mRNA_P-fluviatile_contig22.4790.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig22.4790.1 vs. uniprot
Match: D7G712_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G712_ECTSI) HSP 1 Score: 209 bits (533), Expect = 1.060e-55 Identity = 104/127 (81.89%), Postives = 113/127 (88.98%), Query Frame = 2
Query: 2 LLLSEGLAVQVKPEPSSPWRGPGSLSGGQVALVGLALNLATQAVRPAPLYLMDEIDSALDTHKVARVAAMLADRTRGGNEQCIVISHRPEMHERGSHLIGVYHCEGTARTVGLELVSQLPPAPDDEE 382
LL SEGL+VQVKPE SPWRGPGSLSGGQVALVGLALNLATQAVRPAPLYLMDEIDSALDTHKV RVA++LADR + G+EQCIVISHR EM ERGSHL+GVYHC+GTARTVGLEL Q+P D+ E
Sbjct: 1200 LLASEGLSVQVKPEAMSPWRGPGSLSGGQVALVGLALNLATQAVRPAPLYLMDEIDSALDTHKVRRVASILADRAQSGSEQCIVISHRAEMQERGSHLVGVYHCDGTARTVGLELHPQMPQGHDENE 1326
BLAST of mRNA_P-fluviatile_contig22.4790.1 vs. uniprot
Match: A0A059LCK1_9CHLO (RecF/RecN/SMC N terminal domain-containing protein (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LCK1_9CHLO) HSP 1 Score: 85.1 bits (209), Expect = 8.860e-16 Identity = 48/130 (36.92%), Postives = 72/130 (55.38%), Query Frame = 2
Query: 11 SEGLAVQVKPEPSSPWRGPGSLSGGQVALVGLALNLATQAVRPAPLYLMDEIDSALDTHKVARVAAMLADRTRGGNEQCIVISHRPEMHERGSHLIGVYHCEGTARTVGLE---LVSQLPPAPDDEESGS 391
+EG+A+ V+P P W+ +LSGG+ L L+L A RP P+Y+MDEID+ALD V+ V + DRT+ N Q +VIS R M E L+G+Y ++V ++ P A D+ +G+
Sbjct: 43 AEGVALSVRP-PGKSWKNVSNLSGGEKTLSSLSLVFALHHFRPTPIYVMDEIDAALDFRNVSVVGHYIKDRTK--NAQFVVISLRNNMFELADRLVGIYKTHNATKSVSIDPRAFAKDRPEAADENRAGN 169
BLAST of mRNA_P-fluviatile_contig22.4790.1 vs. uniprot
Match: A0A1Y3N8Z4_PIRSE (SMC_N domain-containing protein n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3N8Z4_PIRSE) HSP 1 Score: 86.3 bits (212), Expect = 1.290e-15 Identity = 50/118 (42.37%), Postives = 65/118 (55.08%), Query Frame = 2
Query: 11 SEGLAVQVKPEPSSPWRGPGSLSGGQVALVGLALNLATQAVRPAPLYLMDEIDSALDTHKVARVAAMLADRTRGGNEQCIVISHRPEMHERGSHLIGVYHCEGTARTVGLELVSQLPP 364
SEG+ V P P W+ +LSGG+ L LAL A +P PLY+MDEID+ALD V+ VA + DRT+ N Q I+IS R M E LIG+Y +T+ + LPP
Sbjct: 20 SEGIIFSVMP-PKKSWKNISNLSGGEKTLSSLALVFALHHYKPTPLYIMDEIDAALDFRNVSIVANYIKDRTK--NAQFIIISLRNNMFELADRLIGIYKTHNCTKTITINPTEILPP 134
BLAST of mRNA_P-fluviatile_contig22.4790.1 vs. uniprot
Match: A0A0F7SA36_9BASI (Structural maintenance of chromosomes protein 4 n=5 Tax=Sporisorium TaxID=63265 RepID=A0A0F7SA36_9BASI) HSP 1 Score: 90.1 bits (222), Expect = 2.020e-15 Identity = 53/131 (40.46%), Postives = 75/131 (57.25%), Query Frame = 2
Query: 11 SEGLAVQVKPEPSSPWRGPGSLSGGQVALVGLALNLATQAVRPAPLYLMDEIDSALDTHKVARVAAMLADRTRGGNEQCIVISHRPEMHERGSHLIGVYHCEGTARTVGLELVSQLPPAPDDEESGSSQSS 403
+EG+ V P P W+ +LSGG+ L LAL A A +P P+Y+MDEID+ALD V+ VA ++ +RT+GG Q I+IS R M E S LIGVY +++ ++ L P P +G S+ S
