prot_P-littoralis_Contig1.370.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1.370.4
Unique Nameprot_P-littoralis_Contig1.370.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length469
Homology
BLAST of mRNA_P-littoralis_Contig1.370.4 vs. uniprot
Match: D8LI35_ECTSI (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI35_ECTSI)

HSP 1 Score: 719 bits (1855), Expect = 3.310e-258
Identity = 372/474 (78.48%), Postives = 396/474 (83.54%), Query Frame = 0
Query:    1 MDFGEASDDEADRRKVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTPFDMLVMGRFLRSSLRSVMQRYALSGEAVLEVEYLPALRQPTEAEHAEQPDWVSTAAGAGEGLETFVTGCYDGCLRVYGPDCKVTSLTKAHHLPVTALCAVPTWPPG--GGGHAAGFLSGSKDMTARLWRMAGSGSNASLEPVAVLRGHANSISAVHAVSAGAGS--GSAIVYTGDWSGRVCMWDAACLGEDSAEAESNGGXXXXXXXXXXXXXXXXXXXXXXXXXVSDQTIPLAAFRAHAQAVTGLAGPRGXXXXXXXXXA--AVTLYSASLDRAVKTWDAERQDCVHTLNAPKAVTCLGCSDSGRMLATGHPDARVRIWDTRKQGETLTRASLSSHKQWITDVKWAPGSETMVLSCAQDGAVKLWDIRSTLPLHSAQAHKGKALCCGWQDGKIISGGEDGAVKTYTVPERNND 468
            MDFGE SDDEAD  KVRVKFVTK+PSIRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTPFDMLVMGRFLRSSLRSVMQR+ALSGEAVLEVEYLPALRQPTEAEHA+QPDWVS  AGAG GLETFVTGCYDGCLRVYGP CKVTSL KAH  PVTALCAVP+   G  GG HAAGFLSGSKDMTARLWR AGSG N+SLE  A+LRGHANSISA HA ++G+G   G+   YTGDWSG VC+WD ACL    A+ +   G            XXXXX        V++ T PLA+FRAHAQAVTGLAGP G            + TLYSASLDRAVKTWDAERQDC+HTLNAPKAVTCLGCSDSGRMLATGHPDARVRIWDTR QGETLTRASLSSHKQW+T VKWAPGSETMVLSC+ DG+VKLWDIRSTLPLHSAQAH+GKALCCGWQDGKI+SGGEDGAVKTY VPERN+D
Sbjct:    1 MDFGEPSDDEADAGKVRVKFVTKVPSIRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTPFDMLVMGRFLRSSLRSVMQRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSAVAGAGAGLETFVTGCYDGCLRVYGPGCKVTSLEKAHQAPVTALCAVPSLAGGRPGGAHAAGFLSGSKDMTARLWRRAGSGGNSSLEAAAILRGHANSISAAHAAASGSGDSGGAPRAYTGDWSGHVCLWDVACLEGGHADGDDAQGTKRRKTDTGAAAXXXXX--------VTELT-PLASFRAHAQAVTGLAGPGGVGRPQTAAVVVPSSTLYSASLDRAVKTWDAERQDCLHTLNAPKAVTCLGCSDSGRMLATGHPDARVRIWDTRTQGETLTRASLSSHKQWVTGVKWAPGSETMVLSCSHDGSVKLWDIRSTLPLHSAQAHRGKALCCGWQDGKIVSGGEDGAVKTYVVPERNHD 465          
BLAST of mRNA_P-littoralis_Contig1.370.4 vs. uniprot
Match: A0A6H5KQ32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ32_9PHAE)

HSP 1 Score: 330 bits (845), Expect = 9.730e-109
Identity = 157/183 (85.79%), Postives = 163/183 (89.07%), Query Frame = 0
Query:  288 PLAAFRAHAQAVTGLAGPRGXXXXXXXXXA--AVTLYSASLDRAVKTWDAERQDCVHTLNAPKAVTCLGCSDSGRMLATGHPDARVRIWDTRKQGETLTRASLSSHKQWITDVKWAPGSETMVLSCAQDGAVKLWDIRSTLPLHSAQAHKGKALCCGWQDGKIISGGEDGAVKTYTVPERNND 468
