mRNA_P-littoralis_Contig634.1.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig634.1.1
Unique NamemRNA_P-littoralis_Contig634.1.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig634.1.1 vs. uniprot
Match: D7FT81_ECTSI (RPOL4c domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT81_ECTSI)

HSP 1 Score: 247 bits (630), Expect = 9.300e-81
Identity = 122/151 (80.79%), Postives = 139/151 (92.05%), Query Frame = 1
Query:  226 MEGVDDEENANLLQFGPEHAKEQMSCLSNAEVAMILEKQRGNYEEKDINVTPSFAKTMTYVKRFGS-GGAANNSATHELRETLQEFEVFHDGEAIRLHQFEIMQVANLMQADSEVEEVLALIPSMGARLTEEDIDNVLGIVRKHQQSRIYS 675
            MEGVDDEENANLLQFGPEHAK+ MSCLSNAEV+++LEKQR NYEEKDINVTP+F+KTM+YVKRFG  GG+   +AT ELRE LQ+FE FH+GE+IRLHQFEIMQVANLMQADSEVEEVLALIPS+GARLTEED++N+L IVRKHQ SR+YS
Sbjct:    1 MEGVDDEENANLLQFGPEHAKDDMSCLSNAEVSVVLEKQRINYEEKDINVTPAFSKTMSYVKRFGGLGGSVKMTATSELREALQQFETFHEGESIRLHQFEIMQVANLMQADSEVEEVLALIPSLGARLTEEDLENILAIVRKHQHSRLYS 151          
BLAST of mRNA_P-littoralis_Contig634.1.1 vs. uniprot
Match: A0A835YSR6_9STRA (HRDC-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSR6_9STRA)

HSP 1 Score: 104 bits (260), Expect = 6.240e-25
Identity = 58/140 (41.43%), Postives = 85/140 (60.71%), Query Frame = 1
Query:  247 ENANLLQFGPEHAKEQMSCLSNAEVAMILEKQRGNYEEKDINVTPSFAKTMTYVKRFGSGGAANNSATHELRETLQEFEVFHDGEAIRLHQFEIMQVANLMQADSEVEEVLALIPSMGARLTEEDIDNVLGIVRKHQQSR 666
            EN N L+FGP    E++ CL++ EV  IL       +  D+  T ++ KT+ +VKRFG+     ++ T ELR+ L+ FE   D     LH +EI+ + NLMQADS V+E +ALIPS+  +  EEDI+ +L I+RK   +R
Sbjct:   10 ENVNTLKFGP--GFEEIQCLTHTEVYQIL-----TSKTHDVQRTQAYTKTIEHVKRFGTADDEKHAITTELRQALETFERDTDQGTETLHSYEIVSLCNLMQADSTVDEAIALIPSLSRKFKEEDIEALLDIIRKANAAR 142          
BLAST of mRNA_P-littoralis_Contig634.1.1 vs. uniprot
Match: A0A3M6VV57_9STRA (RPOL4c domain-containing protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A3M6VV57_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 2.130e-22
Identity = 64/145 (44.14%), Postives = 89/145 (61.38%), Query Frame = 1
Query:  235 VDDEENANLLQFGPEHAKEQMSCLSNAEVAMILEKQRGNYEEKDINVTPSFAKTMTYVKRFGS--GGAANNSATHELRETLQE--FEVFHDGEAI--RLHQFEIMQVANLMQADSEVEEVLALIPSMGARLTEEDIDNVLGIVRK 651
            V D E+A  L  G +   E  +CLSNAEVA+ILEKQ+ +YE ++  +T  F KT +YV+RF       AN ++  ELRE L    F+   DGE +  RL +FEI  ++NL     EVEE +ALIPS+  R  E++I+ +LGIV +
Sbjct:    8 VVDTEDAAELNLGGDFRNE--TCLSNAEVAVILEKQKSDYETQEKQLTNVFQKTYSYVQRFSGTKDPVANQASVTELREALMSLAFQREEDGETVEYRLEEFEIACLSNLNP--EEVEEAVALIPSLQKRFAEDEIEEILGIVSR 148          
BLAST of mRNA_P-littoralis_Contig634.1.1 vs. uniprot
Match: H3GHD4_PHYRM (RPOL4c domain-containing protein n=23 Tax=Oomycota TaxID=4762 RepID=H3GHD4_PHYRM)

HSP 1 Score: 97.4 bits (241), Expect = 5.930e-22
Identity = 63/145 (43.45%), Postives = 89/145 (61.38%), Query Frame = 1
Query:  235 VDDEENANLLQFGPEHAKEQMSCLSNAEVAMILEKQRGNYEEKDINVTPSFAKTMTYVKRFGS--GGAANNSATHELRETLQE--FEVFHDGEAI--RLHQFEIMQVANLMQADSEVEEVLALIPSMGARLTEEDIDNVLGIVRK 651
