Homology
BLAST of mRNA_P-littoralis_Contig1002.7.1 vs. uniprot
Match:
A0A6H5KFX7_9PHAE (Exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFX7_9PHAE)
HSP 1 Score: 91.7 bits (226), Expect = 1.240e-19
Identity = 52/89 (58.43%), Postives = 65/89 (73.03%), Query Frame = 0
Query: 2 FERRGYKVTVVFDGATPPAKQDTSQGRMKRREESASAARRLAVQGGASASEVNRMASASCVFDSRMNARLARRLRDLIQGEVYMAPGEA 90
FE RG+KVTVV DG+TPPAK+ TS+ R +RE +AS AR L GG +E+N+ AS +CVFDSR+ AR+A LR I GEVY+AP EA
Sbjct: 70 FESRGFKVTVVLDGSTPPAKKSTSEARRTKREAAASEARELQRTGGR-LTEINKKASNACVFDSRVVARVATLLRPQIAGEVYIAPREA 157
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1002.7.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
M F E R R G Y K V T V V F D G A T P P A K Q D T S Q G R M K R R E E S A S A A R R L A V Q G G A S A S E V N R M A S A S C V F D S R M N A R L A R R L R D L I Q G E V Y M A P G E A 10 20 30 40 50 60 70 80 90 Expect = 1.24e-19 / Id = 58.43 Sequence A0A6H5KFX7_9PHAE
Match Name E-value Identity Description
A0A6H5KFX7_9PHAE 1.240e-19 58.43 Exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M F E R R G Y K V T V V F D G A T P P A K Q D T S Q G R M K R R E E S A S A A R R L A V Q G G A S A S E V N R M A S A S C V F D S R M N A R L A R R L R D L I Q G E V Y M A P G E A 10 20 30 40 50 60 70 80 90 Expect = 5.7E-11 / Score = 44.5 Score = Score = Sequence G3DSA:3.40.50.1010 mobidb-lite SSF88723
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available GENE3D 3.40.50.1010 coord: 1..90 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 15..43 IPR029060 PIN-like domain superfamily SUPERFAMILY 88723 PIN domain-like coord: 2..90
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_P-littoralis_Contig1002.7.1 ID=prot_P-littoralis_Contig1002.7.1|Name=mRNA_P-littoralis_Contig1002.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=90bp back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR029060 PIN-like_dom_sf