mRNA_P-fluviatile_contig21.4633.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig21.4633.1 vs. uniprot
Match: D7G223_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G223_ECTSI) HSP 1 Score: 243 bits (621), Expect = 8.850e-73 Identity = 114/150 (76.00%), Postives = 129/150 (86.00%), Query Frame = 3
Query: 54 MRDDARIVRQVKAWVRDVVVKLRLCPFAEAVFKTKSGVRYVVSPATNVAEVWRDFLQEVHYLMDHDREEVGTTLLIAPNCMAQLQDFNDFTQWLEETIEGDEILVDQVLVACFHPRHAFHGLEEDDVLNFEKRSPYPTINLLRYVNTWGE 503
+ DDARI+RQ KAWVRDVVVKLRLCPFAEAVF +SGVRYVV+PA EVWR+FL EV +LMDHDRE+VGTTLLIAP ++ ++FNDF +WLEETIE DE LVDQVLVACFHPRHAFHGLE+DDVLN+EKRSP+PTINLLR TW E
Sbjct: 71 LEDDARIIRQAKAWVRDVVVKLRLCPFAEAVFNARSGVRYVVTPAETTDEVWREFLLEVDFLMDHDREDVGTTLLIAPRFLSDFREFNDFCRWLEETIEDDEALVDQVLVACFHPRHAFHGLEQDDVLNYEKRSPHPTINLLRCCTTWHE 220
BLAST of mRNA_P-fluviatile_contig21.4633.1 vs. uniprot
Match: A0A6H5KV68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV68_9PHAE) HSP 1 Score: 234 bits (597), Expect = 8.330e-69 Identity = 110/143 (76.92%), Postives = 124/143 (86.71%), Query Frame = 3
Query: 54 MRDDARIVRQVKAWVRDVVVKLRLCPFAEAVFKTKSGVRYVVSPATNVAEVWRDFLQEVHYLMDHDREEVGTTLLIAPNCMAQLQDFNDFTQWLEETIEGDEILVDQVLVACFHPRHAFHGLEEDDVLNFEKRSPYPTINLLR 482
+ DDARIVRQ KAWVRDVVVKLRLCPFAEAVF + GVRYVV+PA EVWR+FL EV +LMDHDRE+VGTTLLIAP ++ ++FNDF +WLEE IE DE LVDQVLVACFHPRHAFHGLE+DDVLN+EKRSP+PTINLLR
Sbjct: 71 LEDDARIVRQAKAWVRDVVVKLRLCPFAEAVFNARRGVRYVVTPAETTDEVWREFLLEVDFLMDHDREDVGTTLLIAPRFLSDFREFNDFCRWLEEAIENDEALVDQVLVACFHPRHAFHGLEQDDVLNYEKRSPHPTINLLR 213
BLAST of mRNA_P-fluviatile_contig21.4633.1 vs. uniprot
Match: UPI0019B9BE46 (DUF1415 domain-containing protein n=1 Tax=Ramlibacter sp. TaxID=1917967 RepID=UPI0019B9BE46) HSP 1 Score: 114 bits (285), Expect = 2.260e-25 Identity = 64/143 (44.76%), Postives = 85/143 (59.44%), Query Frame = 3
Query: 63 DAR---IVRQVKAWVRDVVVKLRLCPFAEAVFKTKSGVRYVVSPATNVAEVWRDFLQEVHYLMDHDREEVGTTLLIAPNCMAQLQDFNDFTQWLEETIEGDEILVDQVLVACFHPRHAFHGLEEDDVLNFEKRSPYPTINLLR 482
DAR +VR + W+ VV+ L LCPFA+AV K + Y VS AT E+ E+ L+ D E++ TTLLIAPNC+A DFNDF + E + + L + +A FH R+ F G E DDV NF R+PYPT++LLR
Sbjct: 16 DARAEGVVRDTRQWLERVVIGLNLCPFAKAVH-VKGQIHYTVSEATQPGELLDHLRVELDALVASDVEQIETTLLIAPNCLADFLDFNDFLELAERVVRKRK-LEGVIQLATFHARYQFAGTEADDVTNFTNRAPYPTLHLLR 156
BLAST of mRNA_P-fluviatile_contig21.4633.1 vs. uniprot
Match: A0A6U6AQE9_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A6U6AQE9_GUITH) HSP 1 Score: 114 bits (284), Expect = 1.250e-24 Identity = 63/146 (43.15%), Postives = 94/146 (64.38%), Query Frame = 3
Query: 57 RDDARI-VRQVKAWVRDVVVKLRLCPFAEAVFKTKSGVRYVVSPATNVAEVWRDFLQEVHYLMDHDREEVGTTLLIAPNCMAQLQDFNDFTQWLEETI---EGDEILVDQVLVACFHPRHAFHGLEEDDVLNFEKRSPYPTINLLR 482
RD+ +I + Q +AWV++++V+L LCPFA F+ K VRY +S A E+ D LQE L+D D EE TTLL+AP L+D+++ +LEE I E D +L +V +A FHP F+ ++ +D ++FE+R+P PTI+LLR