            V D E+A  L  G +   E  +CLSNAEVA+ILEKQ+ +YE ++  +T  F KT +YV+RF       AN ++  ELRE L    F+   +GE +  RL +FEI  ++NL     EVEE +ALIPS+  R  E++I+ +LGIV +
Sbjct:    8 VVDTEDAAELNLGDDFRNE--TCLSNAEVAVILEKQKSDYETQEKQLTNVFQKTYSYVQRFSGTKDPVANQASVTELREALMSLAFQREEEGETVEYRLEEFEIACLSNLNP--EEVEEAVALIPSLHKRFAEDEIEEILGIVSR 148          
BLAST of mRNA_P-littoralis_Contig634.1.1 vs. uniprot
Match: A0A8K1FR52_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FR52_PYTOL)

HSP 1 Score: 95.5 bits (236), Expect = 3.260e-21
Identity = 61/145 (42.07%), Postives = 89/145 (61.38%), Query Frame = 1
Query:  235 VDDEENANLLQFGPEHAKEQMSCLSNAEVAMILEKQRGNYEEKDINVTPSFAKTMTYVKRFGS--GGAANNSATHELRETLQE--FEVFHDGEA--IRLHQFEIMQVANLMQADSEVEEVLALIPSMGARLTEEDIDNVLGIVRK 651
            V D E+A  L  G +   E  +CLSNAEVA+ILEKQ+ +YE ++  +T  F KT +YV+RF       +N ++  ELRE L    F+   DG+   +RL +FEI  ++NL     EVEE +AL+PS+  R  E++I+ +LGIV +
Sbjct:    8 VIDTEDAAELNLGDDFRHE--TCLSNAEVAVILEKQKSDYENQEKQLTGVFQKTYSYVQRFSGTKDPVSNQASVTELREALMSLAFQREEDGQVTEVRLEEFEIACLSNLNP--EEVEESVALVPSLQKRFAEDEIEEILGIVSR 148          
BLAST of mRNA_P-littoralis_Contig634.1.1 vs. uniprot
Match: A0A024TL56_9STRA (RPOL4c domain-containing protein n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024TL56_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 5.360e-21
Identity = 62/154 (40.26%), Postives = 90/154 (58.44%), Query Frame = 1
Query:  241 DEENANLLQFGPEHAKEQMSCLSNAEVAMILEKQRGNYEEKDINVTPSFAKTMTYVKRFGS--GGAANNSATHELRETLQEFEVFHDGE-------AIRLHQFEIMQVANLMQADSEVEEVLALIPSMGARLTEEDIDNVLGIVRKHQQSRIYS 675
            D E+A  L  G +  +E  +CLSNAEVA+ILEKQ+ +YE  +  +T  F KT +YV+RF       AN ++  ELRE L  +E   +          +RL +FEI  ++NL     E EE +ALIPS+  + TEEDID +L I+ +   +R+Y+
Sbjct:   13 DTEDAAELNLGEDFQQE--TCLSNAEVAVILEKQKSDYESSEKPLTSVFQKTYSYVQRFSGTKDPVANQASVTELREALITYEFTRESPDDPSQAIEVRLEEFEIACLSNLNP--EEPEEAMALIPSLNKKFTEEDIDEILQIIAR-TTARMYA 161          
BLAST of mRNA_P-littoralis_Contig634.1.1 vs. uniprot
Match: F0W0U0_9STRA (Uncharacterized protein AlNc14C5G725 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W0U0_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 9.070e-21
Identity = 63/152 (41.45%), Postives = 91/152 (59.87%), Query Frame = 1
Query:  235 VDDEENANLLQFGPEHAKEQMSCLSNAEVAMILEKQRGNYEEKDINVTPSFAKTMTYVKRFGS--GGAANNSATHELRETLQEF----EVFHDGEAIRLHQFEIMQVANLMQADSEVEEVLALIPSMGARLTEEDIDNVLGIVRKHQQSRIY 672
            V D E+A  L  G +   E  +CLSNAEVA+ILEKQ+ +YE ++  +T  F KT +YV+RF       +N ++  ELRE L       E+      IRL +FEI  ++NL     EVEE ++LIPS+  R  EE+I+ +LGIV + + +R+Y
Sbjct:    8 VVDTEDAAELNLGEDFRDE--TCLSNAEVAVILEKQKQDYENQEKQLTNVFQKTYSYVQRFSGTKDPVSNQASVTELREALMSLVFNREIDERVVEIRLEEFEISCLSNLNP--EEVEEAVSLIPSLSKRYAEEEIEEILGIVSR-KAARMY 154          
BLAST of mRNA_P-littoralis_Contig634.1.1 vs. uniprot