            PLA FRAH+QAVTGL GP G            + TLYSASLDRAVKTWDAERQDC+HTLNAPKAVTCLGCSDSGRMLATGHPDARVRIWDTR QGETLTRASLSSHKQW+TDVKWAPGSETMVLSC  DGAVKLWDIRSTLPLHSAQAH+GKALCCGWQDGKI+SGGEDGAVKTY VPERNND
Sbjct:   33 PLAGFRAHSQAVTGLVGPGGVGGPQTAAVVVPSSTLYSASLDRAVKTWDAERQDCLHTLNAPKAVTCLGCSDSGRMLATGHPDARVRIWDTRTQGETLTRASLSSHKQWVTDVKWAPGSETMVLSCGHDGAVKLWDIRSTLPLHSAQAHQGKALCCGWQDGKIVSGGEDGAVKTYVVPERNND 215          
BLAST of mRNA_P-littoralis_Contig1.370.4 vs. uniprot
Match: A0A836CE58_9STRA (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE58_9STRA)

HSP 1 Score: 301 bits (770), Expect = 1.620e-93
Identity = 202/500 (40.40%), Postives = 251/500 (50.20%), Query Frame = 0
Query:   15 KVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGRDP-------------------PTPFDMLVMGRFLRSSLRSVMQRYALSGEAVLEVEYLPALRQPTEAEHAEQPDWVST----AAGAGEGLET-----FVTGCYDGCLRVYGPD--CKVTSLTKAHHLPVTALCAVPTWPPGGGGHAAGFLSGSKDMTARLWRMAGSGSNASL------------EPVAVLRGHANSISAVHAVSAGAGSGSAIVYTGDWSGRVCMWD-AACLGEDSAEAESNGGXXXXXXXXXXXXXXXXXXXXXXXXXVSDQTIPLAAFRAHAQAVTG--LAGPRGXXXXXXXXXAAVTLYSASLDRAVKTWDAERQDCVHTLNAPKAVTCL---GCSDSGR---MLATGHPDARVRIWDTR-KQGETLTRASLSSHKQWITDVKWAPGSETMVLSCAQDGAVKLWDIRSTLPLHSAQAHKGKALCCGWQDGKIISGGEDGAVKTYTV 462
            +VRVKFVTK+ SIRVT+ P+AVPE+L RYGLSEVVNHLLG +                    P PFD+L+ GRFLR+SL   M+ +A+SGE VLE+EYLPALRQPTE     QPDWVS     A  AG G E        + CYDGCLR+YG      +    +    P+TAL A                    D   R W +A                    E  AVL GH NS++AV    AG   G+    +GDW GR+C+WD AA  G   A+AE+ G                          V  +  P A F+AH+QAVTG  LAGP              TLY+ S D ++K WDA+RQDCV T+   KAV C+   G  D+     +LATGHPD R+R+WD R K GETLT A+L++   W+  VKWA GS                   S   L +  AHKG ALC  W  G + SGG+DG V+T+ V
Sbjct:   29 QVRVKFVTKLASIRVTDLPIAVPETLGRYGLSEVVNHLLGLNADTSAAAAAPHDAAPPSSKAPIPFDILIDGRFLRTSLARYMRAHAVSGETVLELEYLPALRQPTEESADTQPDWVSALAACAGAAGTGGERVAGPFLASACYDGCLRLYGASGGLDIAHSARVSAQPLTALAAXXX-----------XXXXXXDDAERCWLLAXXXXXXXXXXXXXXXXXXXXEQAAVLSGHQNSVAAVSFSPAG---GTHTAASGDWDGRMCLWDLAAAQGAAGADAEAGG-----------PGVKRRKRAAGEADAVVVELEPTAVFKAHSQAVTGVYLAGPD-------------TLYTGSWDHSLKAWDAQRQDCVRTMACAKAVACMDAQGGDDAAAASGLLATGHPDGRIRVWDVRTKAGETLTLATLAARGGWVYGVKWAHGSAYNXXXXXXXXXXXXXXXXSGAALRTLPAHKGAALCVAWHAGGVASGGDDGVVRTFKV 490          
BLAST of mRNA_P-littoralis_Contig1.370.4 vs. uniprot
Match: A0A8K1CSP5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CSP5_PYTOL)

HSP 1 Score: 251 bits (641), Expect = 3.360e-75
Identity = 166/455 (36.48%), Postives = 224/455 (49.23%), Query Frame = 0
