mRNA_P-littoralis_Contig151.76.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig151.76.1
Unique NamemRNA_P-littoralis_Contig151.76.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig151.76.1 vs. uniprot
Match: A0A6H5L2H3_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2H3_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 9.050e-20
Identity = 93/304 (30.59%), Postives = 133/304 (43.75%), Query Frame = 3
Query: 1962 FIDRHTESLFQPILAQLKTCGASSFVTQRIRREFGSAVAYNATVLASYSEEVED---VLRGLVTSQPL------INLCHAQAGTELVDLQVTTG---RTREDLSMYARTSLRAFVDLREGSDEVIKHVVRVSYKLTATAASHVVVLGAGGVYLCSCLQLLQHGFSCRHVFAVM-QLQGPALPSACCT--FDANWLHPRWRNVRSLQDEKWTASELVPDKHKWTAVGEGPLWDG----------GENLQGAGQLSGGEDDERDSSPKVSEGA--RRKTYADGLATTREMVAEVVDSVSPAVALDI 2792
            F  +H E    PI  +L++ GAS +     + E G + +Y+  V+   + + +     L G V  Q L       NL         +++    G    + ED +++ARTSL A +DL       +   VR  YKLT +   HVVV+G GG YLCSCL+ L+HG  CRH FAV+ +  G           FD N +H RWR      D  WTAS ++         G G  WDG          G      G   G    ER +           R+ +A  +A  +E V E++ +V  A AL+I
Sbjct:  165 FQTKHLEGFLAPIREELESVGASQYCQLEAKDELGGSQSYDVEVICVGAADDKGHPVPLEGGVLRQQLEAAHFDFNLYEEAPPDTDMEIDCKLGPEAESTEDNTVWARTSLEAPLDLVSRVPVHLAAAVR--YKLTPSRPGHVVVVGPGGFYLCSCLKFLRHGLPCRHYFAVLVRFIGGKYGGVLLNHEFDGNSVHTRWRQSPDGSDAPWTASRVLE------GAGHGDGWDGCDHGQDDNFWGPTYDDDGGEGGVHPAERAAKAVADRSGSDHRRVFATLMAKNKENVTEIMRTVPHAKALEI 460          
BLAST of mRNA_P-littoralis_Contig151.76.1 vs. uniprot
Match: A0A6H5L372_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L372_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 1.150e-14
Identity = 79/229 (34.50%), Postives = 110/229 (48.03%), Query Frame = 3
Query: 2172 AQAGTELVDLQVTTGRTREDLSMYARTSLRAFVDLREGSDEVIKHVVRVSYKLTATAASHVVVLGAGGVYLCSCLQLLQHGFSCRHVFAVM-QLQGPALPSA----CCTFDANWLHPRWRNVRSLQDEKWTASELVPDKHKWTAVGEGPLWDGGENLQGAGQLSGGE--DDERDSSPKVSEGA---------RRKTYADGLATTREMVAEVVDSVSPAVALDIFSAVRE 2810
            A   T+L   Q+  G    D +M+ARTSL AF+DL E  D  I+  V V YK  A   SH+VV G    +LCSCLQLL+ G  CRH FAV+  L G    S       TF+   +H RWR    + D  W+ S ++      ++ G    WDG  N +G  +   G   D+  D       G          +R+ YA  +AT++E+V +++ SV    AL +   V E
Sbjct:  216 APPNTDLEGDQIA-GEAAVDNTMWARTSLSAFLDLIE--DIPIELFVAVRYKRAANRPSHLVVFGLHNFHLCSCLQLLRRGLPCRHYFAVLVNLIGRTGESDEMAFTHTFNGACVHNRWRRREVVNDSPWSISSVL------SSSGHSVGWDG--NDEGRDEKYWGPTCDEAVDGIHPAGPGRAAQDRSASDKRRVYAHLMATSKELVGDIMRSVPLHQALSVQDKVGE 433          
BLAST of mRNA_P-littoralis_Contig151.76.1 vs. uniprot
