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|
Homology
BLAST of mRNA_P-littoralis_Contig17.191.4 vs. uniprot
Match: D7FJH7_ECTSI (PPR_long domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJH7_ECTSI) HSP 1 Score: 382 bits (981), Expect = 3.110e-116 Identity = 430/658 (65.35%), Postives = 468/658 (71.12%), Query Frame = 3
Query: 492 VSADCRLRRGLRNLGRLRQPQNVLELLAVARGRGETMNLRVFNAAITAVAPCEEGCRYALRLLVLMQEERIAPDRFTLTAIVASCFRCQKWDVAHGVLQTMQRQGMRPLDMRASRLTTAPGDAGEARDRVLRLLRHLRSTE--GEEGVRLASPPSALPEQRTGGPGSGSGGGDDGVSGQGGPRQRDESGTVGKEAVRGKKRMVVTGAREAQLGRSGEVYAQQXXXXXXXXXXXXNGDGGETXXXXXXXXXXXXXLSNDKGRRGSAAEAGE------RHAGXXXXXXXXXXXXXXXKTVEE-----------LMAAGMRPPQEAFLSELKKAANTKSWNRALELLDGLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKMRAAQGVKTNLSSYRAVMHAHCRAGDWASALGLLEDARRDQIKPGTGDLRAMVEACGKAEQHERALSLLEEMRSEGMNLRRTGEKLWWVFDNCRDKQVKDRAWLLMEVEETRERLRLRAERNAQKAEAAEAAAVATA 2408
VSA+CRLRR LR LG LRQPQNVLELLA A+GRG+ ++LRVFNAAITAVAPCEEGC++ALRLL+LMQEERIAPDRFTLTAIVASC RCQKWDVAHGVL+ M+ QGMRPLD+R SRLTTAPG+AGEARDRV RLL LRS + EEG+R PP L R GG D V RQR V + +G K GAR ++ G + G + N K + S E R A V L+ A P ++ FLSELK AANTKSW RAL LLDG+RE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +M +A GV TN+SS+RA M A+CRAGDWASAL LLEDARR Q+KP T DLR MVEACGKAEQHERALSLLEEMRSEGMNLRRTGEKLWWVF+ CRDK+VK+RAW+LMEVE+TRER+RLRAERNAQKA A E+ A A A
Sbjct: 48 VSAECRLRRELRKLGNLRQPQNVLELLAAAKGRGDPLSLRVFNAAITAVAPCEEGCKFALRLLILMQEERIAPDRFTLTAIVASCLRCQKWDVAHGVLEKMELQGMRPLDLRPSRLTTAPGEAGEARDRVRRLLERLRSADLGPEEGLR---PPDQL---RKGGXXXXX---DFTVRDF---RQRRVKSVVRVTSGKGGK-----GARPSENNSRGTF-------RHVGTTAASSPAGSAVLVEVPPKALSSFRMENCKFQSTSCRRFSENILPPLREAYLKETSKNLTSSPTFSNAVASSAADGDDKVGVLLTAETPPGEKFFLSELKAAANTKSWERALNLLDGMREAGYAPHPGAYACAIRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLLLQMCSAPGVSTNMSSFRAAMDAYCRAGDWASALRLLEDARRYQLKPNTADLRTMVEACGKAEQHERALSLLEEMRSEGMNLRRTGEKLWWVFNTCRDKKVKERAWVLMEVEQTRERVRLRAERNAQKAAAEESEAAAAA 681
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D7FJH7 |
| PFAMs | PPR,PPR_2,PPR_3 |
| Model size | 3008 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K17710 |
| Hectar predicted targeting category | chloroplast |
| Exons | 10 |
| Evalue | 1.54e-118 |
| EggNOG OGs | KOG4197@1|root,KOG4197@2759|Eukaryota |
| Ec32 ortholog description | Pentatricopeptide repeat |
| Ec32 ortholog | Ec-04_006170.1 |
| Description | endonuclease activity |
| Cds size | 2358 |
| COG category | S |