Match: A0A3F2S3S1_9STRA (Helicase C-terminal domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S3S1_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 7.720e-20
Identity = 63/143 (44.06%), Postives = 88/143 (61.54%), Query Frame = 1
Query:  235 VDDEENANLLQFGPEHAKEQMSCLSNAEVAMILEKQRGNYEEKDINVTPSFAKTMTYVKRFGS--GGAANNSATHELRETLQE--FEVFHDGEAI--RLHQFEIMQVANLMQADSEVEEVLALIPSMGARLTEEDIDNVLGIV 645
            V D E+A  L  G +   E  +CLSNAEVA+ILEKQ+ +YE ++  +T  F KT +YV+RF       AN ++  ELRE L    F+   +GE +  RL +FEI  ++NL     EVEE +ALIPS+  R  E++I+ +LGIV
Sbjct:    8 VVDTEDAAELNLGDDFRNE--TCLSNAEVAVILEKQKSDYETQEKQLTNVFQKTYSYVQRFSGTKDPVANQASVTELREALMSLAFQREEEGEKVEYRLEEFEIACLSNLNP--EEVEEAVALIPSLHKRFAEDEIEEILGIV 146          
BLAST of mRNA_P-littoralis_Contig634.1.1 vs. uniprot
Match: A0A8J5JCD5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5JCD5_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.010e-19
Identity = 52/120 (43.33%), Postives = 73/120 (60.83%), Query Frame = 1
Query:  298 SCLSNAEVAMILEKQRGNYEEKDINVTPSFAKTMTYVKRFGS--GGAANNSATHELRETLQEFEVFHDGEAIRLHQFEIMQVANLMQADSEVEEVLALIPSMGARLTEEDIDNVLGIVRK 651
            +CLSNAEVA+IL+KQ+ NY E+    T  F KT +YV RF       AN +A  ELR+ LQ     HD E  +L +FEI  ++NL     EVEE +ALIPS+    T+ +I+ +L ++ +
Sbjct:   19 TCLSNAEVAIILDKQKVNYIEQKKMFTSMFKKTQSYVTRFTGTKDPVANQAAVIELRDALQSLSFEHDDEVHQLEEFEIASLSNLYP--EEVEEAVALIPSLPKHFTDHEIEEMLSLISR 136          
BLAST of mRNA_P-littoralis_Contig634.1.1 vs. uniprot
Match: A0A2D4BKN8_PYTIN (DEAD/DEAH box RNA helicase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BKN8_PYTIN)

HSP 1 Score: 97.1 bits (240), Expect = 1.600e-19
Identity = 67/163 (41.10%), Postives = 93/163 (57.06%), Query Frame = 1
Query:  181 LRRSRRTTAARGPVAMEGVDDEENANLLQFGPEHAKEQMSCLSNAEVAMILEKQRGNYEEKDINVTPSFAKTMTYVKRFGS--GGAANNSATHELRETLQE--FEVFHDGEA--IRLHQFEIMQVANLMQADSEVEEVLALIPSMGARLTEEDIDNVLGIVRK 651
            + R  RT    G      V D E+A  L  G +   E  +CLSNAEVA+ILEKQ+ +YE ++  +T  F KT +YV+RF       AN ++  ELRE L    F    DG+   +RL +FEI  ++NL     EVEE +ALIPS+  R  E++I+ +LGIV +
Sbjct:  387 VHRCGRTGRQGGGSRGHHVVDTEDAAELNLGDDFRHE--TCLSNAEVAVILEKQKSDYETQEKQLTGVFQKTYSYVQRFSGTKDPVANQASVTELREALMSLAFPREEDGQKTEVRLEEFEIACLSNLNP--EEVEEAVALIPSLQKRFAEDEIEEILGIVSR 545          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig634.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT81_ECTSI9.300e-8180.79RPOL4c domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A835YSR6_9STRA6.240e-2541.43HRDC-like protein n=1 Tax=Tribonema minus TaxID=30... [more]
A0A3M6VV57_9STRA2.130e-2244.14RPOL4c domain-containing protein n=3 Tax=Peronospo... [more]
H3GHD4_PHYRM5.930e-2243.45RPOL4c domain-containing protein n=23 Tax=Oomycota... [more]
A0A8K1FR52_PYTOL3.260e-2142.07Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024TL56_9STRA5.360e-2140.26RPOL4c domain-containing protein n=7 Tax=Aphanomyc... [more]
F0W0U0_9STRA9.070e-2141.45Uncharacterized protein AlNc14C5G725 n=1 Tax=Albug... [more]