Sbjct: 59 RDEDKIMIAQTRAWVKEMIVELNLCPFARTPFQ-KDTVRYSISNAQKEKELIDDILQEACKLLDDDPEETATTLLLAPYWADALEDWSELGYFLEEEIFDKEDDPLLEGRVGIAFFHPNWTFNEMDNNDPIHFERRAPIPTISLLR 203
BLAST of mRNA_P-fluviatile_contig21.4633.1 vs. uniprot
Match: A0A1J5C1N6_9BURK (Peptidase n=3 Tax=Betaproteobacteria TaxID=28216 RepID=A0A1J5C1N6_9BURK) HSP 1 Score: 109 bits (273), Expect = 9.310e-24 Identity = 62/144 (43.06%), Postives = 83/144 (57.64%), Query Frame = 3
Query: 54 MRDDARIVRQVKAWVRDVVVKLRLCPFAEAVFKTKSGVRYVVSPATNVAEVWRDFLQEVHYLMDHDREEVGTTLLIAPNCMAQLQDFNDFTQWLEETIEGDEILVDQVL-VACFHPRHAFHGLEEDDVLNFEKRSPYPTINLLR 482
M DA ++ +AW+ V+ L LCPFA++V K V Y VS AT ++ D + E+ L D + TTLLIAP C+ DFNDF + +E E+ D VL +A HPR+ F G EDD+ NF RSPYPT++LLR
Sbjct: 1 MTPDATVIADTRAWLERAVIGLNLCPFAKSVH-VKGQVHYAVSHATTRQDLLADLIIELKDLAATDAKLRDTTLLIAPECLQDFLDFNDFLAEADRALEDLEL--DGVLQIASLHPRYQFAGTAEDDITNFTNRSPYPTLHLLR 141
BLAST of mRNA_P-fluviatile_contig21.4633.1 vs. uniprot
Match: A0A2V3IJ06_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ06_9FLOR) HSP 1 Score: 109 bits (272), Expect = 1.520e-23 Identity = 65/150 (43.33%), Postives = 84/150 (56.00%), Query Frame = 3
Query: 39 ATSVVMRDDARIV-RQVKAWVRDVVVKLRLCPFAEAVFKTKSGVRYVVSPATNVAEVWRDFLQEVHYLMDHDREEVGTTLLIAPN-CMAQLQDFNDFTQWLEETIEGDEILVDQVLVACFHPRHAFHGLEEDDVLNFEKRSPYPTINLLR 482
A SV D A R WVR +V++ LCPFAE + VR VVS AT + F EV LM D +E+ TTL++ P+ F++F +E+ I D LVD VL+A FHP H + G+ D LNFEKR+PYPTIN+LR
Sbjct: 11 AESVNQSDSAGFAARGTMNWVRRIVIEKGLCPFAEPAVDS-DRVRLVVSSATCESTARDKFYTEVRLLMSADPDEIVTTLIVMPDFATTDFLRFHEFASDIEDEISEDVNLVDAVLIAAFHPMHRYEGMGADSALNFEKRAPYPTINILR 159
BLAST of mRNA_P-fluviatile_contig21.4633.1 vs. uniprot
Match: A0A317RF69_9BURK (Uncharacterized protein n=1 Tax=Melaminivora alkalimesophila TaxID=1165852 RepID=A0A317RF69_9BURK) HSP 1 Score: 109 bits (272), Expect = 1.860e-23 Identity = 59/140 (42.14%), Postives = 82/140 (58.57%), Query Frame = 3
Query: 63 DARIVRQVKAWVRDVVVKLRLCPFAEAVFKTKSGVRYVVSPATNVAEVWRDFLQEVHYLMDHDREEVGTTLLIAPNCMAQLQDFNDFTQWLEETIEGDEILVDQVLVACFHPRHAFHGLEEDDVLNFEKRSPYPTINLLR 482
DA +++ + W+ V+ L LCPFA+ V TK + YVVS AT+ + D QE+ L + E TTLL+AP+CM DFNDF + +E +E + L + VA FHPR F G +DV N R+PYPT++LLR
Sbjct: 17 DATVIQDMVRWLERAVIGLNLCPFAKGVH-TKDQIHYVVSHATDARGLLEDLRQELEALAESPPERRDTTLLMAPHCMEDFLDFNDFLELADELVEAMD-LAGILQVASFHPRFQFAGTAPEDVSNCTNRAPYPTLHLLR 154
BLAST of mRNA_P-fluviatile_contig21.4633.1 vs. uniprot
Match: A0A2R3Q9Y4_9BURK (DUF1415 domain-containing protein n=1 Tax=Melaminivora sp. SC2-9 TaxID=2109913 RepID=A0A2R3Q9Y4_9BURK) HSP 1 Score: 108 bits (269), Expect = 4.460e-23 Identity = 61/151 (40.40%), Postives = 87/151 (57.62%), Query Frame = 3
Query: 30 GVPATSVVMRDDARIVRQVKAWVRDVVVKLRLCPFAEAVFKTKSGVRYVVSPATNVAEVWRDFLQEVHYLMDHDREEVGTTLLIAPNCMAQLQDFNDFTQWLEETIEGDEILVDQVLVACFHPRHAFHGLEEDDVLNFEKRSPYPTINLLR 482
