prot_P-littoralis_Contig1009.7.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1009.7.1
Unique Nameprot_P-littoralis_Contig1009.7.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length83
Homology
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BLAST of mRNA_P-littoralis_Contig1009.7.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 1.750e-12
Identity = 36/70 (51.43%), Postives = 45/70 (64.29%), Query Frame = 0 
Query:    1 MLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFNSRSTNGVIAKCVGAMDGLF 70
            + ++   +VIAKSTAY    RVI AIN    L C+WP    D ++ A  +  RSTNGVI +CVGAMDGLF
Sbjct:  124 VFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPYGD-DAEAQAELYRRRSTNGVIRRCVGAMDGLF 192
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1009.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K6M2_9PHAE1.750e-1251.43DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1009contigP-littoralis_Contig1009:8640..8888 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1009.7.1mRNA_P-littoralis_Contig1009.7.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1009 8585..8954 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1009.7.1 ID=prot_P-littoralis_Contig1009.7.1|Name=mRNA_P-littoralis_Contig1009.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=83bp
MLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGF
NSRSTNGVIAKCVGAMDGLFRPHPEAELPGHT*
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