A0A3F2S3S1_9STRA7.720e-2044.06Helicase C-terminal domain-containing protein n=1 ... [more]
A0A8J5JCD5_9STRA1.010e-1943.33Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
A0A2D4BKN8_PYTIN1.600e-1941.10DEAD/DEAH box RNA helicase, putative n=1 Tax=Pythi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig634contigP-littoralis_Contig634:5768..8254 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FT81
Preferred namePOLR2D
PFAMsRNA_pol_Rpb4
Model size679
Max annot lvl2759|Eukaryota
KEGG rclassRC02795
KEGG koko:K03012,ko:K11314
KEGG ReactionR00435,R00441,R00442,R00443
KEGG Pathwayko00230,ko00240,ko01100,ko03020,ko05016,ko05169,map00230,map00240,map01100,map03020,map05016,map05169
KEGG ModuleM00180
Hectar predicted targeting categoryother localisation
GOsGO:0000288,GO:0000375,GO:0000377,GO:0000398,GO:0000428,GO:0000932,GO:0000956,GO:0003674,GO:0003824,GO:0003899,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005665,GO:0005694,GO:0005700,GO:0005705,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006351,GO:0006352,GO:0006354,GO:0006366,GO:0006367,GO:0006368,GO:0006370,GO:0006396,GO:0006397,GO:0006401,GO:0006402,GO:0006403,GO:0006405,GO:0006406,GO:0006417,GO:0006446,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006974,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0008104,GO:0008150,GO:0008152,GO:0008380,GO:0008543,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009266,GO:0009301,GO:0009408,GO:0009452,GO:0009628,GO:0009719,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016071,GO:0016073,GO:0016591,GO:0016604,GO:0016607,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019222,GO:0019438,GO:0019439,GO:0022607,GO:0022613,GO:0022618,GO:0023052,GO:0030880,GO:0031123,GO:0031124,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031369,GO:0031503,GO:0031974,GO:0031981,GO:0031990,GO:0032268,GO:0032270,GO:0032774,GO:0032991,GO:0033036,GO:0033554,GO:0034062,GO:0034248,GO:0034250,GO:0034402,GO:0034605,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0034660,GO:0035770,GO:0036260,GO:0036464,GO:0042221,GO:0042795,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044344,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045184,GO:0045727,GO:0045948,GO:0046483,GO:0046700,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0050896,GO:0051028,GO:0051168,GO:0051169,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051247,GO:0051641,GO:0051649,GO:0051716,GO:0055029,GO:0060147,GO:0060255,GO:0060964,GO:0060966,GO:0060968,GO:0061695,GO:0065003,GO:0065007,GO:0070013,GO:0070727,GO:0070848,GO:0070887,GO:0071166,GO:0071310,GO:0071363,GO:0071426,GO:0071427,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071774,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097659,GO:0097747,GO:0098687,GO:0098781,GO:0140098,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576,GO:1902494,GO:1990234,GO:1990904,GO:2000112