Match: A0A6H5JEJ0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ0_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 4.260e-5
Identity = 45/186 (24.19%), Postives = 69/186 (37.10%), Query Frame = 2
Query: 1322 RAKLPFCAFIAVDKENKSRVICQALLPNEQASSYESALTHLIKVCGG--------------------------------------------------------LHPKSF-------NRHWQDILRLTDGTKANDYMRDSVCVNKRKWAFCYRSTALVVGMSATQRVESFFGVLK--RVIHGSGSLV 1684
            R  + F  FI VD ENK+ V  Q    ++ + +Y+ AL H   +CGG                                                        LH  +F       +  W +I R   G+   +Y+   +  + R W+ C+  T + + M+ATQRVE  F VLK  R+++   SLV
Sbjct:  152 RYGMHFMLFIGVDSENKTVVFAQGFFSDQSSDTYQWALKHYCTICGGQPEVIITDADAGMTHAVETFLPSTTVHLYCLWHVMKNVRKNCARALGKKASRFYRLLHAAAFAATEEACSDAWSEIFRHVKGSDCEEYVTGHLLRHHRHWSRCFFPTTMTLNMTATQRVEGMFSVLKKGRIVNRRCSLV 337          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig151.76.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L2H3_9PHAE9.050e-2030.59SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L372_9PHAE1.150e-1434.50SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JEJ0_9PHAE4.260e-524.19SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig151contigP-littoralis_Contig151:474421..481438 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FLF6
PFAMsMULE
Model size3412
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons7
Evalue1.42e-07
EggNOG OGs2CMGX@1|root,2QQB8@2759|Eukaryota
Cds size732
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig151.76.1prot_P-littoralis_Contig151.76.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig151 474864..475595 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789724.473665-UTR-P-littoralis_Contig151:474420..4748631680789724.473665-UTR-P-littoralis_Contig151:474420..474863Pylaiella littoralis U1_48UTRP-littoralis_Contig151 474421..474863 -
1680789724.49924-UTR-P-littoralis_Contig151:475595..4757871680789724.49924-UTR-P-littoralis_Contig151:475595..475787Pylaiella littoralis U1_48UTRP-littoralis_Contig151 475596..475787 -
1680789724.5107238-UTR-P-littoralis_Contig151:476038..4765261680789724.5107238-UTR-P-littoralis_Contig151:476038..476526Pylaiella littoralis U1_48UTRP-littoralis_Contig151 476039..476526 -
1680789724.5248268-UTR-P-littoralis_Contig151:477231..4773141680789724.5248268-UTR-P-littoralis_Contig151:477231..477314Pylaiella littoralis U1_48UTRP-littoralis_Contig151 477232..477314 -
1680789724.5375142-UTR-P-littoralis_Contig151:477933..4786331680789724.5375142-UTR-P-littoralis_Contig151:477933..478633Pylaiella littoralis U1_48UTRP-littoralis_Contig151 477934..478633 -