Query:   15 KVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTPFDMLVMGRFLRSSLRSVMQRYALSGEAVLEVEYLPALRQPTEAEHAEQPDWVSTAAGAGEGLETFVTGCYDGCLRVYGPDCKVTSLTKAHHLPVTALCAVPTWPPGGGGHAAGFLSGSKDMTARLWRMAGSGSNASLEPVAVLRGHANSISAVHAVSAGAGSGSAIVYTGDWSGRVCMWDAACLGEDSAEAESNGGXXXXXXXXXXXXXXXXXXXXXXXXXVSDQTIPLAAFRAHAQAVTGLAGPRGXXXXXXXXXAAVTLYSASLDRAVKTWDAERQDCVHTLNAPKAVTCLGCSDSGRMLATGHPDARVRIWDTR--KQGETLTRASLSSHKQWITDVKWAPGSETMVLSCAQDGAVKLWDIRSTLPLHSAQAHKGKALCCGWQDGK-----IISGGEDGAVKTYTV 462
            +VRVKFVTK  +IRVTETP AVP  L R GLS+VVNHLL    P PFD L+ G FLR+SL   MQR A+S E++L +EY+ AL +P +      PDWVS  + A    +  VTGCYDG +RVY    +  +  KAH   V A+           G      S  KD   ++WR   + S+  L  VA L GH NS+  +   S G  +      TG W   V +W    L ED      N G                         V  + I       H   VTG+A                 + S + DR V+ WD     C  TL   +A+T +  + +G +L T HPD  VR+WD R  + GE + + +  SH +W++ V+W   +E +  SC  DGAVK+WD+RST+P+H+  AH+GKAL   W+         +SGGED  +K Y+V
Sbjct:    7 QVRVKFVTKNAAIRVTETPFAVPTRLNRQGLSQVVNHLLNTTTPRPFDFLIDGVFLRTSLDKYMQRNAVSEESLLILEYVEALPEPEQKNETNHPDWVSAVSVA---KDVIVTGCYDGQVRVYDLKGECLASVKAHQGAVKAVSVQFIQ-----GKEYRITSSGKDQMGQVWRF--NASSKQLSAVAALTGHLNSVDTIQLHSGGRQA-----LTGSWDNTVRVWH---LPEDD-----NAGEDDEAQPKKKQKNSAKSSGTVSFRQVEAEII----LTGHTSYVTGVA---------FHPTQEDYVVSGASDRTVRFWDLTTHLCKQTLTGNRAITDISVNANGLVL-TAHPDNCVRLWDPRASQSGENIVQKTFQSHTEWVSAVEWHQQNENLFASCGYDGAVKVWDVRSTVPIHTIAAHEGKALDVAWRPVSEPAVAFVSGGEDKQLKVYSV 424          
BLAST of mRNA_P-littoralis_Contig1.370.4 vs. uniprot
Match: A0A2D4C6Q8_PYTIN (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6Q8_PYTIN)

HSP 1 Score: 255 bits (652), Expect = 5.720e-75
Identity = 170/468 (36.32%), Postives = 234/468 (50.00%), Query Frame = 0
Query:   15 KVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTPFDMLVMGRFLRSSLRSVMQRYALSGEAVLEVEYLPALRQPTEAEHAEQPDWVSTAAGAGEGLETFVTGCYDGCLRVYGPDCKVTSLTKAHHLPVTALCAVPTWPPGGGGHAAGFLSGSKDMTARLWRMAGSGSNASLEPVAVLRGHANSISAVHAVSAGAGSGSAIVYTGDWSGRVCMW------------DAACLGEDSAEAESNGGXXXXXXXXXXXXXXXXXXXXXXXXXVS-DQTIPLAAFRAHAQAVTGLAGPRGXXXXXXXXXAAVTLYSASLDRAVKTWDAERQDCVHTLNAPKAVTCLGCSDSGRMLATGHPDARVRIWDTR--KQGETLTRASLSSHKQWITDVKWAPGSETMVLSCAQDGAVKLWDIRSTLPLHSAQAHKGKALCCGWQDG-----KIISGGEDGAVKTYTV 462
            +VRVKFVTK  +IRVTETP AVP  L R GLS+VVNHLL    P PFD L+ G FLR+SL   MQR+ALS E++L +EY+ AL +P++      PDWVS  + A    +  VTGCYDG +RVY  +    +  KAH   V A+            +     S  KD   ++WR   + +   L  VA L GH NS+ A+ A+ A A        TG W   V +W            DA    +  ++A+S+G                          VS  Q         H   VTG+A              A  + SA  DR+++ WD     C  T+   +A+T +  + +G M+ T HPD  VR+WD R  + GE+L + +  SH++W+  V W P +E + LS   DGAVK+WD+RST+PLH+  AH GKAL   W+         +SGGED  +K ++V
