prot_P-littoralis_Contig10.197.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig10.197.1
Unique Nameprot_P-littoralis_Contig10.197.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length218
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig10.197.1 vs. uniprot
Match: D7FQF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQF6_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 1.560e-45
Identity = 95/182 (52.20%), Postives = 114/182 (62.64%), Query Frame = 0 
Query:    7 GAGGGKLQETALSFTGVVTIITFCCCSTMSCVALCIKCVSWMVGHRGRRRRIFLLPEQGWRPDLGQNDDEEDGEELCPCRTPRTVIVLNTIPAEQRNGRVLQTSEIELREVPFGNIEEQXXXXXXXPSGNGDAAVVGEKGFNMMSGKQGQAGGLRLQRER---TGGSTMTRTGTPSMNGELE 185
            G GGG L+ETALSFTG+V+IITFCCCSTMSCVALCIK  SWM GHRGRR+R+ LLP +       QND E + +   P + P  VI+L+T PAEQR+G  L+ SEIELR+VPFGN+E Q        + +      G +       KQ    G   + ER   TG S MTR GTPS NGE E
Sbjct:    7 GGGGGGLRETALSFTGIVSIITFCCCSTMSCVALCIKLASWMFGHRGRRQRVPLLPHEQ------QNDGEAEEQLYYPHQQP--VIILDTNPAEQRSGCTLRASEIELRQVPFGNLEAQRETKNSDVNDDDVGFRTGAQADPNKIQKQQHLKGSASRMERDTTTGTSIMTRAGTPSTNGEQE 180
[Close]
BLAST of mRNA_P-littoralis_Contig10.197.1 vs. uniprot
Match: A0A6H5JCN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCN9_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 9.060e-45
Identity = 98/185 (52.97%), Postives = 115/185 (62.16%), Query Frame = 0 
Query:    7 GAGGGKLQETALSFTGVVTIITFCCCSTMSCVALCIKCVSWMVGHRGRRRRIFLLPEQGWRPDLGQNDDEEDGEELCPCRTPRTVIVLNTIPAEQRNGRVLQTSEIELREVPFGNIEEQXXXXXXXPSGNGDAAVV---GEKGFNMMSGKQGQAGGLRLQRER---TGGSTMTRTGTPSMNGELE 185
            G GGG L+ETALSFTG+++IITFCCCSTMSCVALCIK  SWM GHRGRR+R+ LLP +       QND E + +   P   P  VI+L+T  AE+R+G  L  SEIELR+VPFGN+E Q        S +GD  VV   G +       KQ    G   Q ER   TG S MTR GTPS NGE E
Sbjct:    7 GGGGGGLRETALSFTGIISIITFCCCSTMSCVALCIKLASWMFGHRGRRQRVPLLPHEQ------QNDGEAEEQLYSPHHQP--VIILDTNSAEKRSGYTLHASEIELRQVPFGNLEAQRETKN---SDDGDDDVVFLTGAQADPNKIRKQQHLKGSASQMERDTTTGTSIMTRAGTPSTNGEQE 180
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig10.197.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQF6_ECTSI1.560e-4552.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCN9_9PHAE9.060e-4552.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..217
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig10contigP-littoralis_Contig10:695181..695834 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig10.197.1mRNA_P-littoralis_Contig10.197.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig10 694939..697636 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig10.197.1 ID=prot_P-littoralis_Contig10.197.1|Name=mRNA_P-littoralis_Contig10.197.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=218bp
MWTQQNGAGGGKLQETALSFTGVVTIITFCCCSTMSCVALCIKCVSWMVG
HRGRRRRIFLLPEQGWRPDLGQNDDEEDGEELCPCRTPRTVIVLNTIPAE
QRNGRVLQTSEIELREVPFGNIEEQQQQQRRRPSGNGDAAVVGEKGFNMM
SGKQGQAGGLRLQRERTGGSTMTRTGTPSMNGELEQTPSSSSCEGNNQGE
GEDSADENRDAELRRPP*
back to top