Exons4
Evalue1.53e-81
EggNOG OGsCOG5250@1|root,KOG2351@2759|Eukaryota
Ec32 ortholog descriptionRNA polymerase II, Rpb4
Ec32 orthologEc-06_003770.1
Descriptionrecruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex
Cds size678
COG categoryK
BRITEbr01611,ko00000,ko00001,ko00002,ko03021,ko03036,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791322.077999-CDS-P-littoralis_Contig634:5767..61471680791322.077999-CDS-P-littoralis_Contig634:5767..6147Pylaiella littoralis U1_48CDSP-littoralis_Contig634 5768..6147 +
1680791322.0908163-CDS-P-littoralis_Contig634:7143..72271680791322.0908163-CDS-P-littoralis_Contig634:7143..7227Pylaiella littoralis U1_48CDSP-littoralis_Contig634 7144..7227 +
1680791322.1110125-CDS-P-littoralis_Contig634:7659..77681680791322.1110125-CDS-P-littoralis_Contig634:7659..7768Pylaiella littoralis U1_48CDSP-littoralis_Contig634 7660..7768 +
1680791322.1241941-CDS-P-littoralis_Contig634:8149..82541680791322.1241941-CDS-P-littoralis_Contig634:8149..8254Pylaiella littoralis U1_48CDSP-littoralis_Contig634 8150..8254 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig634.1.1prot_P-littoralis_Contig634.1.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig634 5768..8254 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig634.1.1

>prot_P-littoralis_Contig634.1.1 ID=prot_P-littoralis_Contig634.1.1|Name=mRNA_P-littoralis_Contig634.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=226bp
LPSLGVGCGSTIAHAHLQQSGACPLFVLARLCCDTAVLQLRKIPSCEYRG
IPIEPQTTTLLRRSRRTTAARGPVAMEGVDDEENANLLQFGPEHAKEQMS
CLSNAEVAMILEKQRGNYEEKDINVTPSFAKTMTYVKRFGSGGAANNSAT
HELRETLQEFEVFHDGEAIRLHQFEIMQVANLMQADSEVEEVLALIPSMG
ARLTEEDIDNVLGIVRKHQQSRIYS*
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mRNA from alignment at P-littoralis_Contig634:5768..8254+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig634.1.1 ID=mRNA_P-littoralis_Contig634.1.1|Name=mRNA_P-littoralis_Contig634.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2487bp|location=Sequence derived from alignment at P-littoralis_Contig634:5768..8254+ (Pylaiella littoralis U1_48)
TTGCCCTCTCTTGGTGTGGGGTGTGGATCGACGATCGCACACGCACATCT CCAACAATCAGGTGCGTGCCCTCTGTTTGTTCTCGCCAGACTGTGCTGTG ACACAGCAGTACTCCAGTTACGTAAGATACCTTCCTGTGAGTACAGAGGT ATACCGATTGAACCGCAAACCACAACCCTCCTCCGGCGATCCCGCCGCAC AACAGCAGCCAGAGGACCAGTTGCGATGGAAGGGGTGGACGATGAGGAGA ATGCCAACCTTCTCCAGTTCGGCCCTGAGCATGCCAAAGAGCAAATGTCG TGCCTGTCAAATGCGGAGGTGGCGATGATTCTAGAAAAGCAGAGAGGCAA CTACGAAGAGAAGGACATCAACGTTACGCCGTGAGTACGCTACTCCTGCC TGTACGTTGATCCCACCCTCAAACGGGCAGGACAAGAGTCTATCATAGGG CAAAGGGGGTGAGCGAGACGTGCGAGCTCTTCCCCCCCTTCCTTACTTTC TGTCTGTATTCCCAACGCTTTTGTCATTTAAGCTATGATACCCCTGTGAC GTGTATCACCCATCACCCGTATCTGAGTACAGCAGTAATCACCAGGGGGT GGTATACGGCATCATCCACGGTACGCGTTTGTGTGTGTCTTTTGTCTTTT TACCCCATGTATGAAAAATCATGGAATAATATTTTTATTCTTTATAAAGG CAAGTGAACGCGTCGCCATTTTTTGGCGACGCGTTCACTTGCTTACAGAA