Sbjct:  175 QVRVKFVTKNAAIRVTETPFAVPMRLNRQGLSQVVNHLLNTAEPRPFDFLIDGNFLRTSLEKYMQRHALSEESMLTLEYVEALPEPSQKNETNHPDWVSAVSAA---QDIVVTGCYDGQVRVYDLEGNCLASVKAHQGAVKAVSVQLAKQ-----NVFLITSSGKDQMGQVWRF--NAATRQLSAVASLTGHLNSVDAI-ALDARAER----ALTGSWDNTVRVWMVPSGSEAVEVSDAQPKKKQKSDAKSSG-------------------------VVSFSQLEAEIVLVGHTSYVTGVA---------FHPTDAHQVVSAGSDRSIRLWDLTTHQCKQTMKGNRAITSVSVNANG-MVVTAHPDHCVRLWDPRATQNGESLVQRTFQSHREWVNAVSWHPTNEHLFLSGGYDGAVKVWDVRSTIPLHTVAAHDGKALDVAWRPVDEPAVSFVSGGEDKQLKLFSV 592          
BLAST of mRNA_P-littoralis_Contig1.370.4 vs. uniprot
Match: D0NDP0_PHYIT (Ribosome biogenesis protein WDR12 homolog n=12 Tax=Phytophthora TaxID=4783 RepID=D0NDP0_PHYIT)

HSP 1 Score: 242 bits (617), Expect = 1.330e-71
Identity = 171/461 (37.09%), Postives = 232/461 (50.33%), Query Frame = 0
Query:   15 KVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGR-DPPTPFDMLVMGRFLRSSLRSVMQRYALSGEAVLEVEYLPALRQPTEAEHAEQPDWVSTAAGAGEGLETFVTGCYDGCLRVYGP--DCKVTSLTKAHHLPVTALCAVPTWPPGGGGHAAGFL--SGSKDMTARLWRMAGSGSNASLEPVAVLRGHANSISAVHAVSAGAGSGSAIVYTGDWSGRVCMWDAACLGEDSAEAESNGGXXXXXXXXXXXXXXXXXXXXXXXXXVSDQTIPLA-AFRAHAQAVTGLA-GPRGXXXXXXXXXAAVTLYSASLDRAVKTWDAERQDCVHTLNAPKAVTCLGCSDSGRMLATGHPDARVRIWDTRKQ--GETLTRASLSSHKQWITDVKWAPGSETMVLSCAQDGAVKLWDIRSTLPLHSAQAHKGKALCCGWQDGK----IISGGEDGAVKTYTV 462
            +VRVKFVTK  SIRVTETP AVP  L R GLS+VVNHLL   D P PFD L+ G FLRSSL   +Q   +S EA+L +EY+ AL +P +   ++ PDWVS  A   +  E  VTGCYDG LRVY    DCK +   KAH   V A+    +        +  F+  S  KD  A+LWR     S   L P+A L GH NS+ AV   +    SG+ +V TG W   V +W      EDS+E  S+                           VS + +        H   VTG+A  P+              + SA  DR+V+ WD   Q C   L   +AV+ L  + +G +L T HP         R Q  GE++ + +  SHK+W++ V W P +E + +S   DG  K+WD RST+PLH+  AH+GK L   W++ +     ++GG+D  +  + V
Sbjct:    7 QVRVKFVTKDGSIRVTETPFAVPSRLNRRGLSQVVNHLLATGDSPRPFDFLIDGLFLRSSLDKYLQTNDVSEEALLTLEYVEALPEPQKQNGSDHPDWVSAVASLDD--ELVVTGCYDGVLRVYDAQGDCKAS--VKAHQGAVKAVSVSSS-------KSGEFVVASSGKDQLAQLWRYTVKSSK--LSPLAALTGHLNSVDAVQLHA----SGNRVV-TGSWDNTVRVWQTPNGSEDSSEQRSS---------------KKHKKTEDDAGAVSFRQLEAEIVLVGHTSYVTGVAFRPKTSEHDED------VVVSAGSDRSVRLWDLVTQSCSQALAGNRAVSDLTVNATGLIL-TAHPXXXXXXXXPRAQQSGESIVQRTFRSHKEWVSSVSWHPSNEHLFVSGGYDGTAKVWDARSTIPLHTVSAHEGKVLDLSWRNQEESVAFVTGGDDKKLNFFNV 427          
BLAST of mRNA_P-littoralis_Contig1.370.4 vs. uniprot
Match: A0A5D6YFB0_9STRA (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YFB0_9STRA)

HSP 1 Score: 241 bits (616), Expect = 2.200e-71