| BRITE | ko00000,ko03016,ko03029 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789820.9195094-UTR-P-littoralis_Contig17:779954..780215 | 1680789820.9195094-UTR-P-littoralis_Contig17:779954..780215 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig17 779955..780215 - |
| 1680789820.9328582-UTR-P-littoralis_Contig17:780364..780700 | 1680789820.9328582-UTR-P-littoralis_Contig17:780364..780700 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig17 780365..780700 - |
| 1680789821.0381436-UTR-P-littoralis_Contig17:790596..790649 | 1680789821.0381436-UTR-P-littoralis_Contig17:790596..790649 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig17 790597..790649 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789820.9422235-CDS-P-littoralis_Contig17:780700..780952 | 1680789820.9422235-CDS-P-littoralis_Contig17:780700..780952 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig17 780701..780952 - |
| 1680789820.9572241-CDS-P-littoralis_Contig17:782860..783052 | 1680789820.9572241-CDS-P-littoralis_Contig17:782860..783052 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig17 782861..783052 - |
| 1680789820.9682672-CDS-P-littoralis_Contig17:783583..783715 | 1680789820.9682672-CDS-P-littoralis_Contig17:783583..783715 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig17 783584..783715 - |
| 1680789820.9778342-CDS-P-littoralis_Contig17:784077..784198 | 1680789820.9778342-CDS-P-littoralis_Contig17:784077..784198 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig17 784078..784198 - |
| 1680789820.9886043-CDS-P-littoralis_Contig17:784376..784565 | 1680789820.9886043-CDS-P-littoralis_Contig17:784376..784565 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig17 784377..784565 - |
| 1680789821.0006087-CDS-P-littoralis_Contig17:787035..787825 | 1680789821.0006087-CDS-P-littoralis_Contig17:787035..787825 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig17 787036..787825 - |
| 1680789821.0090125-CDS-P-littoralis_Contig17:788337..788453 | 1680789821.0090125-CDS-P-littoralis_Contig17:788337..788453 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig17 788338..788453 - |
| 1680789821.0202572-CDS-P-littoralis_Contig17:789085..789345 | 1680789821.0202572-CDS-P-littoralis_Contig17:789085..789345 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig17 789086..789345 - |
| 1680789821.029879-CDS-P-littoralis_Contig17:790290..790596 | 1680789821.029879-CDS-P-littoralis_Contig17:790290..790596 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig17 790291..790596 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig17.191.4 >prot_P-littoralis_Contig17.191.4 ID=prot_P-littoralis_Contig17.191.4|Name=mRNA_P-littoralis_Contig17.191.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=786bp
MARGTRRRLTGAVPLTFFALPVADGVLAYDWTTAAPSCALRSGSGRIPTA
SSSSPVLPVQGLSQRRLGESGDRRDGLCSVRSLRRARGGVRSNRSRDGSA
VQMTASDSAVVELSINSLGAGEATRRRQQQQQQQDGDDNDLAGSGRVSAD
CRLRRGLRNLGRLRQPQNVLELLAVARGRGETMNLRVFNAAITAVAPCEE
GCRYALRLLVLMQEERIAPDRFTLTAIVASCFRCQKWDVAHGVLQTMQRQ
GMRPLDMRASRLTTAPGDAGEARDRVLRLLRHLRSTEGEEGVRLASPPSA
LPEQRTGGPGSGSGGGDDGVSGQGGPRQRDESGTVGKEAVRGKKRMVVTG
AREAQLGRSGEVYAQQQQQQQQRRRRLLNGDGGETKTRAGAGAGAGAGLS
NDKGRRGSAAEAGERHAGGGAAAAVVLEAAGGEKTVEELMAAGMRPPQEA
FLSELKKAANTKSWNRALELLDGLREAGFQPLPGAYACAMRACGKAGKWE
HSLALMDEMRSRGVEPGEGCNVMALKACADAGLWEKTLGMLKSMRASGVN
RSESTFVVAMKACGDAGQWEKALALMDDMRRDGMPPMETTYTTAMKACGS
TGEWEQTLKLFYEMQSIGIPPTEQCYTAAIRACAKADKTEKAYSLLLKMR
AAQGVKTNLSSYRAVMHAHCRAGDWASALGLLEDARRDQIKPGTGDLRAM
VEACGKAEQHERALSLLEEMRSEGMNLRRTGEKLWWVFDNCRDKQVKDRA
WLLMEVEETRERLRLRAERNAQKAEAAEAAAVATA* back to topmRNA from alignment at P-littoralis_Contig17:779955..790649- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig17.191.4 ID=mRNA_P-littoralis_Contig17.191.4|Name=mRNA_P-littoralis_Contig17.191.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=10695bp|location=Sequence derived from alignment at P-littoralis_Contig17:779955..790649- (Pylaiella littoralis U1_48)
AGCTGCGCGTGCCCTGGTATGGTTGGTGAAACATAGGCCGCTGGTCCACC
TCCATGGCTCGTGGAACTAGGAGAAGATTAACAGGTGCTGTACCCCTGAC
CTTCTTTGCTTTACCAGTGGCAGATGGGGTTTTGGCATACGATTGGACGA
CTGCCGCTCCTTCATGTGCACTCCGGTCGGGTAGCGGTAGGATCCCTACT
GCAAGTAGCAGTAGTCCAGTGTTACCAGTACAAGGCCTTTCCCAACGAAG
ACTAGGAGAGAGTGGCGACCGAAGAGATGGGCTTTGCTCTGTTCGGAGCC
TGCGGCGTGCGCGAGGAGGCGTGCGAAGCAATAGGAGTCGAGATGGTTCT
GCGGTGCAGGTTTGCATTTACTTGCGTTCCTCGCGAAATGGAGTTGATAT
GCAAACAGGAGCAGATGTGCATATGTGTTTTCAAATCAGCCGGAACGAAG
TTGATTCGAAGCGTTCGAATCCCAACACAGCAACCACACCGGTGCTTCAC
TCCGTTGAGGTGGTCGCGATTCACTTTGCGGGAGCTGCTGCTGCTGCTGC
TGCTACTGGGCACGGTCGTAGATACCGACTGCTGTTGCTCACACGATAGA
TACTAGCGTGCGACTTGCGTTCGAGCCCACTGATGAGGGTACGAGAAGTT
GCTGCTGATGCACTTCACCGCAGTAGTGTATGGGCTGCTTCAACCAACAC
GACCTGAACACCAGTACACAGCAGCGTTGCGGGCTCCATAACGCGGCTGG
TACATGCTTTGCATGTATTTGCAAATGCTGCATCCTGTCCGGCATGGCTA
GGCATTGTTTTATCCTTATCGCTGCTGCTGTACGACTGCGTAGGTGACTT
GTGGTTGCGACTAAGCCACTTTGGGCAAATCGCTCCAGGCAGTGTCGTCA
GATACTTCCATATTAGGCGCTTTCATAGCGGCAACCTATATATGGAGATA
CGAAGTATCATATTGTAGAAGTATCTCATATCTGTCTACTTTGACGCCAC
AAGCTCGGTTGAATGCTGTACTATCTGTACGTATCACGCATGATTAAATC
AGTGACAGGTAGAAGTATCTCGTATCTGTCTACTTTGACGCCACAAGCCC
GGTTGAATGCTGTACTATCTGTACGTAACACGCATGATTAAATCAGTTAC
AGGTATTTTCATATGTAAACCAAAACCAGTCCATTTACCCACCTTCTCTG
CATTTTGAAAAATCTCATCTGTTATCGTTCACTCCACCCCCTCCCCGTCT
CCTATGATGCACGGTCTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTC
TCAGATGACCGCGTCAGACTCAGCAGTTGTTGAACTGTCGATAAATTCGC
TGGGAGCCGGAGAGGCAACGCGGCGGCGGCAGCAGCAGCAGCAGCAGCAA
GATGGCGACGACAACGACTTGGCGGGCAGCGGCAGGGTGTCGGCGGACTG
TCGCCTTCGGCGAGGGCTGAGGAACCTGGGACGACTGCGCCAACCTCAGA
ACGTGCTGGAGCTGCTGGCCGTGGCGAGGGGGCGAGGAGAGACGATGAAT
CTCCGGGTGTTCAAGTGAGAGTGGCTTGTTTACGGAGCGGAGTAAGCACC
TTCTAGTTTCAGACACCAAGCCGCGTCGGAATTTTGGGGGTCGCGTTGCG
GAGCCGTAGGTGGAGCGTGTCGAGTGTTTTGCATTTCATTCATCGCCCCT
CGCAGGTGGGAGCTTCAGCAAGTTTACGTACGTGAACAGAGTCGCGTGTA
TGCGCCACGATACGCTACGGTCTTGTTAGCCGTATGTACGAGGAGGCTTA
AGTGGGGGATACGAGGTCTGGAAAAGGCCGGCCACTGAGTTCCGTAGGCA
ATGATGCACGGAGACACTCTGCCGCGCGTGCACGCGGCATTTGTTGCTCT
TTGCTGACTTTTGTCCTTTTGTCTTCTTTTCGTCCTTCAGCTCTCACCGC
AAGCCTCTGCCGCGATCGTCGCTGTAACTTTCTCGCGTTTCGATCTACAT
ACCTGCGAGTTTTTTCACTGTTTACAGATCTTTGTACCTATTTGTCTCTC
CAAACCCCTCATCACCTCAGATCGGCACTCACTTGCGGTAGCTGATGTCG
AACACATTTTGGTATGCATGTTATTAAACTTGCAAGGTGCAAGATGGTTA
CTGCGCTTCCTCTTGTCATATCTCATTTTTTTCGAAATCCCCGCAGTGCT
GCAATCACCGCGGTTGCTCCGTGCGAGGAAGGGTGCCGGTACGCGCTGAG
ACTCCTGGTTTTGATGCAGGAGGAGAGGATAGCGCCGGACCGCTTTACGC
TTACAGCCATTGGTAAGTGAACTACCCCAGCCCGCCTGCCTGCCTGCCTG
CCTCCCCTGTTGTCCTGTTATCATTTACTGTTCCCGGCTCGTATTTCTCT
GTCCATGCATGGACGGATGTGCCCGAAAACGTAGCGAAAATGTGGCGTAG
TAGTAACCAGCATGGTCCCTCCCATGTCTGCTTCATAAGACGGCATTCAC
GAGTTAACTTGTCCTATCGAATATACTCGGTACTACGCAATTGTGTCGCG
CTCAACCTCCCCCCGCCGTATCCCCGGATACGCTGCGAAGTGAGGACAGC
AGTGGCGAGCTGATTTCCGCTGCCAACAATGTTAAGGTGTGATCGTGACA
AGGCTATTTCTTGTGCAACACCCCCCCCCCCCGCCCCCGCCCACCTCCTT
CATACACGCTATGAAAGGGCGGGTAGTGGCTCAGAGTGATACAACTGAAG
AAGATATACTATCGATTGTTGCAACATATCCCCGACTCTCCCTCTCCCCT
GACTGACCTGTGTATGTTTTTAAGTGGCAAGCTGCTTTCGCTGCCAAAAG
TGGGACGTGGCGCACGGAGTGCTTCAGACGATGCAGCGTCAAGGAATGAG
GCCGCTGGACATGCGCGCCAGCCGGCTCACCACTGCTCCGGGGGACGCCG
GCGAGGCGAGGGACAGAGTGCTGCGCTTGCTCCGACATCTGCGATCGACG
GAAGGAGAAGAGGGCGTTCGATTGGCGTCGCCCCCTTCTGCGTTGCCAGA
ACAGCGCACCGGCGGTCCAGGAAGTGGAAGCGGTGGTGGTGACGATGGTG
TTTCCGGTCAAGGAGGTCCCCGACAAAGGGACGAGAGTGGCACCGTTGGC
AAAGAGGCTGTCCGCGGGAAGAAGAGAATGGTAGTCACCGGTGCTCGAGA
AGCGCAGCTGGGTAGGAGCGGCGAGGTATACGCGCAGCAGCAGCAGCAGC
AGCAGCAACGGCGGCGGCGGCTTCTTAACGGTGACGGAGGGGAGACGAAG
ACGAGGGCGGGTGCAGGCGCAGGTGCAGGTGCTGGTTTGTCGAACGACAA
AGGTAGAAGAGGAAGCGCGGCGGAGGCGGGCGAAAGACACGCAGGAGGAG
GAGCCGCAGCTGCAGTCGTGCTTGAGGCAGCAGGCGGCGAGAAAACCGTG
GAAGAGTTGATGGCGGCGGGGATGCGCCCACCACAAGAGGCGTTCTTATC
CGAGCTGAAAAAGGCCGCCAACACCAAGAGCTGGAACCGCGCCCTCGAGC
TCCTGGACGGTTTGCGCGAGGCCGGCTTCCAGCCGCTTCCGGGAGCATAT