Sbjct: 1213 AEGILFSVMP-PKKSWKNISNLSGGEKTLSSLALVFALHAYKPTPVYVMDEIDAALDFRNVSIVANLIKERTKGG--QFIIISLRNNMFELSSRLIGVYKTANCTKSLTIDNTELLAPPPTPTPAGHSRPS 1340
BLAST of mRNA_P-fluviatile_contig22.4790.1 vs. uniprot
Match: B3S7L9_TRIAD (SMC_N domain-containing protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3S7L9_TRIAD) HSP 1 Score: 84.7 bits (208), Expect = 2.240e-15 Identity = 48/111 (43.24%), Postives = 67/111 (60.36%), Query Frame = 2
Query: 11 SEGLAVQVKPEPSSPWRGPGSLSGGQVALVGLALNLATQAVRPAPLYLMDEIDSALDTHKVARVAAMLADRTRGGNEQCIVISHRPEMHERGSHLIGVYHCEGTARTVGLE 343
SEG+A V+P P W+ +LSGG+ L LAL A +P+PLY+MDEID+ALD V+ VA + +RT+ N Q I+IS R M E LIG+Y + +TV ++
Sbjct: 86 SEGIAFSVRP-PKKSWKNISNLSGGEKTLSSLALVFALHHFKPSPLYVMDEIDAALDFKNVSIVANYIKERTK--NAQFIIISLRNNMFELADRLIGIYKTDNATKTVVID 193
BLAST of mRNA_P-fluviatile_contig22.4790.1 vs. uniprot
Match: G2YVW4_BOTF4 (SMC_N domain-containing protein n=2 Tax=leotiomyceta TaxID=716546 RepID=G2YVW4_BOTF4) HSP 1 Score: 82.8 bits (203), Expect = 3.500e-15 Identity = 49/111 (44.14%), Postives = 65/111 (58.56%), Query Frame = 2
Query: 11 SEGLAVQVKPEPSSPWRGPGSLSGGQVALVGLALNLATQAVRPAPLYLMDEIDSALDTHKVARVAAMLADRTRGGNEQCIVISHRPEMHERGSHLIGVYHCEGTARTVGLE 343
SEG+ V P P W+ +LSGG+ L LAL A +P PLY+MDEID+ALD V+ VA+ + +RT+ N Q IVIS R M E S L+GVY ++V +E
Sbjct: 36 SEGILFSVMP-PKKSWKNISNLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFRNVSIVASYIKERTK--NAQFIVISLRNNMFELASRLVGVYKVNHMTKSVTIE 143
BLAST of mRNA_P-fluviatile_contig22.4790.1 vs. uniprot
Match: A0A2V1CQJ7_9HELO (P-loop containing nucleoside triphosphate hydrolase protein n=2 Tax=sordariomyceta TaxID=715989 RepID=A0A2V1CQJ7_9HELO) HSP 1 Score: 82.8 bits (203), Expect = 3.670e-15 Identity = 49/111 (44.14%), Postives = 65/111 (58.56%), Query Frame = 2
Query: 11 SEGLAVQVKPEPSSPWRGPGSLSGGQVALVGLALNLATQAVRPAPLYLMDEIDSALDTHKVARVAAMLADRTRGGNEQCIVISHRPEMHERGSHLIGVYHCEGTARTVGLE 343
SEG+ V P P W+ +LSGG+ L LAL A +P PLY+MDEID+ALD V+ VA+ + +RT+ N Q IVIS R M E S L+GVY ++V +E
Sbjct: 36 SEGILFSVMP-PKKSWKNISNLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFRNVSIVASYIKERTK--NAQFIVISLRNNMFELASRLVGVYKVNHMTKSVTIE 143
BLAST of mRNA_P-fluviatile_contig22.4790.1 vs. uniprot
Match: I2CR95_NANGC (Structural maintenance of chromosome 4 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR95_NANGC) HSP 1 Score: 84.3 bits (207), Expect = 4.620e-15 Identity = 47/110 (42.73%), Postives = 63/110 (57.27%), Query Frame = 2
Query: 11 SEGLAVQVKPEPSSPWRGPGSLSGGQVALVGLALNLATQAVRPAPLYLMDEIDSALDTHKVARVAAMLADRTRGGNEQCIVISHRPEMHERGSHLIGVYHCEGTARTVGL 340
SEG+ V+P P W+ +LSGG+ L LAL A +P PLY+MDEID+ALD VA A L RT+ N Q ++IS R EM E LIG+Y C+ ++ +