Identity = 176/457 (38.51%), Postives = 241/457 (52.74%), Query Frame = 0
Query:   15 KVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTPFDMLVMGRFLRSSLRSVMQRYALSGEAVLEVEYLPALRQPTEAEHAEQPDWVSTAAGAGEGLETFVTGCYDGCLRVYGPDCKVTSLTKAHHLPVTALCA--VPTWPPGGGGHAAGFLSGSKDMTARLWRMAGSGSNASLEPVAVLRGHANSISAVHAVSAGAGSGSAIVYTGDWSGRVCMWDAACLGEDSAEAESNGGXXXXXXXXXXXXXXXXXXXXXXXXXVSDQTIPLAAFRAHAQAVTGLAGPRGXXXXXXXXXAAVTLYSASLDRAVKTWDAERQDCVHTLNAPKAVTCLGCSDSGRMLATGHPDARVRIWDTR--KQGETLTRASLSSHKQWITDVKWAPGSETMVLSCAQDGAVKLWDIRSTLPLHSAQAHKGKALCCGW--QDGKII---SGGEDGAVKTYTV 462
            +VRVKFVTK  +IRVTETP AVP  L R GLS+VVNHLL    P PFD LV G+FLR+SL   + ++  S EA+L +EY+ AL +P +   A  PDWVS  A A  GL   VTGCYDG +RV+    +  +  KAHH  V A+    VP              +  KD T +LW      +   +  +A   GH NS+ AV     G  +      TG W   V +WD       +A + +   XXXXXXXXXXXXXX           +  + + +     H   VTG+A                 + S + DR+V+ WD     C  TL   +A+T +  +  G +L+  HPD  VR+WD R  + GE+L + + SSHK+W++ V+W P   T+  S + DG+VK+WD RS++PLH+  AH GKAL   W  +D   +   SGGED  +K ++V
Sbjct:   10 QVRVKFVTKDAAIRVTETPFAVPARLNRQGLSQVVNHLLNLPVPRPFDFLVDGQFLRTSLEKYLLQHGASEEALLTLEYVEALPEPEKQREANHPDWVSAVAAAHTGL--VVTGCYDGHVRVHDAAGECVAALKAHHGAVKAVSVQRVPEKK-----REFVIATSGKDQTGQLWLF--DAAKKRISALAAFTGHLNSVDAVALRVTGEQA-----LTGSWDNTVRVWDTK-----AAVSAAXXXXXXXXXXXXXXXXXASGASAVSFRQLEAEVVLVG----HTSFVTGVA---------FHPQHEHLVVSGASDRSVRVWDLTTHSCAQTLTGNRAITDISVNADGLVLSA-HPDHCVRLWDPRASQAGESLVQRTFSSHKEWVSAVEWHPTRATLFASASYDGSVKVWDARSSVPLHTLAAHDGKALDVAWRLEDAAHVAFASGGEDKQLKFFSV 433          
BLAST of mRNA_P-littoralis_Contig1.370.4 vs. uniprot
Match: A0A1V9ZBE6_9STRA (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZBE6_9STRA)

HSP 1 Score: 239 bits (611), Expect = 6.090e-71
Identity = 162/452 (35.84%), Postives = 220/452 (48.67%), Query Frame = 0
Query:   15 KVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTPFDMLVMGRFLRSSLRSVMQRYALSGEAVLEVEYLPALRQPTEAEHAEQPDWVSTAAGAGEGLETFV-TGCYDGCLRVYGPDCKVTSLTKAHHLPVTALCAVPTWPPGGGGHAAGFLSGSKDMTARLWRMAGSGSNASLEPVAVLRGHANSISAVHAVSAGAGSGSAIVYTGDWSGRVCMWDAACLGEDSAEAESNGGXXXXXXXXXXXXXXXXXXXXXXXXXVSDQTIPLAAFRAHAQAVTGLAGPRGXXXXXXXXXAAVTLYSASLDRAVKTWDAERQDCVHTLNAPKAVTCLGCSDSGRMLATGHPDARVRIWDTR--KQGETLTRASLSSHKQWITDVKWAPGSETMVLSCAQDGAVKLWDIRSTLPLHSAQAHKGKALCCGWQDGK---IISGGEDGAVKTY 460
            ++RVKFVTK P IRVTETP AVP  L R GLS+VVNHLL    P PFD L+   FLR++L   + +  L+ EAVLE+EY+ A  +P      + PDW+S  A  G     FV TGCYDG LRV+       +  KAH   + ++            +    ++GSKD T + W++    SN  L  V V  GH NS+  V           AI   GD++              +AEAE+                             ++  + L    A   AVT                 + T YSA++DR++K WD   + C  T+     ++ L  S SG M+ T HPD  +R+WD R  K G TL + +  SHKQW++ V+W+  SET  LS   DG VK+WD RS++PL +  AH GKAL   W  G+    +SGGED  +K Y