G PAT DA +V+ + W+ V+ L LCPFA+ V TK + Y VS AT+ ++ +D E+ L + ++ TTLL+AP+CM DFNDF + +E +E + L + VA FHP+ F G DDV N R+PYPT++LLR
Sbjct: 11 GTPAT------DAIVVQDMVRWLERAVIDLNLCPFAKGVH-TKGQIHYAVSHATDARDLLQDLAAELEALAEASPDKRDTTLLMAPHCMQDFLDFNDFLELADELVESMD-LAGILQVASFHPQFQFAGTAPDDVGNCTNRAPYPTLHLLR 153
BLAST of mRNA_P-fluviatile_contig21.4633.1 vs. uniprot
Match: A0A5C9CYJ4_9BURK (Uncharacterized protein n=2 Tax=Comamonadaceae TaxID=80864 RepID=A0A5C9CYJ4_9BURK) HSP 1 Score: 107 bits (267), Expect = 5.100e-23 Identity = 64/149 (42.95%), Postives = 86/149 (57.72%), Query Frame = 3
Query: 54 MRDDARIVRQVKAWVRDVVVKLRLCPFAEAVFKTKSGVRYVVSPATNVAEVWRD-FLQEVHYLMDHDREEVGTTLLIAPNCMAQLQDFNDFTQWLEETIEGDEILVDQVL-----VACFHPRHAFHGLEEDDVLNFEKRSPYPTINLLR 482
M + ++V+ AW+ V+ L LCPFA++V K V Y VS A N A+ +RD +QE+ L+ D + TTLLIAP C+ DFNDF +E D++LVD L +A HP + F G DDV NF RSPYPT++LLR
Sbjct: 1 MTPNEQVVQDTVAWLERAVIGLNLCPFAKSVH-VKGQVHYAVSQA-NTAQAFRDDLIQELKDLVALDAKARDTTLLIAPGCLEDFLDFNDFL------VEADQVLVDLELDGVLQIASLHPHYQFAGTSPDDVTNFTNRSPYPTLHLLR 141
BLAST of mRNA_P-fluviatile_contig21.4633.1 vs. uniprot
Match: A0A1I7JYZ5_9BURK (Uncharacterized protein n=3 Tax=Burkholderiales TaxID=80840 RepID=A0A1I7JYZ5_9BURK) HSP 1 Score: 106 bits (264), Expect = 1.360e-22 Identity = 57/137 (41.61%), Postives = 80/137 (58.39%), Query Frame = 3
Query: 72 IVRQVKAWVRDVVVKLRLCPFAEAVFKTKSGVRYVVSPATNVAEVWRDFLQEVHYLMDHDREEVGTTLLIAPNCMAQLQDFNDFTQWLEETIEGDEILVDQVLVACFHPRHAFHGLEEDDVLNFEKRSPYPTINLLR 482
++ W+ V+ L LCPFA+ V TK + YVVS AT+ + D +E+ L + E+ TTLL+AP C+ DFNDF + ++E +E + L + VA FHPR F G EDDV N R+PYPT++LLR
Sbjct: 12 VIADTVRWLERAVIGLNLCPFAKGVH-TKGQIHYVVSEATDARGLLEDLQRELEALAEISPEKRDTTLLMAPQCLEDFLDFNDFLELVDELVEAMD-LGGILQVASFHPRFQFDGTAEDDVTNATNRAPYPTLHLLR 146 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig21.4633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig21.4633.1 >prot_P-fluviatile_contig21.4633.1 ID=prot_P-fluviatile_contig21.4633.1|Name=mRNA_P-fluviatile_contig21.4633.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=353bp MRDDARIVRQVKAWVRDVVVKLRLCPFAEAVFKTKSGVRYVVSPATNVAEback to top mRNA from alignment at P-fluviatile_contig21:1828052..1832080- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig21.4633.1 ID=mRNA_P-fluviatile_contig21.4633.1|Name=mRNA_P-fluviatile_contig21.4633.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4029bp|location=Sequence derived from alignment at P-fluviatile_contig21:1828052..1832080- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig21:1828052..1832080- >mRNA_P-fluviatile_contig21.4633.1 ID=mRNA_P-fluviatile_contig21.4633.1|Name=mRNA_P-fluviatile_contig21.4633.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2118bp|location=Sequence derived from alignment at P-fluviatile_contig21:1828052..1832080- (Porterinema fluviatile SAG_2381)back to top |