1680789724.5487373-UTR-P-littoralis_Contig151:478775..4789821680789724.5487373-UTR-P-littoralis_Contig151:478775..478982Pylaiella littoralis U1_48UTRP-littoralis_Contig151 478776..478982 -
1680789724.5635123-UTR-P-littoralis_Contig151:480638..4807041680789724.5635123-UTR-P-littoralis_Contig151:480638..480704Pylaiella littoralis U1_48UTRP-littoralis_Contig151 480639..480704 -
1680789724.5806224-UTR-P-littoralis_Contig151:480937..4814381680789724.5806224-UTR-P-littoralis_Contig151:480937..481438Pylaiella littoralis U1_48UTRP-littoralis_Contig151 480938..481438 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789724.4863324-CDS-P-littoralis_Contig151:474863..4755951680789724.4863324-CDS-P-littoralis_Contig151:474863..475595Pylaiella littoralis U1_48CDSP-littoralis_Contig151 474864..475595 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig151.76.1

>prot_P-littoralis_Contig151.76.1 ID=prot_P-littoralis_Contig151.76.1|Name=mRNA_P-littoralis_Contig151.76.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=244bp
MYARTSLRAFVDLREGSDEVIKHVVRVSYKLTATAASHVVVLGAGGVYLC
SCLQLLQHGFSCRHVFAVMQLQGPALPSACCTFDANWLHPRWRNVRSLQD
EKWTASELVPDKHKWTAVGEGPLWDGGENLQGAGQLSGGEDDERDSSPKV
SEGARRKTYADGLATTREMVAEVVDSVSPAVALDIFSAVREVADSRLRAE
GVLRVVTPDLTGGSGQGALQNAKPALTKGRKKNKMHKSSTERR*
back to top

mRNA from alignment at P-littoralis_Contig151:474421..481438-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig151.76.1 ID=mRNA_P-littoralis_Contig151.76.1|Name=mRNA_P-littoralis_Contig151.76.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7018bp|location=Sequence derived from alignment at P-littoralis_Contig151:474421..481438- (Pylaiella littoralis U1_48)
GTGGGACATTGCCACGAACACAGTCATCAACGCCTTGCGTGAAGATGGGC ACGAGAATACCTGCAGACGCAATAAAAGAACGGTGTGTAGCGAACAATCA CCATAGACGCCGAGTCTTATACTTGATACCACAGGTGTAGTAATGATTTG ACGAAGAATGACTAAACGATACCCACGAAAAAGTGTACTAGTATACTATC TACTGTAGAAAAATACGAGTGTCGCAGTTTCAAGACGGTCGACATCCTAC GGGCGATACTTTCCTTCGTTGTTTATTTTTAAAAAAATGCTGTCTCGCGG TTCCCTCTACTCGCCTTCTCTCGCAAAGTATTCAACGCTCAACAAGCATC GCGAAAACCAGGCTGTGAAAATCGTTGGTATTGCGTCCATATCCAGTGTA AGTACGCGGGCGTTCCAGACCATCGCACACACCCCCGTAACATCAGGGCT GGCGGCGATGCTCTGTTGTGGAGCAGACGCAAAGGTTGCGGATCGCAAAA GGTGCGCACAGAAAGTCGTTCGGGGTTTTGGGCGACATGGTTTCGAACTT CTAACCTCTCACGGGTGTGGGTATGCTTCGAACTTCCTTGTCATTTCGTT GCGTTCTTGAGTTGTCGGTTCGAGGCACACGCATTACGCCTCCCGTCAGG AAATACCCTTCGACTTCTCCCCCCACATGGTTTACAGAATGCCGCCCGCG TATGCGTCATTTCGTAATCCCCTCAACTCGCCAGGTCAAATGCCCTTTCA