Sbjct:    7 QIRVKFVTKNPEIRVTETPFAVPIKLARAGLSQVVNHLLATAEPKPFDFLIDDNFLRTTLEKYVVQNNLNDEAVLELEYVEAHLEPETKHSQDHPDWISAVAAHGG----FVATGCYDGILRVFTTAGAPVAQIKAHDSVIKSVAM----------NGNTIVTGSKDHTLKTWKL----SNGKLTAVGVGAGHLNSVDTV-----------AIDAEGDFALXXXXXXXXXXXSLAAEAEAT---------DKSVKKQKTAGGTKASLVQAEAKLVLPGHTAAVVAVT------------FDPTDSSTAYSAAMDRSIKLWDLSLERCKQTMAGSSTISALSVSTSG-MVLTAHPDTAIRLWDPRAAKTGTTLVQKTFQSHKQWVSAVQWS--SETQFLSAGYDGTVKMWDARSSIPLFTLAAHAGKALDAAWIQGEKPAFVSGGEDCQLKFY 405          
BLAST of mRNA_P-littoralis_Contig1.370.4 vs. uniprot
Match: A0A1Y1IFE5_KLENI (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IFE5_KLENI)

HSP 1 Score: 238 bits (607), Expect = 3.800e-70
Identity = 151/454 (33.26%), Postives = 218/454 (48.02%), Query Frame = 0
Query:   12 DRRKVRVKFVTKIPS-IRVTETPVAVPESLQRYGLSEVVNHLLGRDPPTPFDMLVMGRFLRSSLRSVMQRYALSGEAVLEVEYLPALRQPTEAEHAEQPDWVSTAAGAGEGLETFVTGCYDGCLRVYGPDCKVTSLTKAHHLPVTALCAVPTWPPGGGGHAAGFLSGSKDMTARLWRMAGSGSNASLEPVAVLRGHANSISAVHAVSAGAGSGSAIVYTGDWSGRVCMWDAACLGEDSAEAESNGGXXXXXXXXXXXXXXXXXXXXXXXXXVSDQTIPLAAFRAHAQAVTGLAGPRGXXXXXXXXXAAVTLYSASLDRAVKTWDAERQDCVHTLNAPKAVTCLGCS-DSGRMLATGHPDARVRIWDTRKQGETLTRASLSSHKQWITDVKWAPGSETMVLSCAQDGAVKLWDIRSTLPLHSAQAHKGKALCCGW-QDGKIISGGEDGAVKTYTV 462
            + R+V+V+FVTK+P   RVT    AVP  L RYGLSEV+N LL  +   PFD LV G  LR+SL S++    LS E  L +EY+PA+  P         DWVS   G     +  V+GCYDG  R++    +  +  + H   +T+   +P         +   ++ SKD T R+W++ G+ S  S +   VLRGH+ +I +V A  +G       V +G W   + +W  +   ED   A                                +          H+Q V+ +   R           A T++SAS D +V+TWD +      T+   K +  L    + G +LATG  D  +RIWD+R    T +   L SHK WIT VKW       +LS + DG VK+WD+RS +PLH+ QAH  KALC  W Q+  I+SGG D  ++ + +
Sbjct:    7 EERQVQVRFVTKLPEEYRVTNASFAVPARLTRYGLSEVINSLLSTEKLRPFDFLVGGELLRTSLESLLVSKKLSAETTLTIEYIPAVGLPKPVSSHVHDDWVSAINGTSP--DVLVSGCYDGVARLWSSSGEALTSLQGHSDAITSTAVIPR-----ASGSCDVITASKDRTLRVWQVKGTDSQPSGDLHQVLRGHSAAIQSVVASPSGNE-----VASGSWDTTIKVWSVSRDAEDGGSAPKR---------------QRVEDSGAAPAGEQEAREARVTLEGHSQCVSAVDWSR-----------ADTIHSASWDHSVRTWDVQAAVNTSTITGSKVILALSVGGEGGALLATGGADPAIRIWDSRDSSSTGSAIQLLSHKGWITAVKWHKTRTHQLLSTSHDGTVKMWDVRSKVPLHTVQAHTVKALCVDWFQEATIVSGGADNQLRFHAL 422          
BLAST of mRNA_P-littoralis_Contig1.370.4 vs. uniprot
Match: A0A3F2RMV9_9STRA (Ribosome biogenesis protein WDR12 homolog n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RMV9_9STRA)

HSP 1 Score: 236 bits (602), Expect = 2.520e-69
Identity = 169/464 (36.42%), Postives = 226/464 (48.71%), Query Frame = 0
Query:   15 KVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVNHLLGR-DPPTPFDMLVMGRFLRSSLRSVMQRYALSGEAVLEVEYLPALRQPTEAEHAEQPDWVSTAAGAGEGLETFVTGCYDGCLRVYGP--DCKVTSLTKAHHLPVTALCAVPTWPPGGGGHAAGFLSGSKDMTARLWRMAGSGSNASLEPVAVLRGHANSISAVHAVSAGAGSGSAIVYTGDWSGRVCMWDAACLGEDSAEAESNGGXXXXXXXXXXXXXXXXXXXXXXXXXVSDQTIPLA-AFRAHAQAVTGLA-GPRGXXXXXXXXXAAVTLYSASLDRAVKTWDAERQDCVHTLNAPKAVTCLGCSDSGRMLATGHPDARVRIWDTRKQ--GETLTRASLSSHKQWITDVKWAP--GSETMVLSCAQDGAVKLWDIRSTLPLHSAQAHKGKALCCGWQDGK-------IISGGEDGAVKTYTV 462
            +VRVKFVT   SIRVTETP AVP  L R GLS+VVNHLL   D P PFD L+ G FLRS+L   +Q   +S EA+L ++Y+ AL +P +    + PDWVS  A   +  E  VTGCYDG LRVY    DCK +   KAH   + A+    +   G         S  KD  A+LW    S     L P+A L GH NS+ AV   ++G       V T  W   V +W A    E++ E  S                             S Q +        H   VTG+A  P+              L SA  DR V+ WD   Q C  +L   +AV+ L  + SG +L T HPD  VR+WD R Q  G+ + + +  SHK+W++ V W P   +E + +S   DG  K+WD RST+PLH+ +AH GK L   W++           +GG+D  +  ++V
Sbjct:    7 QVRVKFVTNDASIRVTETPFAVPTRLSRRGLSQVVNHLLNTGDKPRPFDFLIDGLFLRSTLSKYLQTSEVSEEALLTLQYVEALPEPQKQNSNDHPDWVSAVASIDD--ELVVTGCYDGVLRVYDAQGDCKAS--VKAHQGAIKAVSVATSEKSG----KFIIASSGKDQLAQLWTF--SIKTEKLAPMAALTGHLNSVDAVQMHASGKR-----VVTASWDNTVRVWKAPSS-EEAGEQRS---------------AKKHKKTASGAGAASFQQLEAEMVLVGHTSFVTGVAFRPKESEHDED------VLVSAGSDRTVRLWDLVTQSCSQSLVGNRAVSDLSVNASGLIL-TAHPDHCVRLWDPRAQQNGDNIVQCTFHSHKEWVSSVAWHPDISNEHLFVSGGYDGTAKVWDARSTIPLHTVKAHDGKLLALSWRNQTKENSSMAFATGGDDKQLNFFSV 432          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.370.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI35_ECTSI3.310e-25878.48Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A6H5KQ32_9PHAE9.730e-10985.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CE58_9STRA1.620e-9340.40Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A8K1CSP5_PYTOL3.360e-7536.48Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4C6Q8_PYTIN5.720e-7536.32Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
D0NDP0_PHYIT1.330e-7137.09Ribosome biogenesis protein WDR12 homolog n=12 Tax... [more]
A0A5D6YFB0_9STRA2.200e-7138.51Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A1V9ZBE6_9STRA6.090e-7135.84Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A1Y1IFE5_KLENI3.800e-7033.26Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A3F2RMV9_9STRA2.520e-6936.42Ribosome biogenesis protein WDR12 homolog n=3 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 321..335
score: 36.66
coord: 362..376
score: 34.61
coord: 408..422
score: 33.98
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 337..375
e-value: 2.7E-6
score: 36.9
coord: 98..138
e-value: 43.0
score: 6.7
coord: 196..240
e-value: 0.42
score: 19.4
coord: 285..334
e-value: 3.8
score: 13.4
coord: 424..461
e-value: 1.5
score: 15.8
coord: 381..421
e-value: 2.4E-6
score: 37.1
coord: 139..187
e-value: 0.97
score: 17.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 198..240
e-value: 0.14
score: 13.1
coord: 339..375
e-value: 1.3E-4
score: 22.7
coord: 387..421
e-value: 2.3E-4
score: 21.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 350..384
score: 9.706414
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 388..430
score: 13.315579
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 92..465
e-value: 5.4E-56
score: 191.8
IPR012972NLEPFAMPF08154NLEcoord: 16..76
e-value: 1.5E-17
score: 63.8
NoneNo IPR availablePANTHERPTHR19855:SF11RIBOSOME BIOGENESIS PROTEIN WDR12coord: 11..465
NoneNo IPR availablePANTHERPTHR19855WD40 REPEAT PROTEIN 12, 37coord: 11..465
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 388..424
score: 10.68014
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 408..422
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 362..376
IPR028599WD repeat WDR12/Ytm1HAMAPMF_03029WDR12coord: 10..464
score: 26.114185
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 123..463

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1contigP-littoralis_Contig1:1616340..1622204 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1.370.4mRNA_P-littoralis_Contig1.370.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig1 1615945..1622255 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1.370.4 ID=prot_P-littoralis_Contig1.370.4|Name=mRNA_P-littoralis_Contig1.370.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=469bp
MDFGEASDDEADRRKVRVKFVTKIPSIRVTETPVAVPESLQRYGLSEVVN
HLLGRDPPTPFDMLVMGRFLRSSLRSVMQRYALSGEAVLEVEYLPALRQP
TEAEHAEQPDWVSTAAGAGEGLETFVTGCYDGCLRVYGPDCKVTSLTKAH
HLPVTALCAVPTWPPGGGGHAAGFLSGSKDMTARLWRMAGSGSNASLEPV
AVLRGHANSISAVHAVSAGAGSGSAIVYTGDWSGRVCMWDAACLGEDSAE
AESNGGGASATQGAKRRKTGESGSAAAAAAAVSDQTIPLAAFRAHAQAVT
GLAGPRGGGGGGGGQAAAVTLYSASLDRAVKTWDAERQDCVHTLNAPKAV
TCLGCSDSGRMLATGHPDARVRIWDTRKQGETLTRASLSSHKQWITDVKW
APGSETMVLSCAQDGAVKLWDIRSTLPLHSAQAHKGKALCCGWQDGKIIS
GGEDGAVKTYTVPERNND*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR012972NLE
IPR019775WD40_repeat_CS
IPR028599WDR12/Ytm1
IPR036322WD40_repeat_dom_sf