RR
Sbjct:  213 VVRSWQNDAMVNSLYVSPDGQFIVTGDSKGMLKTWDVRMDACIDDISKLNDPGRHAISHIHASPPVDGRRGDEDGRFLAANSYDNLLRVYDRR 305          
BLAST of mRNA_P-littoralis_Contig1015.13.1 vs. uniprot
Match: A0A8K1CHV1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHV1_PYTOL)

HSP 1 Score: 81.6 bits (200), Expect = 1.570e-13
Identity = 47/90 (52.22%), Postives = 56/90 (62.22%), Query Frame = 0
Query:    6 TWNCEAFVNSLHVYSDGSKVVSADASGKILTWDTRTGGIVDSYSLE-DPIH--ISHIQASPPDAGRQ-DEEGLLLAANCFDNTLRVFHRR 91
            TW  +A VNSL+V  DG  VV+ D+ G I TWD R    ++  S E DP    ISHI ASPP  GR  DE+G  LAAN +DN LRV+ RR
Sbjct:  241 TWQNDAMVNSLYVSPDGQFVVTGDSKGMIKTWDVRMESCIEDISRENDPGRHAISHIHASPPVDGRGGDEDGRFLAANSYDNILRVYDRR 330          
BLAST of mRNA_P-littoralis_Contig1015.13.1 vs. uniprot
Match: A0A2D4BDQ6_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BDQ6_PYTIN)

HSP 1 Score: 78.6 bits (192), Expect = 1.650e-12
Identity = 45/93 (48.39%), Postives = 56/93 (60.22%), Query Frame = 0
Query:    3 VVATWNCEAFVNSLHVYSDGSKVVSADASGKILTWDTRTGGIVDSYSLE-DPIH--ISHIQASPPDAGRQ-DEEGLLLAANCFDNTLRVFHRR 91
            V   W   A VNSL+V  DG  V++ D+ G I TWD R    ++  S + DP +  ISHI ASPP  GR  DE+G  LAAN +DN LRV+ RR
Sbjct:  228 VCRKWQNNAMVNSLYVSPDGQFVITGDSRGMIKTWDVRMESCIEDISRQNDPGNHAISHIHASPPVDGRSGDEDGRFLAANSYDNILRVYDRR 320          
BLAST of mRNA_P-littoralis_Contig1015.13.1 vs. uniprot
Match: D8LEF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF6_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 1.780e-10
Identity = 30/34 (88.24%), Postives = 30/34 (88.24%), Query Frame = 0
Query:  258 MGNNDLGNDWQHSLVLATGSTDGSIHVFDLSNGQ 291
            MG  DLGNDWQHSLVLATGS DGSIHVFDLS GQ
Sbjct:    1 MGYKDLGNDWQHSLVLATGSADGSIHVFDLSKGQ 34          
BLAST of mRNA_P-littoralis_Contig1015.13.1 vs. uniprot
Match: A0A835Z281_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z281_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 3.750e-7
Identity = 34/97 (35.05%), Postives = 41/97 (42.27%), Query Frame = 0
Query:  195 AFFRGLHHRPPRVRLGVAKGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGRYCGGMGNNDLGNDWQHSLVLATGSTDGSIHVFDLSNGQ 291
            AFF+GL HR PR+R   A                                           GG+G  D G DW HSLVLATGS DG+I+ FD+S G+
Sbjct:    2 AFFKGLQHRTPRMRRAAAGNSAGGSAHGRRAAAESVG------------------------GGIGYEDSGKDWAHSLVLATGSADGNIYTFDMSKGE 74          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1015.13.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KNQ7_9PHAE2.550e-8581.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5D6XXH4_9STRA9.890e-1550.54Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A8K1CHV1_PYTOL1.570e-1352.22Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BDQ6_PYTIN1.650e-1248.39Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
D8LEF6_ECTSI1.780e-1088.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z281_9STRA3.750e-735.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 2..38
e-value: 17.0
score: 9.2
coord: 175..286
e-value: 0.84
score: 17.5
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..315
e-value: 9.4E-12
score: 46.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..244
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..177
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 3..297

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1015contigP-littoralis_Contig1015:48157..50614 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1015.13.1mRNA_P-littoralis_Contig1015.13.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1015 48014..50693 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1015.13.1 ID=prot_P-littoralis_Contig1015.13.1|Name=mRNA_P-littoralis_Contig1015.13.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=324bp
MSVVATWNCEAFVNSLHVYSDGSKVVSADASGKILTWDTRTGGIVDSYSL
EDPIHISHIQASPPDAGRQDEEGLLLAANCFDNTLRVFHRRFLNNSRPRR
SRHAGGGGGSGGGGSSGSGGGSHKTAGGGAGAGAAANAASSGTSSTSSQS
SDAGKAASSSPGVGMGEVGEDREPSLELMHALRGHTVKNWPIRCAFFRGL
HHRPPRVRLGVAKGGGGGGGGGGAGRGGNGRGQQGGGGGSGSGAGGGGGK
GGRYCGGMGNNDLGNDWQHSLVLATGSTDGSIHVFDLSNGQVIIFIFVLF
CFCFYEMAGKYIACIISYDKIFV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf