mRNA_P-littoralis_Contig166.96.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig166.96.3
Unique Name	mRNA_P-littoralis_Contig166.96.3
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig166.96.3 vs. uniprot
Match: D8LSK7_ECTSI (Non-structural maintenance of chromosomes element 1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK7_ECTSI)

HSP 1 Score: 295 bits (754), Expect = 4.590e-95
Identity = 146/189 (77.25%), Postives = 166/189 (87.83%), Query Frame = 1

Query:  229 LKEPLQAFAQILMARKVMSHEDAQKALTASYERFGELGFDLEAALSKVDKMLSVMDMAVRSLKASGPDGALYHCFVNKNADEIAKLHGSKLEDWQVQAFRSMLEKFGKSEDEQLVLMDLNELSVHIKTSTVTESGKKEMVKLFADQLVEDFWLSRPGNDVHYRLGVRTYVELPELLKTFDLEVPQVIHH 795
            L+EPLQAFAQILMARKVMS ++AQKAL  SY+RFGEL F L+ A+SKVDKMLS MDM VRS+KASGP+G +YHCF+NK ADEIAKLHGSKLEDWQV+AFR M+EKF KSE++QL L+DL  L+ HIKT    ES K+EM+K FADQLV+DFWL+RPGNDV YRLGVRTYVELPELLKTFDLEVPQVIHH
Sbjct:    4 LREPLQAFAQILMARKVMSQDEAQKALDVSYQRFGELAFTLDEAISKVDKMLSSMDMGVRSMKASGPNGLIYHCFINKTADEIAKLHGSKLEDWQVKAFRGMIEKFAKSEEQQLELLDLQGLTEHIKTKEA-ESTKREMIKSFADQLVDDFWLTRPGNDVFYRLGVRTYVELPELLKTFDLEVPQVIHH 191

[Close]

BLAST of mRNA_P-littoralis_Contig166.96.3 vs. uniprot
Match: W7TNJ7_9STRA (Non-structural maintenance of chromosomes element 1 homolog n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNJ7_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.520e-14
Identity = 52/188 (27.66%), Postives = 101/188 (53.72%), Query Frame = 1

Query:  235 EPLQAFAQILMARKVMSHEDAQKALTASYERFG-ELGFDLEAALSKVDKMLSVMDMAVRSLKASGPDGALYHCFVNKNADEIAKLHGSKLEDWQVQAFRSMLEKFGKSEDEQLVLMDLNELSVHIKTSTVTESGKKEMVKLFADQLVEDFWLSRPGNDVHYRLGVRTYVELPELLKTFDLEVPQVIHH 795
            E  QAF Q+LM+RKVM+H  A  AL    E    +   D+++ L+ ++K L   ++ +R +     +    +  VN  +D+++K+H SK++DW+   F+ +++         +   +L  L V I  +  +   K+ ++ L    L  +FWL R  +   + LG RT++EL + ++  ++E+PQV+++
Sbjct:   14 EARQAFLQLLMSRKVMTHSQAANALAMISEELNVQDQLDVKSCLANLNKELQNCNLQIRGMVHQDSEA---YAVVNVLSDDVSKMHASKMKDWEKAYFKEVIKAICGRGGNFVEDDELTALRVPIGGTAASVREKRSVLSL----LSAEFWLQRDKHG-RFALGPRTFLELDDFVRAHEMEMPQVLYY 193

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig166.96.3 vs. uniprot

BLAST of mRNA_P-littoralis_Contig166.96.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LSK7_ECTSI	4.590e-95	77.25	Non-structural maintenance of chromosomes element ...	[more]
W7TNJ7_9STRA	1.520e-14	27.66	Non-structural maintenance of chromosomes element ...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig166	contig	P-littoralis_Contig166:428404..443664 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	2880.D8LSK7
PFAMs	SMC_Nse1
Model size	1473
Max annot lvl	2759\|Eukaryota
Hectar predicted targeting category	other localisation
Exons	8
Evalue	1.19e-100
EggNOG OGs	2EYQU@1\|root,2T06J@2759\|Eukaryota
Ec32 ortholog description	Non-structural maintenance of chromosomes element 1
Ec32 ortholog	Ec-09_001990.1