AAGTCGTGATATGCTGGGCTGTCCGAGACGAAGCGCCTCGCATCACCCAG GCGAGTTTACGTACGGGTACATGAACGGCCATTCGTTGGCGTGTGTGTCG TTGTTCCGAAAACTAACTTATTGTCGCGTGGCGAGTTGATTTCTGCAGAT TCGGCGGTTAGCAGTATGTTTCGATCGTTGTTGGTGCAACTCTCTACACA TGGTATGTTACATTCAACGTCGTTTTAAGCGTGACGTGGTTTGTCCATGT TTATGAAAATTTCCATATGTATGGAAATTTTGAGGAGGCGTTTGTCCATA TTTTGTCCATAAATGTGGAACCGACTTGGGCCTAAAAAAGTGGCCCAAGT GCTTTCAAGATTTCTGGAAATTTTTACATATTTTTATATTTTTCATGTAA TCAAAGCATTGTCCGTATCAGTGTAGCAGCACGCCGTGAGACCCCCGCGT CATGGCGAGTTCGCAGGGACATCGAGGCAAACGTAGAGCCAACGCGTCAA CGGTTCGGCCGCTGGTTATAGTGGACGGAGTTGGCCAGGCGTGCCAAAAC AAATACTTCGTATTTGGTTGAGAGTTGCCCTTGTACAATTTCTGAAGGTA CTCGCATAATGATGGTGAAGTACGGGAAACAAAAAAAGCAGCCAAGACAT GTGCACGACAGCACCACAGCAGCGTCAGTTCTTGTTGCATACAGCAGCAC TCAACGCGAAACCTTCGTGGGTATTGTCTCATTTTGCAACTCTCCATCAG CAAGGCGTTGCGCTAGAGGTGGGGTCATTCAATCGACAGACTGTATCAGT ATTGATCGCGGTGTATCTCATGTGTCATGTGCTGCGTACTGTGCTGCTGC TGCTGCTGCTGTAGCCCTGTAGCCGCTCTCTTAGGCCGTAGAACAAGCGG TCTATTTTCAATTTTCGAAGCACTACGAAGTGGTGAGATTGGTATGTCGG TGGACTTTTGAAGATGTTTCCAACAAGGAGCGACGCTTCTCTCTGTCGAT TGAATGATCCCGCCTCCGATCCCACCACAGAGAACAGTGAATGGTTACGA CCGCCGAGAAGGTTTTAAGTTGATAGGTGGTGTAGGAAACGAGAAGATGA CGGTTGTGTTGGTGTGTATGTCCTTCACAACACTTGGGATGTGTGTGGTT GATCGCGCGTACGTCACCTCTCATGCATTTTTTTCGAGAACTTTCTGGCG ACCATATTTCCATGAATATGGAATCGGCTTCTAAACGTTGAGAATGAGCT CGCTGTATTCCATCAATATGGATCCACAATTATTTTCCGTATTTAATTGT GGAACATGTTTAAAACGACCCTCACACGCGCATTCCTGCAGTTTTCTCTG CAAAGGATGCCTGCTCCGAAGTATCTACGAGTGTTTTGCTCATACCCGAG GGAACATTGCACACCCGGGGCGGTTCGCGTAGCTTCATGCCGGACGAACA TGCACGCCTGTTATGCTCCGACTTCAAGTGCCAAATACGTTGCGAACAAA AAATGCAGGGACACACTTCACCAATTAATACGGAGCAATCAAAACGGACT TTTGCGTTGAAGACAGTTCTTTGAAATTTCCAAGGGCGCAAAGTGCGCAC AAAAACAACCGACAGATATGACTTTATTGGACTACGTGGATACACCTTTT TATTTGACGCCCACCTTGTGTTCAATCCTTCCCAAAATCGTGCGCCCGAC GTGTAGACAACTTTACTGCACAATCACGCCATCCAAGATCCCGCTCGTGA CGACCCGCGCTCGATCCCGGATCACGTCGTGCTAGACAGACTCGAGGATA TTCGTTTCTGGGCTCTTTGTAACGTCCAGGTGCCCAAGATGCTCGATATG CTTCGGCGGGACACAGAGTCCCTGGTTACTCGAGGCGTGCTCGGTGCGCC GTTGAAACGAAAGGTGAAATACTGTAGCCCTGCGCGGATTGTATCAAGTT TGAGTTTACAGCCACTGCTTTTGTTGTAAAAGGAAGCCTAGTGCGATTAG AACTATTGCTTGTTCGCCAGCTATGCTCCTTATTTGCTGATGAATTTTTC TATAGGTCCGGAACATCGTCGATGCCATGCGGCGAAGCAAGTATGCCTCG ACGAAGGACGCCCTGGATTTTGTGACTGATATCAGCCAGGACCCGGGCGC CTACGTGAAGTATACCGTGGACAAGAACGAGCGGTTGGAGATGCTGTTCT GGGCGTACACTGGCCAACGGGAGATGGCGCTAACCATCGGCGAGGTCCTC ATTCAGGACAACACTGCCCAGACAAACGGGTGAAAAAATCCATTACAGAC ACTGGGCCGATGTTGTCGATGTATCGGGATCAATGCAGGTGGCATCGAAC TACACGCCACCGGGATAAATTCGGTAGTAGTTCCCCAAACGTCTGCCAAG CCATATCACTCTGTCCTTGTTGTCCGTCTCTTCTGATACGCATCCACCTC CCTTTTATTTTCCTTCTTTTTCGATTGTTTTGGGTGCGTGTCTCTTATCA ACGAACGTCAGCCAAGCTGAGTTCACATTTACATTCTGATACAAGCCCGG TACGCATCAACTTACTGTGTTCTCGGTTCTGCTTTATCTGTTTGCGTTCT CCAGGGCAAAGTTGCCGTTCTGTGCTTTTATTGCCGTGGATAAGGAGAAC AAGAGCCGAGTCATTTGCCAAGCGTTGCTGCCAAACGAGCAGGCGTCGTC GTACGAGTCCGCTCTTACCCACCTCATCAAAGTTTGCGGAGGACTACACC CCAAGGTAAAATGCCGTATTTGGTGTACGGCACGAAGGAGCTAAGGGGTA GTGCCGTTCTCTCGTTCGAAGCTTTAAATTCTGCTTCTTGCGTGCCCCGC GTTGGTTACGTTTTCTTGTCATGCTGGTCGTCCCCACAGACGCGGATCTC GCCGTGATGACAAAAGGTGGGAAGCTCATACTACAGACACTAGTTGCGGT ATTGTGTGAACCAGGTCATCCTCACAGATGCGGACCTGGCCATGACGGCT GCAGTGGAGAAGCTTATCCCGAATACACTACACCTGTTCTGCATCTGGCA TATTTTCAAGAATATTGCCAAGAAGTGTGCTAGTGCTTTCAAGGACAAGA CTTCTCGCGGTGACGTGATGACTCCCTTCAAAATGGCAGCGTTCTCTGCC ACTGAAGAGGTGATTGTCTTGGTAAACACCAGGGCTCTCACCCATTTTTT CATCGATCAGTAACTGGTGTGCCCGATGCACATCTGGAACCCTTGTTGTC TGCCCCCCCCCCCCCCCGCCGCCTTCGTTCCTTCTTGTACGAGTACGGTA TTCTATTGTGTAACCTCTGGCGCACTCGGTGTTCCCGGTTCATGCATTTT GGCCCCTCTCCTGGCTACCGGCAGTCCTTCAATCGACACTGGCAGGACAT CCTTCGCTTGACCGACGGTACCAAGGCCAACGACTACATGCGAGATTCTG TCTGTGTGTGAGATACCATACTTGCATAGGTGTGCTTCGTACATTCACAC ATGCTACTAGTGGATCGGGGTTGAGAAGCAGTGTGCGTTGGAGGGCCACT TATCAAATATTTGCGTTTAGCCGGGTGCCTTGCTGTTTGGTGGAGTAATT GTACCGTGGCTGCAGCGCTTCCGCTGCTGCAGCACAGCTGTTGTTGTTAC GCCAGCACAACGAACACAAAACGCCTCTCATCATGTTCCACAAAAAAGGA CCCCAATACTGTGATTACGCGCCTTCGACAACACATCCGTACGCACAGGA CACGAGCTGCGATTAACCCAGCAGCAGTGGTTCGATACATCAGTTCAAGC CCTTCGCCGCAGCGATCTGTCCTGAACTGGCGCCAAAGTATTGCGAAATG TGGCCATAATCCCGGACAGACAGACAGACACGCACAGACAGACAGACGCT TTACGCCCTCGAAAATGAAATATTGGCACCTCTGTCTCGTTAGTTTTTTC ACATTTCATTTTTATGTTCGCACATACTCTCACATCTGCACATCACCTGC ACATCACGACCAAGTCTGTATGAATTCGAAGCAGTTTGACAAGAAACTTA CACTTCGCTGCGCTCGTGGACTCAATCTCATTACAACTTATTTTCGTTGT CTGTCGCTACGGTTTTAATCCTTGCAATCTCGTTCTCGCGCGCTCTGTGC CAACCCTTGCAGAAATAAGAGGAAATGGGCTTTCTGCTACCGCTCGACCG CTCTCGTTGTTGGGATGTCGGCAACGCAGCGAGTCGAGAGTTTTTTCGGC GTCTTGAAGCGCGTCATACATGGCAGCGGTTCCCTTGTCATGCTAGGCCA AACAGTACGAGATTTGTGTGACTCGCGTGTGACTCGCAGGAGGTCGAAAC GAACAGGTGCGCTGTGTTTGGAGAGTACCGGAAGCGTAGTAAACGCCTCA AAGACCTGGCGCACATGGTTCGTGTAAGATTAATGTTAAAGGCCAATGTT CAATTTTTGATCACCTACAAGTCCACAAGCAAGTTTGTGTTCGCAACGTA TCGTTTGGCGAACCTTTCTCAACCTTCTACAGACTTGGAGCGCCACAGGT GGTGGACGGCTACAAATTTATCGATAGGCATACTGAGTCGCTCTTTCAGC CGATCCTCGCGCAGCTAAAGACGTGCGGTGCAAGTTCCTTCGTCACCCAG GTTGGTAGTTTTGCTGTCGACACTCCTTGTGTGCGGGATTCACTATCGGG TCCCCAGTGTAGACGCGTCCATTGGATTGATTAATTATTCACTCGGTTTG CCAATAGTTCCTTGTAGTTCCTTTCCCGTCCCGTTTTGACATATTTGAAG TACATCGTGTGAGTTGAGACATTATTCTCGAGACGTTTTTCTCGGTGTCG TTGACCACCTCTTCCTCCCGACATGATCCGTGCATCTTCCCAACTGCGCA