TGCGTTTTGAAATTGAGCGGTTAGCGAGGCAAACGTTCAGCTAGTGGCGA ATAACATAATGGCGACCCAAAATGGCGACAGTTAGCGACCTAGGGGTAAG ACGGTTAAGAACGGATTTTTTTTGCCATGAACCAATGCAGAGAAGGCAGT TCTATGATACGCATCATAGCATAGCTGCTCTGAGAGCGAAATTCTATGAA AAACTTGCGCATTGTTCTGAAAAATGAAATTGAACTAATTGAATGCAGAT GTAGGTCCTTAAGGTCTCCGTGGAGATTTTGCCTCCCCTACACGTCGGCC CGACCAGCGTCGGCAAACATTCGTATTCATATTTCTGGGGGGCAAGAGTT TCAGACATTCAGTGGTTCCACACGCCCACGTCAACCACAAGCATATTACA GTTGTCTCGTAGGTGGGCTCTCGGTTGTCATCTCGTGTCTATCCGCTCGG GCACACGACTTGAACACGCGGTACGGAATGTTTTTCATGTTCTCGACATG TCTACAACATCCATTTCGTGTTGTCATTGTGATGGTCGGTGATGAATCAT TGATGCGTTTGTTGGTGTGATTTGTCTTTCTGTCGGTTGTGTTATTTACC TTTGGTGCTATTATTATTTGCTGCAGATCGTTCGCCAAGACCATGACCTA CGTGAAGCGCTTCGGAAGTGGGGGCGCCGCCAACAATTCTGCCACCCATG AGCTGCGAGAGTGAGTACTGCTGTAACGGTGGTGGGGGTCCCGTTGTACG TATGCACGATGCTGCAGACAAGGCGAAATACACCCTGAAGACGCACCGAA CGCTTGTCTCATTATGGGCTTGGGTATAGGTAGATTTGTCACCGTTTCTT TTTTGGGGGGGGGCGATTCGAGGCTGACTGGTTTCGTCGGGTCTTTACCT CCGCACGATAACAGCATCATACAGGAGGGGTGGCGAGGGAGGTGCACACA TGTCGCTTCCGCGATTGTGACCAGCTTTCGCGTGAGTCGTTGTTGTTGTC GCACTTTGTACGCTGCTGTTTTTCGACCCTATCCCGCCCACCCCCAACCC CTCCGATCCTCTCAACAGAGAAAGGAAGTACCTCGCACAAAGCCACACAT AGACTCAGTGCCTGCTCGCGATCGTTCACCTCGTTTCATCAGAACACTTC AGGAGTTCGAGGTATTCCACGATGGGGAGGCGATCAGGCTGCACCAGTTC GAGATCATGCAGGTGGCCAACCTCATGCAGGCGGACAGCGAGGTGGAGGA GGTTCGTCCTTTTTTTTTTTCTTTCGTGTCGGTTCCGTTTGGACAGCCTT CGTTTGGTCTACTTTGTAGGCAAAGTGTTCTTTTCGCGTGTGAAATGATT GTGATCTGATAGGGTGCTTGCTCTCACAGAAATGAACTGATGCAAATATG TTTTTACGGATGTGCCTTGGTTGAGCCCCCTTGTATTGCCCGGTTTTTGG TCCATCCCTGACAACAGCGTACCTGTACCTCTCGCGCCACTTGTATTCGA CCGTTTACCTACTGCATAAATAAAGAACGCATTTGTTTGAGATGGCCTTT TATTTCTCCGCGCGTAGCCCCCCCCCCCTCCCCCCGTTCTGCCTCTCATG CATTCGTTTCGCGTGCCCATACGCATGCGCAGGTACTGGCGCTTATCCCC AGCATGGGTGCAAGACTGACGGAGGAAGACATCGACAATGTACTAGGCAT CGTCAGAAAGCACCAGCAATCCCGCATATATTCCTAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig634:5768..8254+

>mRNA_P-littoralis_Contig634.1.1 ID=mRNA_P-littoralis_Contig634.1.1|Name=mRNA_P-littoralis_Contig634.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=678bp|location=Sequence derived from alignment at P-littoralis_Contig634:5768..8254+ (Pylaiella littoralis U1_48)
TTGCCCTCTCTTGGTGTGGGGTGTGGATCGACGATCGCACACGCACATCT
CCAACAATCAGGTGCGTGCCCTCTGTTTGTTCTCGCCAGACTGTGCTGTG
ACACAGCAGTACTCCAGTTACGTAAGATACCTTCCTGTGAGTACAGAGGT
ATACCGATTGAACCGCAAACCACAACCCTCCTCCGGCGATCCCGCCGCAC
AACAGCAGCCAGAGGACCAGTTGCGATGGAAGGGGTGGACGATGAGGAGA
ATGCCAACCTTCTCCAGTTCGGCCCTGAGCATGCCAAAGAGCAAATGTCG
TGCCTGTCAAATGCGGAGGTGGCGATGATTCTAGAAAAGCAGAGAGGCAA
CTACGAAGAGAAGGACATCAACGTTACGCCATCGTTCGCCAAGACCATGA
CCTACGTGAAGCGCTTCGGAAGTGGGGGCGCCGCCAACAATTCTGCCACC
CATGAGCTGCGAGAAACACTTCAGGAGTTCGAGGTATTCCACGATGGGGA
GGCGATCAGGCTGCACCAGTTCGAGATCATGCAGGTGGCCAACCTCATGC
AGGCGGACAGCGAGGTGGAGGAGGTACTGGCGCTTATCCCCAGCATGGGT
GCAAGACTGACGGAGGAAGACATCGACAATGTACTAGGCATCGTCAGAAA
GCACCAGCAATCCCGCATATATTCCTAG
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