Description	Nse1 non-SMC component of SMC5-6 complex
Cds size	585
COG category	S

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig166.96.3	prot_P-littoralis_Contig166.96.3	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig166 428617..442989 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789804.8825252-UTR-P-littoralis_Contig166:428403..428616	1680789804.8825252-UTR-P-littoralis_Contig166:428403..428616	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig166 428404..428616 +
1680789804.9984548-UTR-P-littoralis_Contig166:442989..443664	1680789804.9984548-UTR-P-littoralis_Contig166:442989..443664	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig166 442990..443664 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789804.8952284-CDS-P-littoralis_Contig166:428616..428670	1680789804.8952284-CDS-P-littoralis_Contig166:428616..428670	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig166 428617..428670 +
1680789804.9120963-CDS-P-littoralis_Contig166:437418..437547	1680789804.9120963-CDS-P-littoralis_Contig166:437418..437547	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig166 437419..437547 +
1680789804.9243789-CDS-P-littoralis_Contig166:438699..438765	1680789804.9243789-CDS-P-littoralis_Contig166:438699..438765	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig166 438700..438765 +
1680789804.934881-CDS-P-littoralis_Contig166:439065..439157	1680789804.934881-CDS-P-littoralis_Contig166:439065..439157	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig166 439066..439157 +
1680789804.9462295-CDS-P-littoralis_Contig166:440150..440238	1680789804.9462295-CDS-P-littoralis_Contig166:440150..440238	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig166 440151..440238 +
1680789804.958909-CDS-P-littoralis_Contig166:441611..441659	1680789804.958909-CDS-P-littoralis_Contig166:441611..441659	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig166 441612..441659 +
1680789804.9727662-CDS-P-littoralis_Contig166:442124..442217	1680789804.9727662-CDS-P-littoralis_Contig166:442124..442217	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig166 442125..442217 +
1680789804.9864674-CDS-P-littoralis_Contig166:442974..442989	1680789804.9864674-CDS-P-littoralis_Contig166:442974..442989	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig166 442975..442989 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig166:428404..443664+
coding sequence from alignment at P-littoralis_Contig166:428404..443664+

protein sequence of mRNA_P-littoralis_Contig166.96.3

>prot_P-littoralis_Contig166.96.3 ID=prot_P-littoralis_Contig166.96.3|Name=mRNA_P-littoralis_Contig166.96.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=195bp
MTAHVLKEPLQAFAQILMARKVMSHEDAQKALTASYERFGELGFDLEAAL
SKVDKMLSVMDMAVRSLKASGPDGALYHCFVNKNADEIAKLHGSKLEDWQ
VQAFRSMLEKFGKSEDEQLVLMDLNELSVHIKTSTVTESGKKEMVKLFAD
QLVEDFWLSRPGNDVHYRLGVRTYVELPELLKTFDLEVPQVIHH*

mRNA from alignment at P-littoralis_Contig166:428404..443664+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig166.96.3 ID=mRNA_P-littoralis_Contig166.96.3|Name=mRNA_P-littoralis_Contig166.96.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=15261bp|location=Sequence derived from alignment at P-littoralis_Contig166:428404..443664+ (Pylaiella littoralis U1_48)
GAGCAGGCAACAGCTAGAGCGTCGTCGGACAACGGAAGGAGGGAGAGGAA
TTGAAAATCTTCTGTAGACTGAGTACGTCTGCCGTGTGTCCTGTGTGTCG
TACCTTCCAGCTCGTGTAGACTGTTGTCTCCCTATTTTCTCCAGCTGGTC
GTTCAAGGGCACAGCGGCAGGAGCAGCTCCAATTCTCCGAGTCAAGCAGC
CAGTGTGGAGACGATGACGGCACACGTACTGAAAGAGCCCTTGCAAGCCT
TCGCTCAAATCCTTATGGTGAGTGTTCTAGCGCTTGGCAGACGTGTGGTC
ATCCACTTTTTTGGTGCAGCAGCAGTAGCGAAGAGGAGGCAAGTGCTCAC
TCACTGCTGTCTGCGAGCGTACCACCCCCCCCCGTGTTACGCTCCGTACA
CAGAATCGTATGATATGATGTGATATCGACAGAGAGCAGTTCAGTTTTCA
CAGTGAAGCTTCACCGCCCTTTCACAGCACAAAATTTTTCATGTACAAGT
AGTAGCGACGGCTCAGATGGACGAATATCCGCTGCAAAGGCGCATGGAGT
CGAAGGTCAGTTTTGTTGTTCTTATTGGTAGGTCACCAGCAGCAAATGGA
GGTGTATTGAGGCAGGTAGACTGATCTTCGCATAGCAGAAGTATGTCGTA
GCCTGGAGCCAAAGCACAGCACAGCACAGAGGAGGTGTCTGCCGTGGCTC
CTGTCATTTGATATCATCCTCTACAACACCAATTGTGTAGACCGTTTTCT
ACATCTATCCGTGAGTCAAAAAGGGGACCTGCGTGCAGCAGTCGAAGATA
ACAAGTCACCCATAGAACCGGCCGGCCGGCCGTTCCTCCCTTATACCATT
GTCAACTGGCATTATATGGATTTTAGCACCCCCCACTTGTTTTCCAAGCA
AAGGTCCCGACGGCAGGACTTGGGTGCAAGTGTGTCCAAGACAGGTGGCC
TTGTGGAGTTTCAAGCTTCCCGAAACATTCGTGTTGTTCTTTGAGAAATC
AAGCTCGCAAAGAACTCCGGAGCATCTAGTGTTTGCCACTGCTGTGGACA
ATACTGATGGATAATCCGTACGGGGTGGAGCTGGGCCGAATCCGGCCGGG
ATATGTTTTGGGCAATGTGTACCCTGAGTGTGTGACTCGATGTTACTTCG
CTGTGTGAGCGGGATGCTTCGCTGTGTGAGCGGGATGCTTCGCTGTGTGA
ACGGGAAAAACGTGATTGATTATTGATGCGTCGCCCAAAAGAAAGGGGGT
ACACATAAATACTCCATGATACTCCCATGGTACCCTCATTCCACAAAATT
CTCAAACGTACCCTGTACCATACTCAACCAAATGTCCGTTTCTCTCAATC
AATTCGAAATAATCGCATACTGCTGCGAGTACATCCAACATCCCCCCTGC
TCGCAAAGGCGTGCTGATTATTGCTGTAGCCGATAACGATAACACTACCT
GGTACCTAAAGCCTCGACGAAAATATAATAACTTGAGAACTAAGCGATAT
CGACCGAGAACACCGGGGCCCGTTGGTAGGTAAAATCCTCAAGAAAAACC
TCCCCCTCAAGTGTTCTCACTGCTGTCGATCAGCCCGAAATTATATTTTT
GGCTCAGATACTTCCTCCGCATACTAAAACACCAGCATGCTCAAACTCCT
CAGGTAATCAATAAACGCTCAACACTGCAAACTCAATTTAAATCAAATCA
AAATACTTCAAATGGATTCACACTCAAAATACTCTAAAATGACAATCGCC
CGTCTGTTATTTTTCATACTGTATCCAAGTCAGAAAATCAGAAAATCAAC
TCCAATACCCAACACTTCACGATACCTGGAATCATATATAAAACCAAAAA
CCAAAAACCAAAATCATAAATCTTATTCCAGGTTCATCACAAAATCACGG
TGAAATTCAAATGCCTCCTTCGGCAACACCTTGGTGAGAAAGTCTGCACG
CTGGAAAGCCGAAGTCACGTGGATCACCGAAATCTCCTTCCTCTCTACAA
GCTCCCTCAGAAAGTGGTGCCTCACATCGATGTGTTTCGAGTTCGAGTTC
GAAATGGGGTTGTTCGCAAGTTGGATCGTTCCCTCGTTGTCCTCAAACAC
TGGAATACATGGCATCCCTGCTTTTGGCAACATAAAGCGCCAAACCTGCC
TCAAAAACAGAATCTCCTTCACGACGTCGCCAAGCGCGACGTACTCTGCC
TCTGTTGTCGAAAGCGTAACGCACTTCTGCGTCCTAGAAAACCACATCAC
AACTCCTCCTACACACATGATCACTCCCCCGGAAACCGATCTACGGTCTG
TCGCCTTGCTTGCAAAATCGGCATCTGCATACACTACAAAACTAAAACCC
TCTACTGTCCCCCTCTGAAACGAAATACCAAAATAACTAGTCCTCCTGGC
ATATCCCAAGATGCCAATCGCTGCCTTCCAATGTACCTGCTTCGGCGACG
CACAATACCTCGCTACTGCCCGCACTGCATTCGAAATGTCTGGCCTCGTC
TGCGTCGCTAACCACATCAACGAACCAACCAACTCTCGAAACGGAAACTC
CGTGTCTGCTTCCTCCGGATCAAACTCAGAAAGCTTCATTCCTGTCGACA
GTGGAACGCTCTTACCCCACTCTACTCCATACTCTGCCGCCAACTCTTCG
GTGTACGTCTGCTGGGAAATAGTCAATCGTCCACTCTCCATGTCTCTCTC
ATAAAAGCACCCAGAGTACCATCTCAACTCCCCTAGGTTCTTTACCGGCA
CCGACTTGTTCAGGTCCATCCCAAATCGGTCACACCTCTCTCTCTCTCCC
ACGGCAAAAATATCATCTACATGTACTACAAGAATCAACACAACACAACC
ATCCTCAATCAAACGAAACACACATGTATCCACCAGGCACTGCTCAAATC
CCAAATCCAACAAGCACTTCTTCAACAAACCATGCCATGATCGGGACGCC
TGCCTCAAGCCATAAAGGCTCTTGTTTAGTTTTACAATCATTCCTGACAG
AGCTCCACATCCTTTCGGCAAACGCATGTACACATCTTCTTCCAACTCCG
AACGCACAAAAGCCTGCTCTACATCGAAATGACACAAGTCCAGATTCAAC
TCACACGCCAACGCAGCTAACATCCGAACACACGAGACAGAAACAGTAGG
TGCATATCTCTCTCCGAAGTCAACATTCTCTACCTGCTGATCGCCTCTTG
CTACTAATCTTGCTTTCATCTTGGTTGTCCAACCGTACTCATCCGACTTT
ACGTTAAACACCCACTTGGCCTGAATGACATTCTCCATTGACTGCTACAC
TGCAGGCACAAAAGTTCCCGCGCTAAGCAAACCATGTACCTCTCTCTTCA
TTGCATCACTCCAAAGGCGATTCTCGTCGGATGCCATGGCCTCGTTGTAC
GTTTTCGGGGTGACGACGTCGCTGGCGGGGCAGTGTGGTAGATCCGGGGG
CTGGAAAGGCGGCTCCTGGTCTCGGATGGCAGCCTCGATCTCCTCCCGGG
TGGCGAGGGCCTGGACCGCAGCACACAGTCCTGTCCCCCCCCGAGTCCTT
CCCCCGAACTATCGGCAAACATCACTCCCCCGCGCTCGCCATCTCCCCCG
GCTCCTTGCGCTCGTCCTCCACCACAGTGCGGGTCTCCAGCATAGAAATC
AGCTCCTCCTTGCCCATCGCGGACAGGAGGCCCGTGCTGTGCCCGACGTG
TGCCCCGGCCGCTGCTCGCTGATCCGCCCTTGTGCGCCCTCCGATCCTGG
GATCTACAGTCACACCCTCCTTGTTCACCGGGCGCAGCTGTTTTAACGCG
ATCCGCGTCAGCGGAACCATCCCGGGAGGCGGCCTTGGCGGCGCACCCGT
AGCAGACGGGGAGGCAGAACCGGCAGACGGCGATGACGAGGCGGCAGGTC
CCGACGAAGCGGTGAACGGTGGTGGTGAACAGGCCGACGGTGGTGGTGGT
GCAAACGAAACCACGGGCGATGACGCAGGGTCGATGAGGGTCGGGGCAGA
TGCGGCGGCTGGGACGTAGGTGACCGTGACCGTCGGTGGCGTAGGTGCAG
CAGGGATCATTGGAACTTCCCCCTCTCGGCTGGCACCTTCGCCACCCACG
CTACGTTCTGGGTGTAGATGCTTCGCCCGGTGTCGTGGCGCAGGGCGAGA
ACGGTCTGGCGGTTGTGGTTCTCTCCGCAGTTGAGGTAGTACACAAGGGA
GGCCTCGTCGTCCATTTTCGTCCGCCGCACGACGTCAGCGTACCCCGGTT
GGAAAAAGGGTAACACCCTAAAGGGGCCCTTCTCTCCCGTGAACACCTCT
TGCGATGACCGTCGCCCATCGTTGACCTTGCGCCCCATGAGGTTGATCGT
TTGGCACGCCCATACCGCCGACGCGTACCAAAGGCGGTCACCGGCAGCAT
CCAGCCCGGGGATGTCCTCGTACGAGACGCCGAAGACCATCGGTGCGCTG
CGGCGAGCTGCTTTCGCCGCCTTGAGGGTACGCCAGATTGCGCTCTCCGC
CGCCCCGTTATACTGCGGCGTGCTGGGCGGGGTGTACTCGAGGCGAATGT
GATTCTCGTCGCAGAGCTCCCGGAAAGCCGCCGACGTCCACTCGGTGCCG
TTGTCCACACGGAAGCAGTCGACGCGCTCGACGTACTTGCTGACGTTCAC
GATAAGCCGGCGAGTCGCCGCCACCGCATCGGACTTCCGCCGCAGACCCG
AAACGCTCGTCCACCTCGAAGCGCAGTCCACCGCCACCATCAGGTACATA
AAGCCCTCGATGGAATTAGGAAACGGCCCGGCCAGGTCGAGGCAAAAACG
TGCACCCGGCGTGACAGCCCGTTTCCCTGGTCCGCGCGGCACCGCCGCCG
TGGTCCCCTTCGCCTTCATGCAGGCCGCACAAGGACGCAACGTGCCCGTG
AGAGTAATGCCCTGTTGTTTAGCGGTTGCTCTCAGGATGGCATCGGAAGC
GTGTGCAAGGGAAAGGTGGAATTCGTTGATGTCAACAACACACTCTGTGG
ACCCAATCGAAAAGGAGTCTTCCCTGCACTAAGTGCCGCTGCACCGAAAC
CCAAAAAAATCCTCCTGGGGGTCCAACACGTCAAGATGCAATGCCACACG
TTCCGCTTCTTTTTCAGCGATCGGAGATAGAAAATTCTCAAGGGGGTGTC
TCCAATGCCATCATTCACCATCCGTTCATCACAAAGCACACTCAACATCT
CAGTCATGTCTCCAACGCCGACACTCAACTCGGAAGGAACTACGCTGCCG
AAGGCAGCGGGCGGAAAACCACTCTTACTTTCAGTACGCTCAGGTTGGGG
GGTGGGGATGGATAATGCACTCTCAGGCACTACACTGCTTTCAGCAGTGG
GCGGTACACCAATCTCGTTGAAAGATGCAGAGGAAAACGCGGTCACAGCA
GGCACGGTAGGCATAGCATTCTGGATGATGGTGCTAGGGTCAAACGGCAC
TCTGGTTGCGTACGCCACGTTGGATTTCCCCTCTCTAGCAAAGTGCAAGC
CGTTCTCCAAAGTCACACCATGCTTGTCAGACACAACACGCTGCTTGAGA
GATACGACGAAGGTAGAAAACAGATTAAAAGCCAACCCCTCAGCTACAGA
AACATCTGTGAGCATTACAGGCATCAGTGCCATACCTCCGTCATCCTGCT
GCTGTTCAAAGTTCACCATCAAACTTCCGATGGCCGTCACTTCCAAGAGA
TGGCCATTTCCAACCATGACATACTTGCGATTCTCAGGGATGGGCTGAAA
GTTGAACATGTGTGTGGCAGTTTTTGTGAAATGATGGCTAGCGCCAGAGT
CTGACTTCCATTCTTCCCTCAAAGGCAAAACCCCCGCTTCTTCACTCTCA
GCAGTCAAAACCGAATCCACACCGCATGCAATGCCAACACCAACACTTCC
GTAAGCTACACCCGAGCGAGACTTGCCTGGCGGCACAGAATGTGCCATGC
ACAGATGAAAGTAGCCGACCGAGCCCGAGGAAGCCCCGGGAGGAGAGGAA
GAGGACGGCGCAAGCTCGTTGCTGGGCGGGGGCTGAGAATGTGGCTGCTG
ACGTTGCTGCGCATGCATCTGCTGCTGCGGCTGGTACTGCTGGCGGGGCT
CCTCTCCGGTGGCGGGGGGGACCTGTAGTCCTCTCCCCCAGTGGAAGCTC
CGTAGGCGGCGGCAGAGGGATAGCTGGAGCTGTACCCCCCGTCGCCGTAG
CTGGCTTCCTGATCCCACGAATCCTCGTAAAATCCGCCGCCGGAGTCGTC
GTACCCCTCGCCGTAGTCTCCGGCATCATAGTACTGGTAGCCGTCGTTGT
CGTAGCTGGGGGACTCTTCGTGATAGCCAGTGACGAAGCACGCCTGCCCA
TGTTGACGCTGCTGCTGTGGTTGCTGCTGGACGGGTCGGAAAGGTGCCGC
TGACTGCTGTGGAGCTACGTGATCCGCCCCTTGCGAGCGACCTCTCCCGC
GTCCAATAAAGCGTCCGCGCGGGCCACGCCCACCGCGCGAAGAGCGTCCT
CCGAAACCACGTCCACGGGCGCCCGGCTGCTGAGGAGGTGGCGCGCTGCT
CCAGTTACCATCACCATGACCGGTGTGGTACTGCTGCCCATGCGCCTCCG
TCCAAGAGCTCCCGACTCGCCCATCCTGCGACGAGTGCCGTCTGGGTTGT
GATTGTCCAGGGGCAGCTGCTCCTCGCCCGCCGCCACGACCAAAACCCAT
GTGACGACGTTGTACGGCTTGTTGAAGATTGCACTCCGAGTTGCTGTGGG
TGTCCACGTGATGCAGATCACACCAGCGTGACGTCTCGCGATGCTCCAGC
TGACCACCTCTTCCAGCGCCTCTGCCATGCCACGGTTGCCCCCTTCCCCC
GCCATGCCAACCCGTGCCGGCCATGACGAGGGCGTGAGCTGCGTCGTCCC
GCTCCCTCTTCCTCGCCGCGCTCCTCAGGTCTCGATCAGCTTGATTCATC
ACGTACTCGATCTCGCTCAGGTTCAACACCTGCCTACCCGCGAGGATTCG
CTTTTCGATATCGTACGTGGGAGACAACAGGCCACGGACAATATGTTTGT
AGTCATGGGTAGTGTCTGAATTGCGGTCTAGTTCAACAAGCCGCTGTCGA
ATTGCTTCTGCTCGAACTAGATATGACTGACTGCTCTCTCCGGACAACAT
CTCAACATCTCTGAATTCATCCTCTAACCGACTCCTCTCTCATCGAACTC
TCTAGCCAGTGCTCCTAGGTCAGCTTCCTGCAACCCAACCTTCACTTCCT
CTTCTTGTTGAACAACTCCATCCACATCTCTCTCCTGGAAACCAGCCTTC
ATACAGCTCGTGAACATGAGTGCAGCCATGTGAACCGTCTCATACTTGCC
ACTCGTCCCCGTCCAAGGATCTAGACTAGTCAAAGTTGAAGTTCCTATTT
GTAACGTGCCTGAGTGGGGTGGTGAGCCCCGCTGTGTTGCACCGATTGCC
ATCGCGATGGCCTTGGCAAGATCTTCAGTGTTTCCTCGAGCGGACTCCGT
CTCATGCTCCAGACGAATCTGCTCTTCTTTCTACTCAACCCTCCGGCTGA
CCTCGGCCTCTAAGGCCTCTTGGAACCCTCTTCTCTGTTCATCCGACAAA
TCCTCCAGGCTCACTTGTTCTTTACTCCTCGCCATGATGCCGTGATGATG
ATGTGGGCCAAATACAAAATACAAAATACCCCGCGAGCTTCAACGCCCCG
CTGACGGAAAAATTGACGTCGCACTAGTGTCATGGATAATCCGTACGGGG
TGGAGCTGGGCCGAATCCGGCCGGGATATGTTTTGGGCAATGTGTACCCT
GAGTGTGTGACTCGATGTTACTTCGCTGTGTGAGCGGGATGCTTCGCTGT
GTGAGCGGGATGCTTCGCTGTGTGAACGGGAAAAACATGATTGATTATTG
ATGCGTCGCCCAAAAGAAAGGGGGTACACATAAATACTCCATGATACTCC
CATGGTACCCTCATTCCACAAAATTCTCAAACGTACCCTGTACCATACTC
AATCAAATGTCCGTTTCTCTCAATCAATTCGAAATAATTGCATACTGCTG
CGAGTACATCCAACATACTTCGAAGTAAAGAGTAAGCCGGTGGAAAACGT
TCAACGACAGCAACAATACCCAACAGCAGTTCTTACAGATAGGTGGATGA
AGCTCGTGGCCTGCGCGGCAGCACACGCCCTCACCACCCCATCTGTAGCA
CAGTGGAGCATCCGTCGACACCATCACCGCATTGGGAACTTAGGAGCAAC
ACACACAGACTTCGCTAGATGAAAACAATCACAGTAGAAGGACGAGCTAT
CACTGCACACGCATTTTCTTTTCCGCTCCCGATCGGTGTCCGGATGGGGA
CGGTCCCGCTTGGAAGCAAGCAAGTCCAAACTGAGCAATCATCTAGCGCG
ATGCCTCCTTCACTAACATGAGCGTACAGCTAGGACAACAGGCAGCACGG
CCCGCCGCCGCCACCCAGTAGCCAACGAAATTCAGCACCAACGGGAAGAA
GGCGAGCGTTCACTGCACACTGGCTCACAGCGTGCGTTTTGTTCCATCGC
AGAGCGTGGTCTTTGTCTGTGAGAGCGGTAGCCGTATGGAGTGAGGGGGC
GTATGAAACTCGTGCCAGTTTATTTTTGTGATGAATTACGCAATCGAGGA
CCGGTGCGCCACCGCATGCACAAAATATCGCGCCGAGCCGAAAGACGCGA
GCGACAGCTCCGAAAAACCAGCGTAACATTTCCCCCGACAGCAGCACACA
TGAAGTCGATTGTCAGCTGGTGCCGCTGCTGCTGTGTCGTGTTGTGCTGT
GCCCATATCCAACACACAACGCGTTCACGTTCGCGTTCGCGTTCGCCAGA
GCGAGAGCGTGCGAGAGAGGTAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGATAAGGAACCGACACAACGGATTCATTCCCGCGTACCGGTAATCC
CCCTGCCTCCTACCCCTCTGGCGTTGAGCATGTCGACGAAATCCCATCGT
CCAAAAAACGCACAGGCGAGAAAGGTGATGTCCCACGAGGATGCCCAAAA
GGCGCTGACCGCCTCCTACGAACGCTTCGGGGAGCTTGGGTTTGACCTCG
AAGCGGCACTGTCAAAGGTGGACAAGATGCTGAGCGTGATGGACGTGAGT
GAGGAGCGGGACAATCCAGAACAGAACAATATGTTTCATCTATGAAATGA
GCACCGATACGTATTACTTTGTTTTTTATTGCGATATTTGGTTGCAGTAT
CACAGCAGAGACCAATTGCGCGGTTTAGTGGTGGAGCACGTAAGTATCCG
AAATTGATCTGTGGAAAATTTCAGGGCCTGGTATGTGCCGTGGCGTTTTT
TTTTGTGTTAATAAGGAGACCGATAATATCTTGAAGATAATGCAGGGCAT
CATAGGCAAAAACGCCTGCGTTTTTATGGTGTATTTTGTTTGACGTCGAC
AAGAAATATCGCCTTCATGTGGACGCCAGTACATGGCGGGAAAAATGAGG
GGGGTAGGAGAACGGGTATAGTTTGGCAAATACGCAGAAGTGGCGGAAGC
TGTTGACCGTCTGCTTACGTTTCGTTACGTGTTGCTCGCTGCACGGAGGA
CTCTCCACCTGTCGTAGACAGCAGTACAAGGCCTCAGCCGCTGTGGAGGG
ATACCTGGAGAGTTTGGCAAGCTCTGTGACCTTCACCTTACAAGGCGTTG
TCCTTGTCTCAACCCCTCTCAGACACGTGGTTCACCTATCGGGAGATACA
ACATGGCACTAAATAATGGTGGAACTATTCGGAGTGAGGGTTCGGAGACA
ACATGGAAATGCTGCCTTGTTCACACCCGAGTGTTGGCAGCGTATTCTGT
TTTTTTTCTTTCTGAAACGGATCGGGATGTATTCCCCTCGGTCACGTCTT
TTTGTCTGCTTTTTCTCCCTTCACTCCTACGTCTTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCCTCCCTCTTGCTC
GTGCTATTACAAAACTGTCATCCTACACATAATTGGCGCAAGAAACTGCT
GTCACCCAGTCGCTCAGCGCAAAATTGCCCTTGTTCGATCCCACTTGTTC
AGGTCTTCTGGTGCAGCATTCTCTTTTTACCAGACTCTCCAACCATGGCG
CTTTGCGTTCTCGTGTACTTTCTGTCTGGTTGACAAAAGACCAGAACGTC
CGCCCAGGCTTCTGAGGGATGAAAGGGTCTGTGGCAACCAGAGAGACGAC
CACTGTCCCTGTACCCCTCTCCTTTCCCATGCTTTTAAACTTGCAGATGG
CAGTGCGAAGCTTGAAGGCAAGCGGGCCAGACGGAGCACTTTACCATTGT
TTCGTCAACAAGGTTTGATATGCCACGGGGTTTCTTCTTCTTTGTAGGCA
TACGATACGAAGCACGCTCGTTTGTCTGTTTGTGTTAATAATTCTGCAAG
AATCAACAGACGAATGATCCAGGTCCGTTGTATGCGAACCAAACGGGGGG
GGGGCTCCACACACGCAGCACGCGAGGCTTCGTGCGGATCCGTCGACAAC
CCGCGCACACCCTTCTTGACGGATGCCGAGCAACATCACCGAATCCGAGT
TTTTTTGCCCGCGTAAAAAAAAAACGGAGCAATGTCGGTCGATGTCTTCG
TTTGATCCCCAGAACGCCGATGAGATCGCGAAGCTTCACGGGTCGAAGCT
GGAGGACTGGCAGGTCCAGGCCTTCCGAAGCATGCTCGAAAAGTTCGGGA
AAAGGCAAGGACGGGTCGAAGGGAGGGTGGGTGGTAGGGACGGAGGACGA
AAGTTTGCAGCGCGCCTCGGATATTACTCGATTTGCCGTTGCATGGTGCG
ATAAGTTGCCCGAACAGAAAAGCGGTACGAAAATTGATTTAATCGTTTTC
TGATATTTTTCCTGCTGAAGCCGCCGTGACGAATGCGCCATTCACCCCCC
AAACAGCCTCGTGACCTGCGGCAAATTTTCCGTGGCATAGCCCCCTCCCC
GGCGCCGAACATGTCGCTCGTGTGATGTGCAAGTTCACGTAGCACAGCGG
TAGTGGCTGTCTTCACGTATGATTTTCCCGTTTTTTTTCTTTCATGACCA
CTGGCTTTTTCTGTGTCAATCGCGTTGCGCGAATGAAACGTAAAAAAAAA
AAAAACACTTTGCACAGTCGGGGAGACCCAGCAGGCATAACCGCCGGCCT
GTCTCCGCATCGCACAGCAACCACGTTTCGGGGTCGTGCTGAAGAGCGAC
AATAACCACGAGCATAAACGTTTTTGTTGTCGTGCCAATTGATTTGAGTT
CACATTTCAGAATTTTGGCCGGGAAACAAGTTTATGGAACAAGTGAATTG
CCCCGTGATCGCGAAACTCAACCTGATCATATGGTTTAAACATCGCAGAA
GAAAGGGCGGTATTGCGTCGGAGATGTCGGAATGACCTTCGACGTGCAAA
GAGCAAGAGCAAGAGCACACGTGTGGTCGAGCTCTTCCTTTGGTTTTGCC
AACCGACCCATTGACTTTCCGTCGTAATTCGCGCTGTGTCGCCAAATCGT
TCGATACACGGTGCAGGATTGTTTCGAGTACCAAACGAACGTTTTAATAG
CACTGATGTGTGCGCGCGTTTCTTTCTCTTCTCTTCTTCCTGTGCGCACC
GTGAAACGCTTCTGCGATCATTTTCTCCAACAAACAATCACCTTTCCGGA
CGCTCTAGCGTAACCAATGCGTTTGTTTCCTCCTTCTGTGCGAGCAGCGA
GGATGAGCAGCTCGTGCTGATGGACTTGAACGAACTAAGTGTACATATCA
AGACCAGCACGGTAACAGAAAGTGGCAAGAAGGAGGTGAGAGCGTGTATG
GCACGCAAAAAAACAAACCGGGGTGGCGTTTGCGGCGTTTCCTATCCACG
AGTTAGCTACAGTAGAGAGGACGCAGCTCTTGCGTGGTTGTGGCACGCTC
CGGCACATGTGCCGAAGACGGTGCCTGGGGGGGTGGTACGTTTTAAACAT
TGGATGTTCGAAACGACAAGCTTCCTTCAGTACCCGCGGAAACGCCAACA
CTGCGTTCCAACACCCAGGACACCACACTGCCGTTTTTGACAAAAGAGGG
TGCGGGGCACGAATGTTGTGTGGCCGCCGTTTTATACCTTATCGCTATTG
GTTTTGGGCTTGACTTTTTGTATTGCTATGTTCACGTCAGAGTTGAAGGT
GATCTCAGTGATAGTATTGAAAACGTGTCCTTTGCAAAGCAGTCTGACAT
TGTTCGTGCCTGGGAGCTGTCGAGCTCAGGGACTACAACATGTTCCTACA
ATGTGTTCGCCGCACCTCTTCCACGAGTAGCCATAACTTTTTGTCCCCTG
CACAGCGGTAGCTCCGTGCTGCGTTCGGCCCAAGGTGGCCCTCTGCCTCC
GTCTTCCCGTCGTCGAGACGAATTTCGCTGCCGACGTTAACGGCGACGCA
GCGCGTGCACAAAATATCCCGCGATGAGCCAGCCCCCGAAGAATACCCCT
CGGCGATCTGATGCGTAGACATCCCAATTCGAATCAATCTTGAGTTTGTT
TTTGTGTGCTTTCGCTGTCGTGGTAAAGCGCGGTGGGGGGTTTCGTCATG
TCTCTCGTCTCGCCCGTGGGCGTGCTATTTTGCGCTCAGCGAACCTTCGG
GTTCACAAGTGGAACGTCTCGCCATAATTTTAATATTGCCGCCCACAATC
AACACCTCGATTGCATAGTTTCCCACGTATACCATGCATGTATATACTAC
GCCGGCAAATACTCCCGTATTAGAAACAACCGCGTCTTTTAGCACGTTTC
GACACGCAATCGACGGGGCTCTTGAGATCACCCTATTTTGTCGATAACGG
CAGTTCTACTGTGTCCCGGGTGTTGGAATGCAGTGTTGGCGTTTCCGCGA
GTACTGAGGAAAGCTTGTGATTTCGAACATTTTGTGCATGAAGTTTGTCC
CCCAAGGACAGTCTTCGGCACATGTGCACAACCCCGCAAAAGCTGCGTGA
TGTAGGTCCTGCTTCCCCGCTGAAATGCAAGGCGTTGAAAAGTGTCGAAA
ATTCGCCGCCCTGTGGACCGCTCGGCCTTTTGAGTTGCTGATCATAATGC
TGCGACTGCCTCTGCCGCTGCCGCTGCCTCCGCCGACTCTACCGCCGTTG
TCACGCTGCTGCTGTACCCTCATCCAATCGTTCGTCCTCGTCGGCTTCCA
CGTCAAAGATGGTTAAGTTGTTCGCGGACCAGCTGGTTGAAGACTTCTGG
CTTTCGGTGAGGAACCGGTGTTCATGCCGCGGTTTCCTACTGGATATGCA
TGCTGAACCCCCCCCTCCCGTAAAAGCCCTATTCATATAAAGCAAAACCA
GGCACCCGCGTTAGCTAGTGTGTGTGCTGAGACCCTCTGGACGAGCGTTT
TGGGAACCTCTGCTTTGCTGTTCACACCGCGCTCCGGCACCCCTACAGCT
GTACAGCAGAACGCGCGGGAAGTTAAGTCGGTGTTCGCGTCACTTCTGGG
ATCTCGTCAACGAGGGCCACGGTAACAAGCCTCCTGGTAATAATGACAGC
AAACGTATCCCTGCATAAGCCGAGGTGACTATGGATGATGCCGATATTGT
AAACAGCTTTGCCCCGCCGCTTGTTCTCCTGTCCGCCGGACTTACGCTCG
TTTCGTTTGTTTGTTGTATCCTTGGCGTCCGAATGTTGCGTTTTTTGCTC
GGTTCCGGGCAACAATTGCAGCGTCCGGGTAACGACGTACACTACCGATT
GGGCGTGAGGACGTACGTAGAACTGCCAGAGCTGCTCAAGACATTCGACT
TGGAAGTACCGCAGGTATGTCTCTTTTGCTTTCTGGAAAGGCGTCTTCCG
GGTTGAAAAAAAGAAGGGAGCCGCTTTATTCACTCTGTTCGATGTAGCCT
ACTGCTGTATCAAAACTTGCGTTTTGTGTGTTCGTATTTTGAGCACGCTC
ATCGTGTCTTGCGGCGGCATTGTCAAGCGGTGCCACACATACGACCTGTT
GGTGTCGTCGTTCTCTCGTTAGCGTGTGCCTGTTTCAACGATCTTTCACA
AGTCTCGGACCATGAATTTGAGAACATCCAGACAATCCACATACCGTTCT
GCGCGTCCAAACCTTCATCCCCCCCGTAAGCCGCGACCGTTACCGGTGCC
GCCCGTTTTGATAGTTTTTTCTCAGCGTAAGGGTGGTGTTGGGTTTTGGC
CTGCCCGGCAAACCTGCATTAGCTACGGTGCGCAAATCGACGTCGTGTAA
AAAAATCGTGTGCGGAATTGTGGGGAACACTGCTGTATGGAAGTATCATA
GCACGGATCTAGGTCCGCAGGCTGTCTATCAAGGCGCTTCTTCTTGCATG
CAAGTTTCCTTCCCTCGTCATCCTATCGGGTGCATGTCATGCGGTCCTGC
TTGCGTCCACTCTGCTGCTCAATAGTTGTCTACAAACGCGCCGTTCTCGG
CGCCAACAAGAGGTGCAAGGTGTCCGTCGTGAATCGTTGTCGGCATCTTC
TTCTCACCCCCATTCCCGCCGCGAAATCTCTCTTACGGTCTGCCCCCCCC
CCCCCCCGCACCAATTCACAGGTCATTCACCATTGATTGAGGAGACTTTG
GTGTTATCTACTGTACAGTGCGGCTATCACTGCACGTGTCGCATTCAACG
GACCTCGGAAAGCTCGGGCAGGATCTATTGTTTCTTCGGAGGCATGGTAA
ACACGGCTTGTCGTGCAGGAAAAGGTGTATTTTAATGGGATGTGTGTGCT
GCCTTCCGTGGGACACGCGCTGCTACGAAACTACCGGGAACATGGCAATG
GGTTGGGTATTCAACACCAATCAAAGGAAAAGCTGCGGACGCGGGAAAAG
TCAACCACCTAATCCGGTGCGTTATCCATTTTACCTCTGTGAGAAGTAAC
ATGAGAGCCATTTTGGAAAATTTGGCCCTGAAATCACCTGCCTGTAATTT
GCGTATAATAGAGAGTTCGGAGTTGGGCCGAATTTCGGATCGGGTGTAAC
GTGGAGATTCAAAACCGAGGCGCGTCTCCTGGAGTAATAGGTGTGTTTTT
TGTCGGATTCCTGTGGTGTTGCTGTCAGGGGGGGGGTGAAACCAAGGCAA
GTGTTGTTCATGTGAGATGTGGTGTCGAAGTAAAATATACTCGAAGTATG
TCTTCCCTACTGCAGCTGCTTCCTCCACGCGGTGTACTTTCGACGAGGAC
TCGCATCGCCATTTTTTTGAGAAAGCGCATCTTTCTCGATTCCGCGTCAT
GGGGTACCGAG

Coding sequence (CDS) from alignment at P-littoralis_Contig166:428404..443664+

>mRNA_P-littoralis_Contig166.96.3 ID=mRNA_P-littoralis_Contig166.96.3|Name=mRNA_P-littoralis_Contig166.96.3|organism=Pylaiella littoralis U1_48|type=CDS|length=585bp|location=Sequence derived from alignment at P-littoralis_Contig166:428404..443664+ (Pylaiella littoralis U1_48)
ATGACGGCACACGTACTGAAAGAGCCCTTGCAAGCCTTCGCTCAAATCCT
TATGGCGAGAAAGGTGATGTCCCACGAGGATGCCCAAAAGGCGCTGACCG
CCTCCTACGAACGCTTCGGGGAGCTTGGGTTTGACCTCGAAGCGGCACTG
TCAAAGGTGGACAAGATGCTGAGCGTGATGGACATGGCAGTGCGAAGCTT
GAAGGCAAGCGGGCCAGACGGAGCACTTTACCATTGTTTCGTCAACAAGA
ACGCCGATGAGATCGCGAAGCTTCACGGGTCGAAGCTGGAGGACTGGCAG
GTCCAGGCCTTCCGAAGCATGCTCGAAAAGTTCGGGAAAAGCGAGGATGA
GCAGCTCGTGCTGATGGACTTGAACGAACTAAGTGTACATATCAAGACCA
GCACGGTAACAGAAAGTGGCAAGAAGGAGATGGTTAAGTTGTTCGCGGAC
CAGCTGGTTGAAGACTTCTGGCTTTCGCGTCCGGGTAACGACGTACACTA
CCGATTGGGCGTGAGGACGTACGTAGAACTGCCAGAGCTGCTCAAGACAT
TCGACTTGGAAGTACCGCAGGTCATTCACCATTGA