prot_P-fluviatile_contig22.4790.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig22.4790.1
Unique Nameprot_P-fluviatile_contig22.4790.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length86
Homology
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BLAST of mRNA_P-fluviatile_contig22.4790.1 vs. uniprot
Match: D7G712_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G712_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 7.870e-30
Identity = 57/76 (75.00%), Postives = 65/76 (85.53%), Query Frame = 0 
Query:    1 MDEIDSALDTHKVARVAAMLADRTRGGNEQCIVISHRPEMHERGSHLIGVYHCEGTARTVGLELVSQLPPAPDDEE 76
            MDEIDSALDTHKV RVA++LADR + G+EQCIVISHR EM ERGSHL+GVYHC+GTARTVGLEL  Q+P   D+ E
Sbjct: 1251 MDEIDSALDTHKVRRVASILADRAQSGSEQCIVISHRAEMQERGSHLVGVYHCDGTARTVGLELHPQMPQGHDENE 1326
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BLAST of mRNA_P-fluviatile_contig22.4790.1 vs. uniprot
Match: A0A8K1CE18_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CE18_PYTOL)

HSP 1 Score: 51.2 bits (121), Expect = 1.760e-5
Identity = 23/63 (36.51%), Postives = 39/63 (61.90%), Query Frame = 0 
Query:    2 DEIDSALDTHKVARVAAMLADRTRGGNEQCIVISHRPEMHERGSHLIGVYHCEGTARTVGLEL 64
            DEID+ALDT  V+++  +L  ++     Q +++SHRPEM E  S+L+G+Y  + +A  +    
Sbjct:  861 DEIDAALDTINVSKLGKLLLQQSEKTKTQFLIVSHRPEMWELCSYLVGIYERDHSACAIACHF 923
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BLAST of mRNA_P-fluviatile_contig22.4790.1 vs. uniprot
Match: A0A1V9ZUI8_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZUI8_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 6.250e-5
Identity = 23/50 (46.00%), Postives = 36/50 (72.00%), Query Frame = 0 
Query:    2 DEIDSALDTHKVARVAAMLADRTRGGNEQCIVISHRPEMHERGSHLIGVY 51
            DEID++LDTH VAR+  +++     G+ Q +V+SHR EM ++ S ++GVY
Sbjct: 1577 DEIDASLDTHNVARLGQLMS--RLAGDTQFVVVSHRAEMWQQSSAMVGVY 1624
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig22.4790.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G712_ECTSI7.870e-3075.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8K1CE18_PYTOL1.760e-536.51Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1V9ZUI8_9STRA6.250e-546.00DEAD/DEAH box RNA helicase n=1 Tax=Achlya hypogyna... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..73
e-value: 8.9E-15
score: 56.6
IPR003395RecF/RecN/SMC, N-terminalPFAMPF02463SMC_Ncoord: 1..56
e-value: 2.2E-11
score: 43.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig22contigP-fluviatile_contig22:699471..701700 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig22.4790.1mRNA_P-fluviatile_contig22.4790.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig22 699317..702624 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig22.4790.1 ID=prot_P-fluviatile_contig22.4790.1|Name=mRNA_P-fluviatile_contig22.4790.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=86bp
MDEIDSALDTHKVARVAAMLADRTRGGNEQCIVISHRPEMHERGSHLIGV
YHCEGTARTVGLELVSQLPPAPDDEESGSSQSSPP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003395RecF/RecN/SMC_N
IPR027417P-loop_NTPase