GCGTATCCGACGCGAGTTCGGATCCGCGGTGGCATACAATGCCACAGTCT TAGCGTCTTACAGCGAGGAAGTCGAGGACGTTCTACGTGGCCTGGTGACA TCGCAACCTCTCATTAATTTGTGCCACGCGCAAGCGGGCACAGAGCTGGT GGACCTACAAGTTACCACGGGAAGGACTCGGGAGGACCTGAGCATGTATG CGAGGACATCGCTACGAGCTTTTGTCGACCTTCGTGAGGGGTCTGATGAA GTAATCAAGCATGTGGTTCGCGTCTCTTACAAATTGACGGCAACGGCGGC GAGCCACGTCGTTGTACTAGGGGCTGGGGGTGTTTACCTTTGCTCGTGTT TGCAGCTGCTGCAGCATGGGTTTTCATGCCGACATGTTTTCGCGGTGATG CAACTGCAGGGTCCGGCTTTGCCCAGCGCTTGCTGCACCTTTGATGCGAA TTGGTTGCACCCCCGGTGGCGAAATGTAAGGAGCCTGCAGGACGAAAAAT GGACCGCTTCTGAGTTGGTTCCTGATAAACACAAGTGGACTGCGGTTGGC GAGGGTCCACTTTGGGACGGCGGCGAAAATTTGCAGGGGGCGGGGCAATT GTCTGGGGGGGAGGATGATGAGAGGGACTCAAGCCCTAAAGTGTCTGAAG GGGCAAGAAGGAAGACCTACGCTGATGGCCTTGCCACGACAAGAGAAATG GTGGCTGAAGTTGTAGATTCAGTAAGCCCTGCAGTCGCACTAGATATTTT CTCTGCCGTACGGGAAGTGGCTGATAGTAGACTGCGTGCCGAAGGAGTTT TACGTGTCGTGACTCCAGACTTGACTGGTGGAAGCGGACAGGGGGCGCTG CAAAACGCCAAACCAGCGCTCACAAAGGGTAGGAAAAAAAACAAAATGCA CAAGAGTTCGACGGAGCGAAGATGAAGTTCTTCAAACTTTGTTGATAACT TCATCGCTAAACTTATGGTGCCATTGGACTTCGGGTTTGGAGTAAAACAC GGCGGGGATAATTAGTGGACAAAATAGGTTGTCTACTTTGAGTTGGTTCA ATAGTGGATATTTGGGTTAGTTGTGCCTGCTAAGAATAATATTAGAACAA GCCGTAAACACTTCTTCGTATATAGGTAGGTGTTTGTGGGCATCGTAGTT TGTCGGTCAAAGATACAGCTTCAAACAAAAAACATGGGTGATCTTTAACG TTACAGAAGGTATGGTACATGACATGTCGTGTGTTTGGCTCTCTCTCTGG ACATGTATCTCATATGTTGCATGTGTTCGATGGCAACCCTTCCTTTCTGT GGGGGGCCTGATATCATAGATGCTGACTTGGCGCACAAGAAGGAGTCAAA CAAAAAGGTCGCCGTTTG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig151:474421..481438-

>mRNA_P-littoralis_Contig151.76.1 ID=mRNA_P-littoralis_Contig151.76.1|Name=mRNA_P-littoralis_Contig151.76.1|organism=Pylaiella littoralis U1_48|type=CDS|length=732bp|location=Sequence derived from alignment at P-littoralis_Contig151:474421..481438- (Pylaiella littoralis U1_48)
ATGTATGCGAGGACATCGCTACGAGCTTTTGTCGACCTTCGTGAGGGGTC
TGATGAAGTAATCAAGCATGTGGTTCGCGTCTCTTACAAATTGACGGCAA
CGGCGGCGAGCCACGTCGTTGTACTAGGGGCTGGGGGTGTTTACCTTTGC
TCGTGTTTGCAGCTGCTGCAGCATGGGTTTTCATGCCGACATGTTTTCGC
GGTGATGCAACTGCAGGGTCCGGCTTTGCCCAGCGCTTGCTGCACCTTTG
ATGCGAATTGGTTGCACCCCCGGTGGCGAAATGTAAGGAGCCTGCAGGAC
GAAAAATGGACCGCTTCTGAGTTGGTTCCTGATAAACACAAGTGGACTGC
GGTTGGCGAGGGTCCACTTTGGGACGGCGGCGAAAATTTGCAGGGGGCGG
GGCAATTGTCTGGGGGGGAGGATGATGAGAGGGACTCAAGCCCTAAAGTG
TCTGAAGGGGCAAGAAGGAAGACCTACGCTGATGGCCTTGCCACGACAAG
AGAAATGGTGGCTGAAGTTGTAGATTCAGTAAGCCCTGCAGTCGCACTAG
ATATTTTCTCTGCCGTACGGGAAGTGGCTGATAGTAGACTGCGTGCCGAA
GGAGTTTTACGTGTCGTGACTCCAGACTTGACTGGTGGAAGCGGACAGGG
GGCGCTGCAAAACGCCAAACCAGCGCTCACAAAGGGTAGGAAAAAAAACA
AAATGCACAAGAGTTCGACGGAGCGAAGATGA
back to top