GCCTGTGCGATGAGGTATTTATCTAGACAGAGAGAGAGAGGACGGACGGG
CTATAACGCATAATGCATGTCTACAGCATGGGCACCCTGAGTTCGGGGGT
TTGGGGGAGGGGAGAGTGTGACTACGACAGTGGCCGTCCTTGTTTGCAAA
CTGCTTTCGTCCTACTGTACCCAGAAGTGGGTAGTACCGCATTGTCAAAG
GCGTGCGGGTCGTGCCGCGTGCTTTTCCCTCAGCGTTTTTTCTTAGTTTT
TAGGGTAGCGCGACGTCTTTGTGACGCAGTTTGTCTTATAACGCACAAAG
ACGGGCTGGACATGACGCCAATGTGATATGATGTGCATTGATGTGCGAAG
GCGTGAAGCATAACGAAGTGTGGTCTGATGCCATCGCACACAGAGCGACT
TAAATAAACAGAACAACAGAGAGCGGTGGGCGTAACGCAAACGTCATGCC
CAAGCAATCATCGCCGTTTGATTAATCAACTCTAGTTTGATTATTTGTCT
ATTGTTGTTTATTTTAGGAGCAAAAAAGTAGAGGCGTTTGCAGTGTGGAA
CGGCTTAAAATTTGCCTGCGGCGCGGCGCAATCATACGCGAAACGACTGA
CGATGCGTAACGCGGCGCACGCACACGCGCGCGACAATGCTACACACTAC
ACAGCACACAACACACAGCGCAGCGTTATTTATACTTCGAAGTAATCAGC
TCTATACCAATCCCAATGTGTTGTTACATCAGATCTGTACTACTTTATTA
AGCTTGTAAAACCTTCTTCATAACTTTATCCCTGAAGATACCACTACTAC
TTCTTGATACATAATATACTGCTGTATACTCCTGTCTGTGTAGGCCATAA
TTAATTGTTGTTCACTAGATAGAACTACGGTACAGCAGCAAGCAGTAGAC
TGACGGCGTGCTGTGCGTACTTCGTCCATCGTACCGTGTGTACGAAGTTC
CGCACTCTCTACACTCTGTATAATTGCAGACCATTTATTATCCTGTATTC
TGTCGGCGGCTCTTACTGCTTTATTATGTGATGTACTTCGAAGTATGTGT
TATCGCAACTAACTCTCGATCTACACTACTAGTACTATCTATTCCACCTG
CTCTGTAGACCACATAAAACACCCGGAGATGCATGGGAAATAATGCACTT
CGTAGCTTTCCTTTATAATTTTTGCTCAACACTAAATTTCATTTACTACT
GTAGTTTGATTAATCACCTAATCTACCCCTCCCTGTCAACTAATCAACCC
CTGTCGACTATAATCACAATAATCAATCAAATACAAAATCGCCGTTTTAT
ATCCGGAATAATTAATAATCAAATCAAACCCGTATTCAGGTCGATTCACA
ACTAACTACTCTAAATATTGTAGAAGGACGGACGTAGTCGAAACGAAAGA
TGTCGGGCCGCATGTCAGACCACATCTATCTCATGAATTCATGCCAAAAG
AGCGTGTTTTACGGCAGAGAATAGCCAGATTATGATTCTTGGACCCCGGG
ATCATTATCATAGCTTCATTTTGATCCCACTTGCGTGTCACATGCTTCGG
TGCTGGCTGAGAAAAGGCCAAAATGCTCCATGCGGCGCAATTACATCTTC
TATGTACGACGCAGTCTTTTCTCTTCGTTCTCTCTCTGTTAGTTGTTGTC
GACACGTAAGAAAGCGTTGTTTGGCGACGAATGACTTGCGTCTGCAAATT
CGGCGCAGTCTTTTCTCTCGCTCTCTCTATGTTGTCGAAACGTAAGGGCG
CATTTGGCTAACGGCAAGCGTCTGCATGCAAACCCACGAACACATATCAA
ATACCCCCTGCAGCACTGAGTATACCAATGCATCGCGTCCAGACTGTCAC
GGGTCTTTTGAGCCCAAAAATCATTATCATATCGCTTCATTAGCGTATCG
CTTCATTTTATCCCGCTTCCGCGTCACGTGCTTCGATGCTGGCTGAGAGT
AAAGAAAGCCCAAAATGCTACGAAGTACATGCGGCGCAACTACATCTGTG
TAAGAGTCAATATTTTCTCTCGTTCTCTCTCTGTGGTCGAAGCGAAAGAA
AGCGTTTGGCGAACGACCAGCGTCTGCAAACAACTCGGCCAAGGAAGCAC
CAACTGAGCTAAAACTTTCTGGAGGCCTCTGAGATCGTCTTAGACGTGCA
ATGAGCTCGCTAGTTGTGTCGCACTTGATCGGCTCCAATTTTTCCAATTT
TTTCCTGGTTTGGAGCGTCCGTCTGAGACCGACATACATACATAGAAATG
TTTTACCGTTCCGTAAGTACCCCTCAGTGAACACTGAGGGAACTTGTGAG
AGCACGTCATATGTATGTACAGCAGTATGTGCACCACGGCCAAGCGTGGC
GACGAAAAACGAATGTCGTGAATGTAAGTAGATACCGCTGTGGTATGCTG
TTCATGATTTACCGGGGGGACCGACACAACCGTACCCTACGCCGCCGTCG
ACCCGTTCACTGCTGCTGTATAACCGCCGGCCAGGGCGTGTGGGAAAGCC
GGGAAGTGGGAGCACTCTCTGGCCCTCATGGACGAGATGCGGTCGCGCGG
CGTAGAGCCCGGCGAGGGCTGCAACGTCATGGCGCTCAAGGCGTGCGCGG
ACGCGGGCCTGTGGGAAAAGACTCTCGGCATGCTGAAGAGTATGAGGGCT
TCGGGCGTGAACCGTTCGGAGAGGTGAGCGTGTGTGTCTGCGTCTCTGGT
GTGTGTCTTGTGGCTGTGCCTGTGTAGCCATCGTGGTGTGCTTCGGCAAC
ACACCACAGCTCTGTGTGTGCAACGATACCAATACGCTTTTCTCCTCGAA
CAAACAACGAACCGATTAATTTTGTGTCGACTTTTGCCTCTCTCTACGCA
GTACGTTCGTGGTGGCGATGAAGGCTTGCGGCGATGCCGGTCAGTGGGAG
AAGGCGTTGGCCCTGATGGACGACATGCGCAGGGATGGAATGCCACCGAT
GGAGACGACCTACACCACCGCGGTGAGGACGAGAGAAACTGTCATCACAG
CAGTAAGCGGGCACAAAGTTTGAAGGGGAGGGGGGGGGTTGGGGGGGGGG
GGAAGATCATTTTTTGTGTGAAGATTTATGGCACTTTAATATTCGCCTCT
CCGGCCGTACGCGTGCGGGCCTTTATCTAACCACTTTCCCTAACAAAAAA
CGCCGTCGTAGAAGAACCAGACTATCCATGCCAAGACGAAGCCCAAGAAG
CGGGGGGCTTTTTTGTTTTGACGTCCTTTCATACCGCAGCGCTGCAGAAA
GGGTTGGTTTCCGCTGATGCCAGCCCGCCGTCGACGAAACAAACCAAACA
TTTCTCGTTGTTTTATTTTCGCGTACGAACACAGATGAAGGCGTGCGGAA
GCACCGGCGAATGGGAGCAGACGTTGAAGCTGTTCTACGAGATGCAGAGC
ATCGGCATACCGCCGACCGAGCAGTGCTACACCGCCGCCATCAGGGCGTG
CGCAAAGGCCGACAAGGTGAAGATGATCCACGACCTGCCCCCGCCCACCC
CGCTCACCCCATTGCCTCGCCCTCCTACTTTGAAATCACTAGATTGTACA
GTTCTAGCAATTCAACTGGTGTCGTGATTCAATATGCTTGAAAAGAATGC
GCACACGCGCACACAACGGCTGGTTCCTCTCTCTTACCGCATAGAATTGT
AATTTGAAGCACCCGGCCTGCATCGCATCGGTGAAGGCACAGCTACTACT
TCGGTTGTACGCTTATTCAACCTTCCTCCTTTCTTTGAACATAAACAACG
GCGGGGCAACAGAAGGCCGGCCAGCCGATCGGTCCCTCGCGTCCTGTCTC
TCTATTCCTCTTTCTCCCTCCCTAAAAAATATGGAATATATGACAGCAGT
ATTTCCAGCGTGCAAGCGGTTTCCGAAAGTGCTCTCAGCAGCAACCCCTT
CGCCTTTCTCGTTTTCTTGCTCTTTGCTGCTGATCTCGTCCCTGTGCCCC
CCCCCCCGCTGCCGCCGCCGCCGCCGCCGCCCGCCCCTGCATGAAAGACG
GAGAAGGCGTATTCGCTGCTGCTCAAAATGCGCGCAGCGCAGGGCGTCAA
GACGAACCTGTCGAGCTACCGGGCGGTGATGCACGCCCACTGCAGGGCGG
GGGACTGGGCGTCGGCGCTGGGACTTCTGGAAGACGCTCGAAGAGACCAG
ATTAAGCCAGGCACCGGAGATCTCCGCGCCATGGTGGAGGTGCGTTGCAG
CCGCGGTGCATGGGAAGATATTTGTTGCTTAGTCCAAAGCAAGGGTCGGG
GACGAGAGAGGGTAGGGGCTTGAGTGAAACCAACGTACTGCTATTTTATG
TCTTTTAGTACGCTGATGAGGGAAGACGCGTACCAGGTGGCAAGAGTATA
CGATCGAAGTATGTATGGGCTTGAATCAAGGCAGGAAAATAAAAGGAAAA
TAAACAAACGAAGGTAGTGGGAACTTTTCCCTAAGGGGCGTTTCAATGAA
CTTTGATGTCAAAATAAGTGTCACAAAGTTTGTCACTTTACATGACACTC
GTTTCGTCCGTTTTAAACAGGCGGCGCAGACCTCAACATTTTTGCCTCCT
TTTCTGGTATTGTTTCGCCGCCTGTCCGTGTGGGCCATTTGCTTCATTTG
CTCACCGAGACGTCACTTCCACACATCTGATGATATCTCGCCCAAAAAGG
GAGGAGACTCGGTGCCGAGTTCACCCCTAGAGAGGTGGGCTCCTTGGCCG
TCTGAATGGTCAAGGTTTGAGGCCGTTGGATGCCGTACGCAGCGAGGAAA
GAGATGCCAAGTACCCCGTGCCCCGGTTCCACTGCTGTGGAGAGCACATT
TGTTGACTTTTCGACCCCTTTTTTAGAGAAGCACAACAATCATCTTTTGC
ACTTAATGCTCGCCGAACAAAAGACGAGACTCTCTGAAAACTGCAGGGCG
GGCGATATATGCCTATCCTCTGTCAGGCTTGACCAAGGTTCGGGGCTGTG
GGGCGCCAGGGTTAACGGGAAAACAAGTTTTGGGATCTCGTATCAAGCAG
ACTTTTCAGTCATGCCCCTGAAAAAATGAACAAAAAATCTACTCTCCGTC
ACTACAGCTGGCTGCTGCTGGTGTCGAGAATTTAGGGACGAAGCCGGGAG
AAACATGGCTTTCTGCTGTCGGTCGTGGCTCAGCCACACCTGTACTATCT
CTCGGAGTTAGCTACCACTGCTGGACCCTCTGCCAGGAGCGTCTCGGCCT
CGCTTGGGGATGTCGAAGAAAATCTTAAAGAAAGTGTCAAAAAGTGTGAG
CCAAGTCGCTCACACTTTTGGGCTGCAGATCAGATCACACTTTTTGAATA
AAAAGTCGACAAATGCCTTCATACATGTGTTGAATGTTTGACATGTCGAA
ATATTTGACATGAAAAGTCAAATGATTAAAACGACCCTAAGACAGCGAGC
CAGGTCTGCCAAGACATGATGATTTCAGAGCTGTACTTGAACTGGCGGGC
GTTTAAACTCAACAGACGCCGGCTCGGCATCTAAGAAAAAAACGCGTCTG
GGGGGAGGAGGGGGGGTTATGTTTTTGTCTCACCTGGTTTCCTGCGTCTT
CTTAATACTGCTGTAGAAATATCTCCCGGTTGTGTACTGAACGCAAAAGT
TACCACCCGCGAACGACGTTTCATAGCGCAGCACTTTTCGCTCCACCGAC
TAGCACGATATTATGCTTTCGTGCCCCAAACGGGCACACACATTTTCCTG
CTGGAACTCGTCTAGACAGAATTGAATCGCAGGATGTGCAAATAGTTCCG
TTTCTTTTTGTTTTGTTTTGTCCCACCCAGAGTGCACAGGCTACCGCTTC
AGTACAAAAACCGGGTTGTTTGTTGCTCACTTTGGTATCCAGGTGCGTGT
GTGCGGAAAGAACGGCGGGCTGGCCACCGCGGCTTCGTGAACAGGATTGC
TGTATTTTTATCGCTCGGCGGACCCCCCCCGCGCGCGCGCGCCCCCGCCC
ATCACCTGCGGCTGGTTCATTTGGCATGACTGTCACTTCTGAACAACGAT
GGGCTTCACACAACTGTGCGACTTTTTTTCTTTCGTTTTCGTTTTTTCGT
TTTTTCGTCATTTCGTTTTTGTTTTGTTTTTATGTTGTCGCATCCAGGCG
TGCGGAAAAGCCGAACAGCACGAGCGGGCCTTGTCTTTGCTGGAAGAGAT
GCGTTCCGAGGGCATGAACCTGCGAAGAACGGGGGAAAAACTGTGGTGGG
TGTTTGACAACTGCCGAGACAAGCAGGTCAAGGACAGGGCGTGGCTGCTC
ATGGAGGTGGAGGAGACTCGCGAGCGTTTGAGGCTGAGAGCCGAGCGCAA
CGCCCAAAAGGCAGAAGCAGCAGAAGCAGCAGCAGTAGCGACAGCGTAGT
AGGTTGTATCAGGTGGCACCGTCGCTGCTTGCTGCCGTTTTGAGCTTTTT
TACCGCTCCCAGTGCTCTGCCAGTACCATGAACATACACGTGTTTATTTT
TTCCGTGCACTGGAGCACACACCTGGAAGCCGGCCGAGCTGATGGTTGTG
CTGGCCATTCGTGCCGTTTTGAGGGTGGCCTGTCAACCGATTTTTGAATT
TGCTGATTTTGAAAGACATCGAAGGAGCACTAGATTTTCACACGCTGGGT
ACCTCACACCCCAGCACCAAGGCATTCGGCAATAAATAATCCTTTGGCTG
TCGCACACAGGGGCGGCCGGGGCTTTTCTTTACCTGCATATCACGCAGTC
TACCCCCAATCTCCTTCTCAAATGTCAGAATAATTTTCTCACTCTTCTTG
AATCAAGTCGAAACCGTACTCGGACAAGGCTGAAGTGAGTTATGTCGTGC
AAGGAGTCCCGACCTGAGACGCGATTTTCAGCAGAGGACATTCTGCGGCA
GCGACGTGTGTATTGGGACATTTGACGTGGAACATTCAGATCTGCTGCTG
GGGATGACATACCTCAGCCGTTGCTCAAAAAGTCCGCCAACTGGACAGAC
ATCAAACGTCTTCCACTGCTGTGCTCGCGGCCACAGACCCCACCCTCTTA
AACTGCGGATCTACAGCAGCAGCTCATGCCACTAGCTGCCTCGGATGGCC
CGCTGTTCAGAAGATTGGTGCCCGTGGCGATGGGTACAGCCGCAT back to topCoding sequence (CDS) from alignment at P-littoralis_Contig17:779955..790649- >mRNA_P-littoralis_Contig17.191.4 ID=mRNA_P-littoralis_Contig17.191.4|Name=mRNA_P-littoralis_Contig17.191.4|organism=Pylaiella littoralis U1_48|type=CDS|length=2358bp|location=Sequence derived from alignment at P-littoralis_Contig17:779955..790649- (Pylaiella littoralis U1_48)
ATGGCTCGTGGAACTAGGAGAAGATTAACAGGTGCTGTACCCCTGACCTT
CTTTGCTTTACCAGTGGCAGATGGGGTTTTGGCATACGATTGGACGACTG
CCGCTCCTTCATGTGCACTCCGGTCGGGTAGCGGTAGGATCCCTACTGCA
AGTAGCAGTAGTCCAGTGTTACCAGTACAAGGCCTTTCCCAACGAAGACT
AGGAGAGAGTGGCGACCGAAGAGATGGGCTTTGCTCTGTTCGGAGCCTGC
GGCGTGCGCGAGGAGGCGTGCGAAGCAATAGGAGTCGAGATGGTTCTGCG
GTGCAGATGACCGCGTCAGACTCAGCAGTTGTTGAACTGTCGATAAATTC
GCTGGGAGCCGGAGAGGCAACGCGGCGGCGGCAGCAGCAGCAGCAGCAGC
AAGATGGCGACGACAACGACTTGGCGGGCAGCGGCAGGGTGTCGGCGGAC
TGTCGCCTTCGGCGAGGGCTGAGGAACCTGGGACGACTGCGCCAACCTCA
GAACGTGCTGGAGCTGCTGGCCGTGGCGAGGGGGCGAGGAGAGACGATGA
ATCTCCGGGTGTTCAATGCTGCAATCACCGCGGTTGCTCCGTGCGAGGAA
GGGTGCCGGTACGCGCTGAGACTCCTGGTTTTGATGCAGGAGGAGAGGAT
AGCGCCGGACCGCTTTACGCTTACAGCCATTGTGGCAAGCTGCTTTCGCT
GCCAAAAGTGGGACGTGGCGCACGGAGTGCTTCAGACGATGCAGCGTCAA
GGAATGAGGCCGCTGGACATGCGCGCCAGCCGGCTCACCACTGCTCCGGG
GGACGCCGGCGAGGCGAGGGACAGAGTGCTGCGCTTGCTCCGACATCTGC
GATCGACGGAAGGAGAAGAGGGCGTTCGATTGGCGTCGCCCCCTTCTGCG
TTGCCAGAACAGCGCACCGGCGGTCCAGGAAGTGGAAGCGGTGGTGGTGA
CGATGGTGTTTCCGGTCAAGGAGGTCCCCGACAAAGGGACGAGAGTGGCA
CCGTTGGCAAAGAGGCTGTCCGCGGGAAGAAGAGAATGGTAGTCACCGGT
GCTCGAGAAGCGCAGCTGGGTAGGAGCGGCGAGGTATACGCGCAGCAGCA
GCAGCAGCAGCAGCAACGGCGGCGGCGGCTTCTTAACGGTGACGGAGGGG
AGACGAAGACGAGGGCGGGTGCAGGCGCAGGTGCAGGTGCTGGTTTGTCG
AACGACAAAGGTAGAAGAGGAAGCGCGGCGGAGGCGGGCGAAAGACACGC
AGGAGGAGGAGCCGCAGCTGCAGTCGTGCTTGAGGCAGCAGGCGGCGAGA
AAACCGTGGAAGAGTTGATGGCGGCGGGGATGCGCCCACCACAAGAGGCG
TTCTTATCCGAGCTGAAAAAGGCCGCCAACACCAAGAGCTGGAACCGCGC
CCTCGAGCTCCTGGACGGTTTGCGCGAGGCCGGCTTCCAGCCGCTTCCGG
GAGCATATGCCTGTGCGATGAGGGCGTGTGGGAAAGCCGGGAAGTGGGAG
CACTCTCTGGCCCTCATGGACGAGATGCGGTCGCGCGGCGTAGAGCCCGG
CGAGGGCTGCAACGTCATGGCGCTCAAGGCGTGCGCGGACGCGGGCCTGT
GGGAAAAGACTCTCGGCATGCTGAAGAGTATGAGGGCTTCGGGCGTGAAC
CGTTCGGAGAGTACGTTCGTGGTGGCGATGAAGGCTTGCGGCGATGCCGG
TCAGTGGGAGAAGGCGTTGGCCCTGATGGACGACATGCGCAGGGATGGAA
TGCCACCGATGGAGACGACCTACACCACCGCGATGAAGGCGTGCGGAAGC
ACCGGCGAATGGGAGCAGACGTTGAAGCTGTTCTACGAGATGCAGAGCAT
CGGCATACCGCCGACCGAGCAGTGCTACACCGCCGCCATCAGGGCGTGCG
CAAAGGCCGACAAGACGGAGAAGGCGTATTCGCTGCTGCTCAAAATGCGC
GCAGCGCAGGGCGTCAAGACGAACCTGTCGAGCTACCGGGCGGTGATGCA
CGCCCACTGCAGGGCGGGGGACTGGGCGTCGGCGCTGGGACTTCTGGAAG
ACGCTCGAAGAGACCAGATTAAGCCAGGCACCGGAGATCTCCGCGCCATG
GTGGAGGCGTGCGGAAAAGCCGAACAGCACGAGCGGGCCTTGTCTTTGCT
GGAAGAGATGCGTTCCGAGGGCATGAACCTGCGAAGAACGGGGGAAAAAC
TGTGGTGGGTGTTTGACAACTGCCGAGACAAGCAGGTCAAGGACAGGGCG
TGGCTGCTCATGGAGGTGGAGGAGACTCGCGAGCGTTTGAGGCTGAGAGC
CGAGCGCAACGCCCAAAAGGCAGAAGCAGCAGAAGCAGCAGCAGTAGCGA
CAGCGTAG back to top
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