Sbjct: 82 SEGIVFSVRP-PKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDYRNVAICANYLKQRTK--NAQFVIISLRSEMFELADRLIGIYKCQNATNSLTI 188
BLAST of mRNA_P-fluviatile_contig22.4790.1 vs. uniprot
Match: A0A151GAG9_9HYPO (Structural maintenance of chromosomes protein n=1 Tax=Drechmeria coniospora TaxID=98403 RepID=A0A151GAG9_9HYPO) HSP 1 Score: 88.6 bits (218), Expect = 6.370e-15 Identity = 55/133 (41.35%), Postives = 74/133 (55.64%), Query Frame = 2
Query: 11 SEGLAVQVKPEPSSPWRGPGSLSGGQVALVGLALNLATQAVRPAPLYLMDEIDSALDTHKVARVAAMLADRTRGGNEQCIVISHRPEMHERGSHLIGVYHCEGTARTVGLE---LVSQLPPAPDDEESGSSQS 400
SEG+ V P P W+ G+LSGG+ L LAL A +P PLY+MDEID+ALD V+ VA + +RT+ N Q +VIS R M E + L+GVY ++V +E +S+ PAP G QS
Sbjct: 1343 SEGILFSVMP-PKKSWKNIGNLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFRNVSIVANYIKERTK--NAQFVVISLRNNMFELAARLVGVYKVNHMTKSVTIENRDYISRPQPAPSQRPPGPGQS 1472
BLAST of mRNA_P-fluviatile_contig22.4790.1 vs. uniprot
Match: A0A5N6EWI9_9EURO (RecF/RecN/SMC N terminal domain-containing protein n=1 Tax=Aspergillus novoparasiticus TaxID=986946 RepID=A0A5N6EWI9_9EURO) HSP 1 Score: 85.1 bits (209), Expect = 6.730e-15 Identity = 50/111 (45.05%), Postives = 66/111 (59.46%), Query Frame = 2
Query: 11 SEGLAVQVKPEPSSPWRGPGSLSGGQVALVGLALNLATQAVRPAPLYLMDEIDSALDTHKVARVAAMLADRTRGGNEQCIVISHRPEMHERGSHLIGVYHCEGTARTVGLE 343
SEG+ V P P W+ G+LSGG+ L LAL A +P PLY+MDEID+ALD V+ VA+ + +RT+ N Q IVIS R M E S L+GVY ++V +E
Sbjct: 161 SEGILFSVMP-PKKSWKNIGNLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFRNVSIVASYIKERTK--NAQFIVISLRNNMFELASRLVGVYKVNHKTKSVTIE 268 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig22.4790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig22.4790.1 >prot_P-fluviatile_contig22.4790.1 ID=prot_P-fluviatile_contig22.4790.1|Name=mRNA_P-fluviatile_contig22.4790.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=86bp MDEIDSALDTHKVARVAAMLADRTRGGNEQCIVISHRPEMHERGSHLIGVback to top mRNA from alignment at P-fluviatile_contig22:699317..702624+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig22.4790.1 ID=mRNA_P-fluviatile_contig22.4790.1|Name=mRNA_P-fluviatile_contig22.4790.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3308bp|location=Sequence derived from alignment at P-fluviatile_contig22:699317..702624+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig22:699317..702624+ >mRNA_P-fluviatile_contig22.4790.1 ID=mRNA_P-fluviatile_contig22.4790.1|Name=mRNA_P-fluviatile_contig22.4790.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=516bp|location=Sequence derived from alignment at P-fluviatile_contig22:699317..702624+ (Porterinema fluviatile SAG_2381)back to top |