prot_P-littoralis_Contig10.10.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig10.10.2
Unique Nameprot_P-littoralis_Contig10.10.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length301
Homology
BLAST of mRNA_P-littoralis_Contig10.10.2 vs. uniprot
Match: A0A6H5L288_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L288_9PHAE)

HSP 1 Score: 447 bits (1149), Expect = 3.220e-156
Identity = 222/300 (74.00%), Postives = 249/300 (83.00%), Query Frame = 0
Query:    1 MVPIGVSQAAAGVLAFILTDALLPQWEWRGLDVSATFLNISGSFVAGLAKGGGDAKEDSNSVEVQTAISIVMNGFLAVWTSLLFTVEHAAHLAVVTSPGAGALYLLGSILLGWGSYMLAHCLGRRWRVSRKAVDWAKRGPLWLCKGVESTALLGLVVAVAWGGWMTGQHPHRLGWGVVMAVIGGIVGSWFSGLNGGSEGRIKWGDWRCNALSFAGMVSVCRYAASLEREEREPLLESAFFVALIGQGFGTLSGFSDLSADAGNLALKRDYGGAAANIFLNIATAAVALLARLKAEKIFLS 300
            M  IG+SQAAA   AF+LTDAL+P WEW G+DVSAT LNISGSF AGLA GGG A EDS + EV+ A SIV++GFLAVWTSL F VEH AHLAVV S  AG  YLL SILLGWG Y+ AH  GRRWRVSRKAVDWAKRGPLW+CKG E TAL+  V A+AWG WM GQHPH+LGWG++MAV+GGI+G+WFS LNGG+EGRI WGDWRCNALSFAG+++  RYAASLE EERE  LESAFFVAL+ QGFGT+SGFSDLSADAG+LALK DY GAAAN+ LNIATA VAL AR KA KIF+S
Sbjct:    1 MATIGMSQAAAAATAFLLTDALVPVWEWNGVDVSATLLNISGSFFAGLANGGGMAPEDSKNSEVRAANSIVISGFLAVWTSLAFVVEHGAHLAVVASLEAGVGYLLVSILLGWGVYLQAHRWGRRWRVSRKAVDWAKRGPLWMCKGAEKTALVAAVAAMAWGSWMAGQHPHKLGWGIIMAVMGGIIGNWFSTLNGGAEGRIVWGDWRCNALSFAGVITAGRYAASLEPEEREATLESAFFVALVAQGFGTISGFSDLSADAGDLALKGDYWGAAANMLLNIATAVVALFARFKAAKIFIS 300          
BLAST of mRNA_P-littoralis_Contig10.10.2 vs. uniprot
Match: A0A7S3X1D9_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3X1D9_EMIHU)

HSP 1 Score: 55.1 bits (131), Expect = 1.690e-5
Identity = 47/135 (34.81%), Postives = 63/135 (46.67%), Query Frame = 0
Query:   10 AAGVLAFILTDALLPQWEWRGLDVSATFLNISGSFVAGLAKGGGDAKEDSNSVEVQTAISIVMNGFLAVWTSLLFTVEHAAHLAVVTSPGA-----GALYLLGSILLGWGSYMLAHCLGRRWRVSRKAVDWAKRG 139
            A G LA  LT    P      LDVSAT LNISG+F+AG+A     A    ++  + +A +    GF+ V+TS     E AA L   TSPG      GA Y+L        +   A  LG R +++ +    A  G
Sbjct:   54 AWGALAECLTSVFCPIVMVGALDVSATILNISGAFLAGIAH---SADATPSAPRLHSACATFQAGFIGVFTSFTVLFEQAARLD--TSPGCENRACGAGYVLAVFAAQLAAAAAAARLGGRGQLASRLAAAAAVG 183          
BLAST of mRNA_P-littoralis_Contig10.10.2 vs. uniprot
Match: R1DBE1_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DBE1_EMIHU)

HSP 1 Score: 54.3 bits (129), Expect = 3.490e-5
Identity = 41/105 (39.05%), Postives = 53/105 (50.48%), Query Frame = 0
Query:   10 AAGVLAFILTDALLPQWEWRGLDVSATFLNISGSFVAGLAKGGGDAKEDSNSVEVQTAISIVMNGFLAVWTSLLFTVEHAAHLAVVTSPGA-----GALYLLGSI 109
            A G LA  LT    P      LDVSAT LNISG+F+AG+A     A    ++  + +A +    GF+ V+TS     E AA L   TSPG      GA Y+L  +
Sbjct:   34 AWGALAECLTSVFCPIVMVGALDVSATILNISGAFLAGIAH---SADATPSAPRLHSACATFQAGFIGVFTSFTVLFEQAARLD--TSPGCENRACGAGYVLAEM 133          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig10.10.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L288_9PHAE3.220e-15674.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3X1D9_EMIHU1.690e-534.81Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
R1DBE1_EMIHU3.490e-539.05Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig10contigP-littoralis_Contig10:40352..45170 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig10.10.2mRNA_P-littoralis_Contig10.10.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig10 40222..45234 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig10.10.2 ID=prot_P-littoralis_Contig10.10.2|Name=mRNA_P-littoralis_Contig10.10.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=301bp
MVPIGVSQAAAGVLAFILTDALLPQWEWRGLDVSATFLNISGSFVAGLAK
GGGDAKEDSNSVEVQTAISIVMNGFLAVWTSLLFTVEHAAHLAVVTSPGA
GALYLLGSILLGWGSYMLAHCLGRRWRVSRKAVDWAKRGPLWLCKGVEST
ALLGLVVAVAWGGWMTGQHPHRLGWGVVMAVIGGIVGSWFSGLNGGSEGR
IKWGDWRCNALSFAGMVSVCRYAASLEREEREPLLESAFFVALIGQGFGT
LSGFSDLSADAGNLALKRDYGGAAANIFLNIATAAVALLARLKAEKIFLS
*
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