prot_P-littoralis_Contig100.30.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig100.30.1
Unique Nameprot_P-littoralis_Contig100.30.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length361
Homology
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BLAST of mRNA_P-littoralis_Contig100.30.1 vs. uniprot
Match: D7FJY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJY1_ECTSI)

HSP 1 Score: 360 bits (924), Expect = 2.810e-121
Identity = 200/301 (66.45%), Postives = 219/301 (72.76%), Query Frame = 0 
Query:   51 LPPEELAASIRRCLNNMHGPEWHCVVGKVKAFSVHVRYWRGKSFLLMGAGLRIIVFQSAPPAPE--AHPPPPREEGEGIEQTPTNKSAERASIKVLRSEMEQGYQKRVLAMASAKAKEVGKAGDLDSLVAAIKASLTEMTGPVWHVVAARGAGDWGCSVAHEGGHRLDFKLNGDRIICWKHAQPPPSLADMFTLKLMSSLLFLATVVLLCVYVKFQGSCDRCCSSYPAVREKAGCATGPPSSDGESTAAGDIVPGVEGCDGDATEAADLCLVRSKILFFATCATMAGATALKWSDRSKLKR 349
            +PPEELAASIRRCLNNM                     WRGKSFL    GLRIIVFQSAPPAP+     P   E+    +Q PT K  ER SIKVLRSEMEQGYQKRVLAMASA A+E GK GDL+S+VAA+KASLTE TGPVWHV+A RGAGDWG SVAHE G  LDFKLNGDRI+CWKHAQ  P L DM T+K +S+ LF+AT++LLCVYVK QGSCDRCCSSYP  REKAGCA  P +S G    AGDIV  VEGCD D TE ADLCL  +KI  F TC TMAGATA KW+DRSK KR
Sbjct:    1 MPPEELAASIRRCLNNM---------------------WRGKSFLFEAEGLRIIVFQSAPPAPDDPLSSPQAHEQDAEAKQGPTAKGPERTSIKVLRSEMEQGYQKRVLAMASASAREHGKTGDLNSIVAALKASLTEFTGPVWHVMATRGAGDWGFSVAHEEGQLLDFKLNGDRILCWKHAQAAPGLTDMLTMKRISTFLFVATMLLLCVYVKLQGSCDRCCSSYPGAREKAGCAIAPTTSGG-GAGAGDIV--VEGCDVDVTEVADLCLRNAKIALFVTCGTMAGATAFKWADRSKAKR 277
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BLAST of mRNA_P-littoralis_Contig100.30.1 vs. uniprot
Match: A0A6H5KTS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTS5_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 5.590e-54
Identity = 96/140 (68.57%), Postives = 111/140 (79.29%), Query Frame = 0 
Query:    1 MGKTSKGKHATSVSQELTMHALGAVSKKTREQMRFERATRGAVQTLARLGLPPEELAASIRRCLNNMHGPEWHCVVGKVKAFSVHVRYWRGKSFLLMGAGLRIIVFQSAPPAPE--AHPPPPREEGEGIEQTPTNKSAER 138
            MGKT+KG+ A + +Q+L MH+L   +KKT+EQMRFE+AT+ AVQTLARLG+PPEELA SIRRCLNNMHGPEWHCV GKVKAFSVHVRYWRGKSFL    GLRIIVFQSAPPAP+     P   E+    +Q P+ K AER
Sbjct:    1 MGKTAKGRPAGTGAQDLKMHSLDVGNKKTKEQMRFEQATKEAVQTLARLGMPPEELAGSIRRCLNNMHGPEWHCVAGKVKAFSVHVRYWRGKSFLFEAEGLRIIVFQSAPPAPDDPLSSPQAHEQDAEPKQGPSAKGAER 140
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BLAST of mRNA_P-littoralis_Contig100.30.1 vs. uniprot
Match: A0A7S2Y009_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y009_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 3.880e-5
Identity = 24/60 (40.00%), Postives = 43/60 (71.67%), Query Frame = 0 
Query:   56 LAASIRRCLNNMHGPEWHCVVGKVKAFSVHVRYWRGKSFLLMGA--GLRIIVFQSAPPAP 113
            LA +I    N+++ PEW+CV+GK   F++ VR+WRG+ F+L  A  G+++++FQ++  +P
Sbjct:   71 LAKTISSYFNHIYHPEWNCVIGK--DFTMAVRHWRGRVFMLKSASLGVQVLLFQASTDSP 128
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig100.30.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FJY1_ECTSI2.810e-12166.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KTS5_9PHAE5.590e-5468.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2Y009_9STRA3.880e-540.00Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001372Dynein light chain, type 1/2SMARTSM01375Dynein_light_2coord: 136..229
e-value: 0.0015
score: 21.3
coord: 19..108
e-value: 0.019
score: 11.0
IPR001372Dynein light chain, type 1/2PFAMPF01221Dynein_lightcoord: 141..229
e-value: 3.1E-12
score: 46.7
IPR037177Dynein light chain superfamilyGENE3D3.30.740.10Protein Inhibitor Of Neuronal Nitric Oxide Synthase;coord: 7..109
e-value: 5.9E-7
score: 31.4
coord: 130..229
e-value: 6.6E-9
score: 37.7
IPR037177Dynein light chain superfamilySUPERFAMILY54648DLCcoord: 40..108
IPR037177Dynein light chain superfamilySUPERFAMILY54648DLCcoord: 139..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 110..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig100contigP-littoralis_Contig100:106053..117583 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig100.30.1mRNA_P-littoralis_Contig100.30.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig100 105985..118856 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig100.30.1 ID=prot_P-littoralis_Contig100.30.1|Name=mRNA_P-littoralis_Contig100.30.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=361bp
MGKTSKGKHATSVSQELTMHALGAVSKKTREQMRFERATRGAVQTLARLG
LPPEELAASIRRCLNNMHGPEWHCVVGKVKAFSVHVRYWRGKSFLLMGAG
LRIIVFQSAPPAPEAHPPPPREEGEGIEQTPTNKSAERASIKVLRSEMEQ
GYQKRVLAMASAKAKEVGKAGDLDSLVAAIKASLTEMTGPVWHVVAARGA
GDWGCSVAHEGGHRLDFKLNGDRIICWKHAQPPPSLADMFTLKLMSSLLF
LATVVLLCVYVKFQGSCDRCCSSYPAVREKAGCATGPPSSDGESTAAGDI
VPGVEGCDGDATEAADLCLVRSKILFFATCATMAGATALKWSDRSKLKRL
LERTRAPLTK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001372Dynein_light_chain_typ-1/2
IPR037177DLC_sf